Definition Halorhodospira halophila SL1 chromosome, complete genome.
Accession NC_008789
Length 2,678,452

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The map label for this gene is 121997493

Identifier: 121997493

GI number: 121997493

Start: 777166

End: 777756

Strand: Reverse

Name: 121997493

Synonym: Hhal_0696

Alternate gene names: NA

Gene position: 777756-777166 (Counterclockwise)

Preceding gene: 121997494

Following gene: 121997491

Centisome position: 29.04

GC content: 61.08

Gene sequence:

>591_bases
ATGGGGGCGGTCAGTTCAGCCAGGGAGTGGGGCACGGATCGCGCGACAGGCGTGCGGCGCAAGGCAGTGGCCTTGGGCGC
TGCGCTTCTGGGCGTCTCGGTGATGGCCTTCGCGGAGCCCGAATCGGCTCGGGATACATTTACGACGGAGCTCACCGTGG
CCCAACCTATTGATATGCAGGAGAGCTGCGCCAACAGGGTCGTCCATCTGGGCCCCTTCGTGGCTGGGCAGCAGGATCTG
TCTATGGGGGAGAGGCAGGATCCGCCCATCTGCCTGGATTTCACCGGTGAGCCAGGGGCAGACTTCAAGGTGAGCTTTGA
CGGTGCCCATGACGCTGAGGGTGCGTGCAACGACCGAGGACAGGATGATGGTCAATATGAAGTCTACCCGTTGACCTCCG
ATCAGCATGGTGTCGATTCGATCGACCTCTGCGTGGCGCCGGAGTCCAACTCGAACTCTCACCGGTTCAACATGAATGAT
GGGGAAAAGCGGGTGCCGGTTGAGGCCTTCCTCAAGAAGGACCATATCCCCGAAGGAGCTTCCGGAGACTACTCTACAAC
CATCACGGCGACCGCGGAGTACGACCTCTGA

Upstream 100 bases:

>100_bases
GATCACCCACTGGCAGCATCAGGAAGAATTGGAACTGGCGGAAGAGGGTGACTGATGTCGGTTGCAGGCTGCTCTTGCAG
CGTGTTTTGAGGAGGGCCTT

Downstream 100 bases:

>100_bases
ATGGGGCGGGCGTCTATGCGCTAGGCCTCAGTAATCGGGGGAGCCGCTTCCCGCGGCTTGGTTTCTAGGCCGCCTCGCCG
GTCTCTGTCCGCATCGACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MGAVSSAREWGTDRATGVRRKAVALGAALLGVSVMAFAEPESARDTFTTELTVAQPIDMQESCANRVVHLGPFVAGQQDL
SMGERQDPPICLDFTGEPGADFKVSFDGAHDAEGACNDRGQDDGQYEVYPLTSDQHGVDSIDLCVAPESNSNSHRFNMND
GEKRVPVEAFLKKDHIPEGASGDYSTTITATAEYDL

Sequences:

>Translated_196_residues
MGAVSSAREWGTDRATGVRRKAVALGAALLGVSVMAFAEPESARDTFTTELTVAQPIDMQESCANRVVHLGPFVAGQQDL
SMGERQDPPICLDFTGEPGADFKVSFDGAHDAEGACNDRGQDDGQYEVYPLTSDQHGVDSIDLCVAPESNSNSHRFNMND
GEKRVPVEAFLKKDHIPEGASGDYSTTITATAEYDL
>Mature_195_residues
GAVSSAREWGTDRATGVRRKAVALGAALLGVSVMAFAEPESARDTFTTELTVAQPIDMQESCANRVVHLGPFVAGQQDLS
MGERQDPPICLDFTGEPGADFKVSFDGAHDAEGACNDRGQDDGQYEVYPLTSDQHGVDSIDLCVAPESNSNSHRFNMNDG
EKRVPVEAFLKKDHIPEGASGDYSTTITATAEYDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20987; Mature: 20856

Theoretical pI: Translated: 4.18; Mature: 4.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGAVSSAREWGTDRATGVRRKAVALGAALLGVSVMAFAEPESARDTFTTELTVAQPIDMQ
CCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEECCCCHH
ESCANRVVHLGPFVAGQQDLSMGERQDPPICLDFTGEPGADFKVSFDGAHDAEGACNDRG
HHHHCCEEEECCCCCCCHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
QDDGQYEVYPLTSDQHGVDSIDLCVAPESNSNSHRFNMNDGEKRVPVEAFLKKDHIPEGA
CCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCC
SGDYSTTITATAEYDL
CCCCEEEEEEEEECCC
>Mature Secondary Structure 
GAVSSAREWGTDRATGVRRKAVALGAALLGVSVMAFAEPESARDTFTTELTVAQPIDMQ
CCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCEEEEEEEECCCCHH
ESCANRVVHLGPFVAGQQDLSMGERQDPPICLDFTGEPGADFKVSFDGAHDAEGACNDRG
HHHHCCEEEECCCCCCCHHCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCCCCCCCCC
QDDGQYEVYPLTSDQHGVDSIDLCVAPESNSNSHRFNMNDGEKRVPVEAFLKKDHIPEGA
CCCCCEEEEEECCCCCCCCEEEEEECCCCCCCCEEECCCCCCCCCCHHHHHHHCCCCCCC
SGDYSTTITATAEYDL
CCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA