| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is asnB [H]
Identifier: 121611749
GI number: 121611749
Start: 5359631
End: 5361385
Strand: Direct
Name: asnB [H]
Synonym: Veis_4847
Alternate gene names: 121611749
Gene position: 5359631-5361385 (Clockwise)
Preceding gene: 121611748
Following gene: 121611750
Centisome position: 96.28
GC content: 61.37
Gene sequence:
>1755_bases ATGTGTGGGATAGCCGGTGTGGTCAACGCGACGGGGGTGACGAAAGACGATGTCTGGGCGATGGTCGGGAGCATCAGATA CCGCGGCGTCGATGCACAAGCTGTCGAAGACCTGGGCGGTGCCATTGTCGGCAATGTCCTGCTGAAGATAGCCGCTCTCG AAAACGGCAGGCAACCGATGTCGAGCACCGACGGCAAGGTCTGGGTTGTCTTCAACGGCGAGATCTTCAATTTCATCGAG TTGCGCGAGCAGCTACAGGCCAAGGGCTACCGGTTCAAATCGCGCTGCGATACCGAGGTGCTGGTGCATCTGTGGTGCGA AAAGGGCGAACAGATGCTCGACGATCTGGTCGGCATGTTCGCCTTTTTCATCTGGGACCAGCGCACGCAGACCGGCATGC TGGCCCGCGACCGCCAGGGCATCAAGCCCTGCTTTTATGCGCCGTATCGCGGCGGCCTGGCGTTTGCCAGCGAGATCAAA GCCATCCTGGCGCTGCCAAAGTTCGAGCGCAAAGTCAACGAATCGGCGTTGGGCGATGTGTTCAGCTTCAACTACTGCCC ACCGCCGCAGACCTGCTTCGAAGGCATCCATCATCTGCCGCCGGGCTGTTTCATGCGTTACGGATCGGGCCGATTTTCCG AGCCTGTGCGCTACTGGCGCTGGCCGCTCGATGGCGAGCGCGTCGACGCCTCGCAGGCCGATCTGGAAAATGCGCTCGGC GAAGCCGTCAAGCTGCAAATGCGTTTTGAGGTCGATGGGGGGCTGTTTCTTTCGGGGGGCGTCGACTCTTCGGTCATCGC CCATCACTTGCTGCCCCAGTGGAAGCAGCCCCGGTTGGACGCCATCGGTCTGCGCATCGAAGAGCAAGGTTTTTCCGAAT ACGCTTACGCCGAGCGTGTGGCCACCGACCTGAACATCAACCTGAGCGCACTGGATATCCGACCGGCCGATATTGCGGAC ATTGCACGCTCGGTCGTGCGGCATGCCGAGCAGCCGCATGGCGACTTTTCGTTTTTCCTGTTCTACCTGCTGTCGCGCCG GGCGCACCAGATGGGCAAGGTCGTCATGTTCACGGGCGACGGCCCGGACGAGGTCATGCTGGGCTATCGCCACAACGCGC AATTTTTCTCCGGGATGACGCGCGCCCGGTTTTCGATGCGCGACTACTTCGACCTCATCAGCTACAGCACCCGGCAAGAG CGCCAGCGGGTGATGAGCCCGTCTTTTCTGCCCCACACCGAAGGCGCGTTCGACAGGTTCATGGGCATCATCGAACCCTT TGGCGGCTTGGAGCCGATGGAACAGGTCGCCGCCTACGAGTTGACCTCGCTGATGCCTGGCAACGACTCCCCCAAGAGCG ATCGCATGGGCGCCTGCTGGTCGATCGAAGGGCGCGCGCCCTTCCTGGACCACAGAGTCAGCGAATTGTTCGCGCGTTTG CCGATCCAGTCCAAGTTCCACCAAGGGGTGGGCAAGCATTTCCTCAAGCGGGTGGCGCAGAGCTATTACGACCACGACTT CGTGTTCCGGCCCAAGACCATGCCCACGCTACCGATCGGCGAGTGGATCAAAGGGCCGCTTTACCCATGGGCGCGCGACA TCCTGGCGCTACCCGATGGCGGCCGCTTCGATGCCAGCGGGCTGCAACACATGTTGCAAGAGCACCGCAGCGGCATGCAC AACCACACCAAGCCCCTGCGCACGCTGCTGATGACCAAACTGTGGCTGCAAGAGTTTTTCTCCGAGGGCGCTTGA
Upstream 100 bases:
>100_bases TTGCGGTTGATCTACGAAGACCCCACGGGCAAGGCGCTGCGCGCGAACGCCCCGGAGCCGCAAGACTGCACGAACCGATG AAAGACTTGAGGGGATCGCC
Downstream 100 bases:
>100_bases AGCGAGCAGCGGGCGGGAACCCTAGTGTCGCGTCACCGATCAGATGTCGTAGGCTGCGCGCAGCCAATACCGAGCGTATT GGCAAGCGATGCAACGCCGC
Product: asparagine synthase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 584; Mature: 584
Protein sequence:
>584_residues MCGIAGVVNATGVTKDDVWAMVGSIRYRGVDAQAVEDLGGAIVGNVLLKIAALENGRQPMSSTDGKVWVVFNGEIFNFIE LREQLQAKGYRFKSRCDTEVLVHLWCEKGEQMLDDLVGMFAFFIWDQRTQTGMLARDRQGIKPCFYAPYRGGLAFASEIK AILALPKFERKVNESALGDVFSFNYCPPPQTCFEGIHHLPPGCFMRYGSGRFSEPVRYWRWPLDGERVDASQADLENALG EAVKLQMRFEVDGGLFLSGGVDSSVIAHHLLPQWKQPRLDAIGLRIEEQGFSEYAYAERVATDLNINLSALDIRPADIAD IARSVVRHAEQPHGDFSFFLFYLLSRRAHQMGKVVMFTGDGPDEVMLGYRHNAQFFSGMTRARFSMRDYFDLISYSTRQE RQRVMSPSFLPHTEGAFDRFMGIIEPFGGLEPMEQVAAYELTSLMPGNDSPKSDRMGACWSIEGRAPFLDHRVSELFARL PIQSKFHQGVGKHFLKRVAQSYYDHDFVFRPKTMPTLPIGEWIKGPLYPWARDILALPDGGRFDASGLQHMLQEHRSGMH NHTKPLRTLLMTKLWLQEFFSEGA
Sequences:
>Translated_584_residues MCGIAGVVNATGVTKDDVWAMVGSIRYRGVDAQAVEDLGGAIVGNVLLKIAALENGRQPMSSTDGKVWVVFNGEIFNFIE LREQLQAKGYRFKSRCDTEVLVHLWCEKGEQMLDDLVGMFAFFIWDQRTQTGMLARDRQGIKPCFYAPYRGGLAFASEIK AILALPKFERKVNESALGDVFSFNYCPPPQTCFEGIHHLPPGCFMRYGSGRFSEPVRYWRWPLDGERVDASQADLENALG EAVKLQMRFEVDGGLFLSGGVDSSVIAHHLLPQWKQPRLDAIGLRIEEQGFSEYAYAERVATDLNINLSALDIRPADIAD IARSVVRHAEQPHGDFSFFLFYLLSRRAHQMGKVVMFTGDGPDEVMLGYRHNAQFFSGMTRARFSMRDYFDLISYSTRQE RQRVMSPSFLPHTEGAFDRFMGIIEPFGGLEPMEQVAAYELTSLMPGNDSPKSDRMGACWSIEGRAPFLDHRVSELFARL PIQSKFHQGVGKHFLKRVAQSYYDHDFVFRPKTMPTLPIGEWIKGPLYPWARDILALPDGGRFDASGLQHMLQEHRSGMH NHTKPLRTLLMTKLWLQEFFSEGA >Mature_584_residues MCGIAGVVNATGVTKDDVWAMVGSIRYRGVDAQAVEDLGGAIVGNVLLKIAALENGRQPMSSTDGKVWVVFNGEIFNFIE LREQLQAKGYRFKSRCDTEVLVHLWCEKGEQMLDDLVGMFAFFIWDQRTQTGMLARDRQGIKPCFYAPYRGGLAFASEIK AILALPKFERKVNESALGDVFSFNYCPPPQTCFEGIHHLPPGCFMRYGSGRFSEPVRYWRWPLDGERVDASQADLENALG EAVKLQMRFEVDGGLFLSGGVDSSVIAHHLLPQWKQPRLDAIGLRIEEQGFSEYAYAERVATDLNINLSALDIRPADIAD IARSVVRHAEQPHGDFSFFLFYLLSRRAHQMGKVVMFTGDGPDEVMLGYRHNAQFFSGMTRARFSMRDYFDLISYSTRQE RQRVMSPSFLPHTEGAFDRFMGIIEPFGGLEPMEQVAAYELTSLMPGNDSPKSDRMGACWSIEGRAPFLDHRVSELFARL PIQSKFHQGVGKHFLKRVAQSYYDHDFVFRPKTMPTLPIGEWIKGPLYPWARDILALPDGGRFDASGLQHMLQEHRSGMH NHTKPLRTLLMTKLWLQEFFSEGA
Specific function: Main asparagine synthetase in vegetative cells [H]
COG id: COG0367
COG function: function code E; Asparagine synthase (glutamine-hydrolyzing)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 glutamine amidotransferase type-2 domain [H]
Homologues:
Organism=Escherichia coli, GI1786889, Length=395, Percent_Identity=28.3544303797468, Blast_Score=111, Evalue=1e-25, Organism=Saccharomyces cerevisiae, GI6321563, Length=414, Percent_Identity=25.8454106280193, Blast_Score=98, Evalue=4e-21, Organism=Saccharomyces cerevisiae, GI6325403, Length=420, Percent_Identity=24.2857142857143, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI45553209, Length=401, Percent_Identity=25.4364089775561, Blast_Score=104, Evalue=2e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006426 - InterPro: IPR001962 - InterPro: IPR017932 - InterPro: IPR014729 [H]
Pfam domain/function: PF00733 Asn_synthase [H]
EC number: =6.3.5.4 [H]
Molecular weight: Translated: 66100; Mature: 66100
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGIAGVVNATGVTKDDVWAMVGSIRYRGVDAQAVEDLGGAIVGNVLLKIAALENGRQPM CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSTDGKVWVVFNGEIFNFIELREQLQAKGYRFKSRCDTEVLVHLWCEKGEQMLDDLVGMF CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AFFIWDQRTQTGMLARDRQGIKPCFYAPYRGGLAFASEIKAILALPKFERKVNESALGDV HHHHHCCCCCCCCHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHCHHHHHHHCHHHHHHH FSFNYCPPPQTCFEGIHHLPPGCFMRYGSGRFSEPVRYWRWPLDGERVDASQADLENALG HCCCCCCCHHHHHHHHHHCCCHHHEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHH EAVKLQMRFEVDGGLFLSGGVDSSVIAHHLLPQWKQPRLDAIGLRIEEQGFSEYAYAERV HHEEEEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCCCHHCCEEECCCCHHHHHHHHH ATDLNINLSALDIRPADIADIARSVVRHAEQPHGDFSFFLFYLLSRRAHQMGKVVMFTGD HHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECC GPDEVMLGYRHNAQFFSGMTRARFSMRDYFDLISYSTRQERQRVMSPSFLPHTEGAFDRF CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH MGIIEPFGGLEPMEQVAAYELTSLMPGNDSPKSDRMGACWSIEGRAPFLDHRVSELFARL HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC PIQSKFHQGVGKHFLKRVAQSYYDHDFVFRPKTMPTLPIGEWIKGPLYPWARDILALPDG CCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCCCCCHHHHHHEECCCC GRFDASGLQHMLQEHRSGMHNHTKPLRTLLMTKLWLQEFFSEGA CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MCGIAGVVNATGVTKDDVWAMVGSIRYRGVDAQAVEDLGGAIVGNVLLKIAALENGRQPM CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCC SSTDGKVWVVFNGEIFNFIELREQLQAKGYRFKSRCDTEVLVHLWCEKGEQMLDDLVGMF CCCCCEEEEEECCCHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHH AFFIWDQRTQTGMLARDRQGIKPCFYAPYRGGLAFASEIKAILALPKFERKVNESALGDV HHHHHCCCCCCCCHHHHCCCCCCCEECCCCCCHHHHHHHHHHHHCHHHHHHHCHHHHHHH FSFNYCPPPQTCFEGIHHLPPGCFMRYGSGRFSEPVRYWRWPLDGERVDASQADLENALG HCCCCCCCHHHHHHHHHHCCCHHHEECCCCCCCCCHHHHCCCCCCCCCCCHHHHHHHHHH EAVKLQMRFEVDGGLFLSGGVDSSVIAHHLLPQWKQPRLDAIGLRIEEQGFSEYAYAERV HHEEEEEEEEECCCEEEECCCCHHHHHHHHCCCCCCCCCCHHCCEEECCCCHHHHHHHHH ATDLNINLSALDIRPADIADIARSVVRHAEQPHGDFSFFLFYLLSRRAHQMGKVVMFTGD HHCCCCEEEEEECCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECC GPDEVMLGYRHNAQFFSGMTRARFSMRDYFDLISYSTRQERQRVMSPSFLPHTEGAFDRF CCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHH MGIIEPFGGLEPMEQVAAYELTSLMPGNDSPKSDRMGACWSIEGRAPFLDHRVSELFARL HHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHHHC PIQSKFHQGVGKHFLKRVAQSYYDHDFVFRPKTMPTLPIGEWIKGPLYPWARDILALPDG CCHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCHHHHCCCCCHHHHHHEECCCC GRFDASGLQHMLQEHRSGMHNHTKPLRTLLMTKLWLQEFFSEGA CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377; 8755891; 10498721 [H]