| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is fba [H]
Identifier: 121611653
GI number: 121611653
Start: 5238590
End: 5239654
Strand: Direct
Name: fba [H]
Synonym: Veis_4747
Alternate gene names: 121611653
Gene position: 5238590-5239654 (Clockwise)
Preceding gene: 121611651
Following gene: 121611654
Centisome position: 94.11
GC content: 64.98
Gene sequence:
>1065_bases ATGCCCCTCGTTTCGATGCGCGAACTGCTCGACCATGCTGCCAGCAACGGCTATGGCATTCCGGCCTTCAACGTCAACAA CCTGGAACAGGTCCAGGCCGTGGTCGCCGCAGCCGATGAAGTCGGCGCCCCGGTGATCCTGCAAGCCAGCGCCGGTGCGC GCAAATACGCTGGCGCGTCGTTCATCAAGCATCTGATCCTGGCCGCCGCCGAAGCCTATCCGCATATTCCGCTGGTGATG CACCAGGACCATGGCGCATCGCCGCAGGTCTGCCAGGGCGCCATCGATCTGGGTTTTGGCTCGGTGATGATGGACGGCTC GCTGCTGGAAGATGGCAAGACCCCGGCCACGTTTGAATACAACGTCGCCGTGACGCGCCAAGTGGTACAGATGGCGCACC AGGTGGGCGTCACCGTCGAAGGCGAGCTCGGCTGCCTGGGCAACCTGGAAACCGGCGCTGCCGGCGAAGAAGACGGGGTC GGCGCCGAAGGCCGGCTCGAGCGCAGCCAGATGCTGACCGACCCCGAGGAGGCGGCCAGCTTCGTCAAGGCCACCCAGCT CGATGCGCTGGCAATTGCCATCGGCACCAGCCACGGCGCCTACAAATTCAGCCGCATCCCCAGCGCTGACATCCTGGCCA TCGACCGCGTCAAGCAAATCCACCAGCGCATCCCCAACACCCATCTGGTGATGCACGGCTCCTCGTCGGTGCCGGCGCCG CTGCTGGCCATCATCAACCAGTACGGCGGCAAGATCAAACAGACCTACGGCGTGCCGGTGGCGCAAATCCAGGAAGCCAT ACGGCATGGCGTGCGCAAGATCAATATCGACACCGATATCCGCCTGGCGATGACCGGCGCGGTGCGCCAATTCCTGCACG AAAACCCGGACAAATTCGATGCCCGCGAGTGGCTCAAGCCGGCCCGCGAAGCGGCCAAGGCGGTGTGCCGGCAGCGCTAC ATCGATTTCGGCTGCGAAGGCCAGGGCGCCAGGATCAAGGGGCACAGCCTGCAAGCGGTGGCCGCCCAGTACGCTGCGGG CACCTTGGCGCAGGTGGTGCACTGA
Upstream 100 bases:
>100_bases CCCCCGGCTAGAATTGCCGGTTACCAACCGGTTACCACCAGCGCGGCTGGCCCGCAGCCCCTTTGCCGACCTTGTCCCGA CCTTGAACGGAGTCTCGACC
Downstream 100 bases:
>100_bases TTTCCGGGCCATGGGGCCACGGCCCGGCGCCGGCCAGGGCGGCAACCCCCGGGATTTCTTCAGGTAAGCTCGCGGCCAGC CATTTCACTGCCCCATCGAG
Product: fructose-bisphosphate aldolase, class II
Products: NA
Alternate protein names: FBP aldolase; FBPA; Fructose-1,6-bisphosphate aldolase [H]
Number of amino acids: Translated: 354; Mature: 353
Protein sequence:
>354_residues MPLVSMRELLDHAASNGYGIPAFNVNNLEQVQAVVAAADEVGAPVILQASAGARKYAGASFIKHLILAAAEAYPHIPLVM HQDHGASPQVCQGAIDLGFGSVMMDGSLLEDGKTPATFEYNVAVTRQVVQMAHQVGVTVEGELGCLGNLETGAAGEEDGV GAEGRLERSQMLTDPEEAASFVKATQLDALAIAIGTSHGAYKFSRIPSADILAIDRVKQIHQRIPNTHLVMHGSSSVPAP LLAIINQYGGKIKQTYGVPVAQIQEAIRHGVRKINIDTDIRLAMTGAVRQFLHENPDKFDAREWLKPAREAAKAVCRQRY IDFGCEGQGARIKGHSLQAVAAQYAAGTLAQVVH
Sequences:
>Translated_354_residues MPLVSMRELLDHAASNGYGIPAFNVNNLEQVQAVVAAADEVGAPVILQASAGARKYAGASFIKHLILAAAEAYPHIPLVM HQDHGASPQVCQGAIDLGFGSVMMDGSLLEDGKTPATFEYNVAVTRQVVQMAHQVGVTVEGELGCLGNLETGAAGEEDGV GAEGRLERSQMLTDPEEAASFVKATQLDALAIAIGTSHGAYKFSRIPSADILAIDRVKQIHQRIPNTHLVMHGSSSVPAP LLAIINQYGGKIKQTYGVPVAQIQEAIRHGVRKINIDTDIRLAMTGAVRQFLHENPDKFDAREWLKPAREAAKAVCRQRY IDFGCEGQGARIKGHSLQAVAAQYAAGTLAQVVH >Mature_353_residues PLVSMRELLDHAASNGYGIPAFNVNNLEQVQAVVAAADEVGAPVILQASAGARKYAGASFIKHLILAAAEAYPHIPLVMH QDHGASPQVCQGAIDLGFGSVMMDGSLLEDGKTPATFEYNVAVTRQVVQMAHQVGVTVEGELGCLGNLETGAAGEEDGVG AEGRLERSQMLTDPEEAASFVKATQLDALAIAIGTSHGAYKFSRIPSADILAIDRVKQIHQRIPNTHLVMHGSSSVPAPL LAIINQYGGKIKQTYGVPVAQIQEAIRHGVRKINIDTDIRLAMTGAVRQFLHENPDKFDAREWLKPAREAAKAVCRQRYI DFGCEGQGARIKGHSLQAVAAQYAAGTLAQVVH
Specific function: Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3- phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis [H]
COG id: COG0191
COG function: function code G; Fructose/tagatose bisphosphate aldolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class II fructose-bisphosphate aldolase family [H]
Homologues:
Organism=Escherichia coli, GI87082041, Length=329, Percent_Identity=34.3465045592705, Blast_Score=175, Evalue=4e-45, Organism=Escherichia coli, GI1789526, Length=319, Percent_Identity=33.5423197492163, Blast_Score=164, Evalue=1e-41, Organism=Escherichia coli, GI1788072, Length=333, Percent_Identity=30.6306306306306, Blast_Score=123, Evalue=2e-29, Organism=Escherichia coli, GI1789293, Length=352, Percent_Identity=24.4318181818182, Blast_Score=89, Evalue=6e-19, Organism=Saccharomyces cerevisiae, GI6322790, Length=351, Percent_Identity=25.3561253561254, Blast_Score=75, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR006412 - InterPro: IPR000771 [H]
Pfam domain/function: PF01116 F_bP_aldolase [H]
EC number: =4.1.2.13 [H]
Molecular weight: Translated: 37719; Mature: 37588
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00602 ALDOLASE_CLASS_II_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLVSMRELLDHAASNGYGIPAFNVNNLEQVQAVVAAADEVGAPVILQASAGARKYAGAS CCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH FIKHLILAAAEAYPHIPLVMHQDHGASPQVCQGAIDLGFGSVMMDGSLLEDGKTPATFEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHCCCCHHCCCCCCCEEEE NVAVTRQVVQMAHQVGVTVEGELGCLGNLETGAAGEEDGVGAEGRLERSQMLTDPEEAAS HHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHH FVKATQLDALAIAIGTSHGAYKFSRIPSADILAIDRVKQIHQRIPNTHLVMHGSSSVPAP HHHHHHHCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH LLAIINQYGGKIKQTYGVPVAQIQEAIRHGVRKINIDTDIRLAMTGAVRQFLHENPDKFD HHHHHHHHCCCEEHHCCCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCCC AREWLKPAREAAKAVCRQRYIDFGCEGQGARIKGHSLQAVAAQYAAGTLAQVVH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure PLVSMRELLDHAASNGYGIPAFNVNNLEQVQAVVAAADEVGAPVILQASAGARKYAGAS CCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHH FIKHLILAAAEAYPHIPLVMHQDHGASPQVCQGAIDLGFGSVMMDGSLLEDGKTPATFEY HHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHCCCCHHHCCCCHHCCCCCCCEEEE NVAVTRQVVQMAHQVGVTVEGELGCLGNLETGAAGEEDGVGAEGRLERSQMLTDPEEAAS HHHHHHHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHHHH FVKATQLDALAIAIGTSHGAYKFSRIPSADILAIDRVKQIHQRIPNTHLVMHGSSSVPAP HHHHHHHCEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCHH LLAIINQYGGKIKQTYGVPVAQIQEAIRHGVRKINIDTDIRLAMTGAVRQFLHENPDKFD HHHHHHHHCCCEEHHCCCCHHHHHHHHHHCCEEECCCCCCHHHHHHHHHHHHHCCCCCCC AREWLKPAREAAKAVCRQRYIDFGCEGQGARIKGHSLQAVAAQYAAGTLAQVVH HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]