| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121611077
Identifier: 121611077
GI number: 121611077
Start: 4578579
End: 4578920
Strand: Direct
Name: 121611077
Synonym: Veis_4161
Alternate gene names: NA
Gene position: 4578579-4578920 (Clockwise)
Preceding gene: 121611076
Following gene: 121611078
Centisome position: 82.25
GC content: 60.53
Gene sequence:
>342_bases TTGGCAGAAGACGCGTTGAGGACCAGAAAAATGACTTTTGCACTGGCGACCGCCAACGATATCCTCCTGACCGTGGGCCA GCGTCTGCGCTTGCAGCGATTGGCTCAAGGGCTCCCCCAACGCGAATTGGTGCAGATGGCTGGCCTGTCGCTGGGAGCGC TGCGCACATTGGAAAGCAGCGGCCAGTGCTCACTGGAAACGGTGGCTCGCGTGGTCCAGTCACTGGGACTGGTGGATGAG TTGGAACACCTGTTCGTGCTCAAACGTCAATCCATCGCACAGATGGAGAGGGCCGAACTTGCCACCCAGCGACAGCGAGC GCCGCGCCAAAAGCGTCCGTAG
Upstream 100 bases:
>100_bases GTGGCGTTGGATCGATGGGCGCAACTGCTGGAGAAAGTCTCCTCCTCTTTCAAAGAGTGCGGCACCACCGCCAGGTAAGT ACCAAAGTAGTGTCACTTAC
Downstream 100 bases:
>100_bases CCTGGCGCCGCCCCAGTCATTTCGTTTATGTCATTTCGTTTATTGCGATTTTTGTTTGTTTCGAATAAAATCACCCACAC CGTTCTTCAGATGCAGGAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 113; Mature: 112
Protein sequence:
>113_residues MAEDALRTRKMTFALATANDILLTVGQRLRLQRLAQGLPQRELVQMAGLSLGALRTLESSGQCSLETVARVVQSLGLVDE LEHLFVLKRQSIAQMERAELATQRQRAPRQKRP
Sequences:
>Translated_113_residues MAEDALRTRKMTFALATANDILLTVGQRLRLQRLAQGLPQRELVQMAGLSLGALRTLESSGQCSLETVARVVQSLGLVDE LEHLFVLKRQSIAQMERAELATQRQRAPRQKRP >Mature_112_residues AEDALRTRKMTFALATANDILLTVGQRLRLQRLAQGLPQRELVQMAGLSLGALRTLESSGQCSLETVARVVQSLGLVDEL EHLFVLKRQSIAQMERAELATQRQRAPRQKRP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12650; Mature: 12519
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: PS50943 HTH_CROC1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAEDALRTRKMTFALATANDILLTVGQRLRLQRLAQGLPQRELVQMAGLSLGALRTLESS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCC GQCSLETVARVVQSLGLVDELEHLFVLKRQSIAQMERAELATQRQRAPRQKRP CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure AEDALRTRKMTFALATANDILLTVGQRLRLQRLAQGLPQRELVQMAGLSLGALRTLESS CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHCCC GQCSLETVARVVQSLGLVDELEHLFVLKRQSIAQMERAELATQRQRAPRQKRP CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA