Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997538

Identifier: 121997538

GI number: 121997538

Start: 830613

End: 831851

Strand: Reverse

Name: 121997538

Synonym: Hhal_0742

Alternate gene names: NA

Gene position: 831851-830613 (Counterclockwise)

Preceding gene: 121997541

Following gene: 121997537

Centisome position: 31.06

GC content: 69.98

Gene sequence:

>1239_bases
ATGGATTACCACCACCTCGACACCCTGCGCCGTCACCACCCGGCCTGGCGGCTGCTCGCTGCCGATAGCGCGCCGCTGGT
GCTCGGCTTCCTGCATCGTGCCTTCGTCGAGCCCAATTGCCGGGCGCGCGCCCAGGGGGAGCTGACCAACGCCCTGGAGG
ACTACCTGCACGGCCTGCGCGAGGAGTTGGGCGAGGCGGTCTATCCACGCTCGGCGGCGGAGTATCTCAATGACTGGGCG
GCGGACGAACGGGGCTGGCTGCGCAAGTTCTACCCGCCGAATACCGACGAGCCGCACTTCGATCTGACCCCGGCGACGGA
GACGGCGCTCGGCTGGCTCGACGAGCTCCAGGAGCGGCAGTTCGTGGGGGCGGAGTCGCGGCTGATGACGGTCTTCGATC
TGCTCCGTCAGGTGGTCCAGGGGGCGGAGACCGACCCCGAGGCGCGGATCGAGGCCCTGGAGCGCCGGCGTGCCGAGATC
GACGCCGAGATTGCCGCCATCCGCGATGGGCAGCTGGCGCTGCTGGACGAGACGCAGATCAAGGAGCGCTTCTACCAGGT
GGAGCGCACGGCCCGCGGGCTGCTCTCCGACTTCCGGCAGGTGGAGCAGAACTTCCGTGAACTCGACCGCCAGGTGCGCG
AGCGCATCACCACCTGGGGCGGCAGCAAGGGGGCGCTGCTCGGTGAGGTCTTCGGGGAGGCCGACGCCATCGCCGACTCG
GACCAGGGCAAGAGCTTCCGGGCCTTCTGGGGGTTTCTCATGTCGCCGGCGCGTCAGGAGGAGCTCACCGATCTGCTCGA
GCGCGTCCTGGAACTCGAACCGGTCCAGACCCTGGGGCCGGACCGCCGGCTGGCGCGCATCCACCACGACTGGTTGGATG
CCGGCGAGGAGACCCAGCGCACCGTCTCGCGGCTGTCGGCGCAGCTGCGCAAGTTCCTCGATGACCAGGCCTGGCTGGAG
AACCGCCGCATCATGGACCTGATCCAGGGGGTGGAGCAGCACGCCCTGGCCGTGCGCGATCACCCGCCTGGAGGATCGGA
TCGCCCAGCTCGACCGGACCTACGGCGAGCAGCAGGGCCAGCGCGACGAGCTCAAGCAGGCCATCGCCGACAATGGCGGG
GATCGCCTGGAGCGGCTCAAGGCGGAGATCGCCCGCAAGAGCGAGGAGAAGGAGCGGCGCAGCGCCAGTGCCCGCACCTA
CAACGAGCTGGCCCGCGCCCTGGGGCTGCCGCTGGCTGA

Upstream 100 bases:

>100_bases
ATCGCGGGTGCCGGCGAGTGGGTCGGCCCGTTGACGGCCGCCGCCGTTTCCGGTTCCCGTACCGGATCACCTTGGGGCAG
GATCAGCGAGCGAGCCGAGC

Downstream 100 bases:

>100_bases
GTCGGCGGAGGTCTTCCGCGCCAACCAGCAGGCAGCGGCCGGCGAGCGCGAGGCCGCCGAAGAGGCGCTGACCCGGCTCC
AGAACCAGCAAACCGAGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MDYHHLDTLRRHHPAWRLLAADSAPLVLGFLHRAFVEPNCRARAQGELTNALEDYLHGLREELGEAVYPRSAAEYLNDWA
ADERGWLRKFYPPNTDEPHFDLTPATETALGWLDELQERQFVGAESRLMTVFDLLRQVVQGAETDPEARIEALERRRAEI
DAEIAAIRDGQLALLDETQIKERFYQVERTARGLLSDFRQVEQNFRELDRQVRERITTWGGSKGALLGEVFGEADAIADS
DQGKSFRAFWGFLMSPARQEELTDLLERVLELEPVQTLGPDRRLARIHHDWLDAGEETQRTVSRLSAQLRKFLDDQAWLE
NRRIMDLIQGVEQHALAVRDHPPGGSDRPARPDLRRAAGPARRAQAGHRRQWRGSPGAAQGGDRPQERGEGAAQRQCPHL
QRAGPRPGAAAG

Sequences:

>Translated_412_residues
MDYHHLDTLRRHHPAWRLLAADSAPLVLGFLHRAFVEPNCRARAQGELTNALEDYLHGLREELGEAVYPRSAAEYLNDWA
ADERGWLRKFYPPNTDEPHFDLTPATETALGWLDELQERQFVGAESRLMTVFDLLRQVVQGAETDPEARIEALERRRAEI
DAEIAAIRDGQLALLDETQIKERFYQVERTARGLLSDFRQVEQNFRELDRQVRERITTWGGSKGALLGEVFGEADAIADS
DQGKSFRAFWGFLMSPARQEELTDLLERVLELEPVQTLGPDRRLARIHHDWLDAGEETQRTVSRLSAQLRKFLDDQAWLE
NRRIMDLIQGVEQHALAVRDHPPGGSDRPARPDLRRAAGPARRAQAGHRRQWRGSPGAAQGGDRPQERGEGAAQRQCPHL
QRAGPRPGAAAG
>Mature_412_residues
MDYHHLDTLRRHHPAWRLLAADSAPLVLGFLHRAFVEPNCRARAQGELTNALEDYLHGLREELGEAVYPRSAAEYLNDWA
ADERGWLRKFYPPNTDEPHFDLTPATETALGWLDELQERQFVGAESRLMTVFDLLRQVVQGAETDPEARIEALERRRAEI
DAEIAAIRDGQLALLDETQIKERFYQVERTARGLLSDFRQVEQNFRELDRQVRERITTWGGSKGALLGEVFGEADAIADS
DQGKSFRAFWGFLMSPARQEELTDLLERVLELEPVQTLGPDRRLARIHHDWLDAGEETQRTVSRLSAQLRKFLDDQAWLE
NRRIMDLIQGVEQHALAVRDHPPGGSDRPARPDLRRAAGPARRAQAGHRRQWRGSPGAAQGGDRPQERGEGAAQRQCPHL
QRAGPRPGAAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46729; Mature: 46729

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYHHLDTLRRHHPAWRLLAADSAPLVLGFLHRAFVEPNCRARAQGELTNALEDYLHGLR
CCCHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
EELGEAVYPRSAAEYLNDWAADERGWLRKFYPPNTDEPHFDLTPATETALGWLDELQERQ
HHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FVGAESRLMTVFDLLRQVVQGAETDPEARIEALERRRAEIDAEIAAIRDGQLALLDETQI
HCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHH
KERFYQVERTARGLLSDFRQVEQNFRELDRQVRERITTWGGSKGALLGEVFGEADAIADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
DQGKSFRAFWGFLMSPARQEELTDLLERVLELEPVQTLGPDRRLARIHHDWLDAGEETQR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCHHHHH
TVSRLSAQLRKFLDDQAWLENRRIMDLIQGVEQHALAVRDHPPGGSDRPARPDLRRAAGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCH
ARRAQAGHRRQWRGSPGAAQGGDRPQERGEGAAQRQCPHLQRAGPRPGAAAG
HHHHHHCCCHHCCCCCCCCCCCCCCHHHCCCCHHHCCCCHHHCCCCCCCCCC
>Mature Secondary Structure
MDYHHLDTLRRHHPAWRLLAADSAPLVLGFLHRAFVEPNCRARAQGELTNALEDYLHGLR
CCCHHHHHHHHHCCHHEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH
EELGEAVYPRSAAEYLNDWAADERGWLRKFYPPNTDEPHFDLTPATETALGWLDELQERQ
HHHHHHCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
FVGAESRLMTVFDLLRQVVQGAETDPEARIEALERRRAEIDAEIAAIRDGQLALLDETQI
HCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCHHHH
KERFYQVERTARGLLSDFRQVEQNFRELDRQVRERITTWGGSKGALLGEVFGEADAIADS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCC
DQGKSFRAFWGFLMSPARQEELTDLLERVLELEPVQTLGPDRRLARIHHDWLDAGEETQR
CCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHHHHCCCHHHHH
TVSRLSAQLRKFLDDQAWLENRRIMDLIQGVEQHALAVRDHPPGGSDRPARPDLRRAAGP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHCCH
ARRAQAGHRRQWRGSPGAAQGGDRPQERGEGAAQRQCPHLQRAGPRPGAAAG
HHHHHHCCCHHCCCCCCCCCCCCCCHHHCCCCHHHCCCCHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA