| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611747
Identifier: 121611747
GI number: 121611747
Start: 5358193
End: 5359254
Strand: Direct
Name: 121611747
Synonym: Veis_4845
Alternate gene names: NA
Gene position: 5358193-5359254 (Clockwise)
Preceding gene: 121611746
Following gene: 121611748
Centisome position: 96.25
GC content: 70.15
Gene sequence:
>1062_bases ATGCACGACACCGCCATCTACATCGGGCGTTTCCAGCCCGTGCACAACGGCCACCGGGTGTTGCTGCAACGCGCGCTGGC CAGTGCGCGGCAGGTCATCGTGGTGCTGGGCTCGGCCTGGCAGGCCCGCTCGCCGAAAAACCCCTTCACCTGGCAGGAGC GCGAGGCCATGCTGCGCGCCGTGCTGCCCGATGCCGACCAAGCGCGCGTGCAACTGCTGCCGGTGCGGGACTACTACAAC CAGGCCGTCTGGGTGCAGGCCGTGCACCGGGCGGTGGCGCCGTTCACGGCCGGCGGCGCGCGCATCGGACTGGTCGGCCA TTTCAAGGACGCCACCAGCAGCTACCTGAGCGCCTTCCCCGACTGGGAGTTGATGCCCGTGCAACGCCAGGGCCGTATCG ACGCCAGCGCCATCCGCGACGCCTACCTGGGCGCGACGCCGGCCAGCGTGCGCCCGGCGCTGGCCGCGCTGGCCGATGAG ATCCCCGCCAGCACCCTGGCCGCGCTGGAGTGCTTTGCGCAAACCCCGCCGTACCTCGCGCTGCAACAGGAATGGCGCAT GCTGCGCGACTACCGCCAGGCTTGGGCCGCCGCGCCCTGGCCGCCGGTGTTCGTGACGGTCGCCGCCGTGCTGCGCTGCC AAGACCAGGTGCTGCTGATCGGCCGTGCCCACGCACCCGGCAAAGGACTGCTGGCGTTGCCCGGTGGTTTTCTCGGGCCG CGGGAAACGCTGTGGCAGTCGTGCCTGCGCGCGTTGCGCGAGCAAACCCGGTGCCCATTGCCCGAGGCCCGGCTGCGCGC CGCGTTGCAATCCGTGGCCGTGTTCGACCATCCCGACCGCAGCCAGCGTGGGCGCAGCGTCACGCACACGCATTGCTTCG ACCTGGAAGACGCGCCCTTGCCGGTCGTCATGCCCGCCGTGCCGGCTGACGGCGACGCGCGGCCGTTGCAATGGACGCCG ATCGCGCAACTGGCGGGGCTGGAAGAGGCGTTCTTTGAAGACCATTTCCATATGCTCGACCACTTTCTGAGCGTCACCAG CCCCCCGCCGATGCTGTTGTAG
Upstream 100 bases:
>100_bases GCGATGCAACGCCGCGATGCGCTTCGATGGCCAGCGCAGACCGACAGATGATCGGTGACGCGACACGAGGGCTGGAGACA CCTACCGGAACCGGAGCGCC
Downstream 100 bases:
>100_bases CTGCCGGCTGCGCCCCCGGTGGCCATGGAAAATGCAGGCGCCGCAATGGGCATTCGCGTGCCACGCCCGATGGCCCGTTG CCCACGGCGCAGGAAGAACC
Product: cytidyltransferase-like protein
Products: NA
Alternate protein names: Nicotinamide-nucleotide adenylyltransferase; NAD(+) diphosphorylase; NAD(+) pyrophosphorylase; NMN adenylyltransferase; ADP compounds hydrolase [H]
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MHDTAIYIGRFQPVHNGHRVLLQRALASARQVIVVLGSAWQARSPKNPFTWQEREAMLRAVLPDADQARVQLLPVRDYYN QAVWVQAVHRAVAPFTAGGARIGLVGHFKDATSSYLSAFPDWELMPVQRQGRIDASAIRDAYLGATPASVRPALAALADE IPASTLAALECFAQTPPYLALQQEWRMLRDYRQAWAAAPWPPVFVTVAAVLRCQDQVLLIGRAHAPGKGLLALPGGFLGP RETLWQSCLRALREQTRCPLPEARLRAALQSVAVFDHPDRSQRGRSVTHTHCFDLEDAPLPVVMPAVPADGDARPLQWTP IAQLAGLEEAFFEDHFHMLDHFLSVTSPPPMLL
Sequences:
>Translated_353_residues MHDTAIYIGRFQPVHNGHRVLLQRALASARQVIVVLGSAWQARSPKNPFTWQEREAMLRAVLPDADQARVQLLPVRDYYN QAVWVQAVHRAVAPFTAGGARIGLVGHFKDATSSYLSAFPDWELMPVQRQGRIDASAIRDAYLGATPASVRPALAALADE IPASTLAALECFAQTPPYLALQQEWRMLRDYRQAWAAAPWPPVFVTVAAVLRCQDQVLLIGRAHAPGKGLLALPGGFLGP RETLWQSCLRALREQTRCPLPEARLRAALQSVAVFDHPDRSQRGRSVTHTHCFDLEDAPLPVVMPAVPADGDARPLQWTP IAQLAGLEEAFFEDHFHMLDHFLSVTSPPPMLL >Mature_353_residues MHDTAIYIGRFQPVHNGHRVLLQRALASARQVIVVLGSAWQARSPKNPFTWQEREAMLRAVLPDADQARVQLLPVRDYYN QAVWVQAVHRAVAPFTAGGARIGLVGHFKDATSSYLSAFPDWELMPVQRQGRIDASAIRDAYLGATPASVRPALAALADE IPASTLAALECFAQTPPYLALQQEWRMLRDYRQAWAAAPWPPVFVTVAAVLRCQDQVLLIGRAHAPGKGLLALPGGFLGP RETLWQSCLRALREQTRCPLPEARLRAALQSVAVFDHPDRSQRGRSVTHTHCFDLEDAPLPVVMPAVPADGDARPLQWTP IAQLAGLEEAFFEDHFHMLDHFLSVTSPPPMLL
Specific function: The Nudix hydrolase domain is active on ADP-ribose, (2')-phospho-ADP-ribose, IDP-ribose and NADPH [H]
COG id: COG1051
COG function: function code F; ADP-ribose pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 nudix hydrolase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR020084 - InterPro: IPR000086 - InterPro: IPR015797 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF00293 NUDIX [H]
EC number: =2.7.7.1 [H]
Molecular weight: Translated: 39062; Mature: 39062
Theoretical pI: Translated: 7.97; Mature: 7.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHDTAIYIGRFQPVHNGHRVLLQRALASARQVIVVLGSAWQARSPKNPFTWQEREAMLRA CCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHH VLPDADQARVQLLPVRDYYNQAVWVQAVHRAVAPFTAGGARIGLVGHFKDATSSYLSAFP HCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCC DWELMPVQRQGRIDASAIRDAYLGATPASVRPALAALADEIPASTLAALECFAQTPPYLA CCCEEECHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH LQQEWRMLRDYRQAWAAAPWPPVFVTVAAVLRCQDQVLLIGRAHAPGKGLLALPGGFLGP HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCH RETLWQSCLRALREQTRCPLPEARLRAALQSVAVFDHPDRSQRGRSVTHTHCFDLEDAPL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCC PVVMPAVPADGDARPLQWTPIAQLAGLEEAFFEDHFHMLDHFLSVTSPPPMLL CEEEECCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MHDTAIYIGRFQPVHNGHRVLLQRALASARQVIVVLGSAWQARSPKNPFTWQEREAMLRA CCCCEEEEECCCCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHH VLPDADQARVQLLPVRDYYNQAVWVQAVHRAVAPFTAGGARIGLVGHFKDATSSYLSAFP HCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHCC DWELMPVQRQGRIDASAIRDAYLGATPASVRPALAALADEIPASTLAALECFAQTPPYLA CCCEEECHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHH LQQEWRMLRDYRQAWAAAPWPPVFVTVAAVLRCQDQVLLIGRAHAPGKGLLALPGGFLGP HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCEEECCCCCCCH RETLWQSCLRALREQTRCPLPEARLRAALQSVAVFDHPDRSQRGRSVTHTHCFDLEDAPL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEECCCCCCC PVVMPAVPADGDARPLQWTPIAQLAGLEEAFFEDHFHMLDHFLSVTSPPPMLL CEEEECCCCCCCCCCCCCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8590279; 8905231; 10050763 [H]