| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611748
Identifier: 121611748
GI number: 121611748
Start: 5359273
End: 5359611
Strand: Direct
Name: 121611748
Synonym: Veis_4846
Alternate gene names: NA
Gene position: 5359273-5359611 (Clockwise)
Preceding gene: 121611747
Following gene: 121611749
Centisome position: 96.27
GC content: 70.8
Gene sequence:
>339_bases GTGGCCATGGAAAATGCAGGCGCCGCAATGGGCATTCGCGTGCCACGCCCGATGGCCCGTTGCCCACGGCGCAGGAAGAA CCGGTGCTGGCCGGCGATCGCACCGCCGGCCACAGTGCGATGGCCCGGCGTTGCGCGCCGGCGCGCCAGGTCCACGGCCG GCCCGGAAAATCCGTCATTCCACCACCGCCGTGGCTGCTGCGCGCCGCCAGCGGCCGGGCTTGAAGGCCGGTGCCGGCCT ATAATCCCGGCACCCGTTTTGCGGTTGATCTACGAAGACCCCACGGGCAAGGCGCTGCGCGCGAACGCCCCGGAGCCGCA AGACTGCACGAACCGATGA
Upstream 100 bases:
>100_bases GGAAGAGGCGTTCTTTGAAGACCATTTCCATATGCTCGACCACTTTCTGAGCGTCACCAGCCCCCCGCCGATGCTGTTGT AGCTGCCGGCTGCGCCCCCG
Downstream 100 bases:
>100_bases AAGACTTGAGGGGATCGCCATGTGTGGGATAGCCGGTGTGGTCAACGCGACGGGGGTGACGAAAGACGATGTCTGGGCGA TGGTCGGGAGCATCAGATAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 112; Mature: 111
Protein sequence:
>112_residues MAMENAGAAMGIRVPRPMARCPRRRKNRCWPAIAPPATVRWPGVARRRARSTAGPENPSFHHRRGCCAPPAAGLEGRCRP IIPAPVLRLIYEDPTGKALRANAPEPQDCTNR
Sequences:
>Translated_112_residues MAMENAGAAMGIRVPRPMARCPRRRKNRCWPAIAPPATVRWPGVARRRARSTAGPENPSFHHRRGCCAPPAAGLEGRCRP IIPAPVLRLIYEDPTGKALRANAPEPQDCTNR >Mature_111_residues AMENAGAAMGIRVPRPMARCPRRRKNRCWPAIAPPATVRWPGVARRRARSTAGPENPSFHHRRGCCAPPAAGLEGRCRPI IPAPVLRLIYEDPTGKALRANAPEPQDCTNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12297; Mature: 12166
Theoretical pI: Translated: 11.95; Mature: 11.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.4 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 5.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 8.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMENAGAAMGIRVPRPMARCPRRRKNRCWPAIAPPATVRWPGVARRRARSTAGPENPSF CCCCCCCCEEECCCCCHHHHCCHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCC HHRRGCCAPPAAGLEGRCRPIIPAPVLRLIYEDPTGKALRANAPEPQDCTNR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCC >Mature Secondary Structure AMENAGAAMGIRVPRPMARCPRRRKNRCWPAIAPPATVRWPGVARRRARSTAGPENPSF CCCCCCCEEECCCCCHHHHCCHHHHCCCCCCCCCCCCEECCCHHHHHHHCCCCCCCCCC HHRRGCCAPPAAGLEGRCRPIIPAPVLRLIYEDPTGKALRANAPEPQDCTNR CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCEEECCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA