| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121611298
Identifier: 121611298
GI number: 121611298
Start: 4831471
End: 4831914
Strand: Direct
Name: 121611298
Synonym: Veis_4384
Alternate gene names: NA
Gene position: 4831471-4831914 (Clockwise)
Preceding gene: 121611297
Following gene: 121611299
Centisome position: 86.79
GC content: 60.14
Gene sequence:
>444_bases ATGAGTACTACACCAGAGAACAACGCGAACGCGGTGATACCGCTTGCGCGCGCGGACCTCGAGGCCGTGATTCAGAAGAC ACCATTTGCGCTATTGCTGGGCGCGAAGCTGGAGGAGTATGGCGATGGCGTCGCCAACCTCTCGGTGGCGTTGCGGCCTG ATCTGACCATGCACATGGGCTTCGCGCATGGCGCGGTGGTTGGGTTCCTGGCTGACAGTGCCTGTGCGTGGGCCGCAGCG TCTACGGTCGGCAACGTGGTTACCTCGGAATACAAGCTCAACCTAATTGCTCCCGGAATCGGCGAGCAGTTGCGTGCCGA AGGTCGGGTGCTGAAAGCGGCTGGTCGCAACTTGGTGTGCATGGCCAATGTGTACGCCGTGAACCAGGGCAAGTCCACCC TAGTCGCAGTAGCGTTGGCCACCATCGCACGCTTCAACAAATAA
Upstream 100 bases:
>100_bases GCAAAATCCGACGCAAGGAGACACAGCACCGCTTTGTCGCGGATGCGCTTGAGGAAGTCAGCGCCACGGCGCACAATCAG ACAGTAACAACGGAGGCATC
Downstream 100 bases:
>100_bases GGTGCTGCCCCGTGCGGCACCGCTGGTGATGGACGGAGGCATGGACCGCGACGGCACCAGAATCGGCTTTGATCTGGAGC TGACACGCGCCGTCAACGAC
Product: hypothetical protein
Products: NA
Alternate protein names: Phenylacetic Acid Degradation-Related Protein; Phenylacetic Acid Degradation Protein; Thioesterase; Phenylacetic Acid Degradation Protein PaaI; Protein Possibly Involved In Aromatic Compounds Catabolism; Phenylacetic Acid Degradation Protein PaaD
Number of amino acids: Translated: 147; Mature: 146
Protein sequence:
>147_residues MSTTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMGFAHGAVVGFLADSACAWAAA STVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVCMANVYAVNQGKSTLVAVALATIARFNK
Sequences:
>Translated_147_residues MSTTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMGFAHGAVVGFLADSACAWAAA STVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVCMANVYAVNQGKSTLVAVALATIARFNK >Mature_146_residues STTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMGFAHGAVVGFLADSACAWAAAS TVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVCMANVYAVNQGKSTLVAVALATIARFNK
Specific function: Unknown
COG id: COG2050
COG function: function code Q; Uncharacterized protein, possibly involved in aromatic compounds catabolism
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15281; Mature: 15150
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMG CCCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCHHHHHCCCEEEEEEEECCCCEEEEC FAHGAVVGFLADSACAWAAASTVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVC CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCEEEECCCCCEEE MANVYAVNQGKSTLVAVALATIARFNK EEEEEEECCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure STTPENNANAVIPLARADLEAVIQKTPFALLLGAKLEEYGDGVANLSVALRPDLTMHMG CCCCCCCCCEEEEEHHHHHHHHHHHCCCEEEECCHHHHHCCCEEEEEEEECCCCEEEEC FAHGAVVGFLADSACAWAAASTVGNVVTSEYKLNLIAPGIGEQLRAEGRVLKAAGRNLVC CHHHHHHHHHHCCHHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHCCEEEECCCCCEEE MANVYAVNQGKSTLVAVALATIARFNK EEEEEEECCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA