| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610818
Identifier: 121610818
GI number: 121610818
Start: 4290771
End: 4291346
Strand: Direct
Name: 121610818
Synonym: Veis_3900
Alternate gene names: NA
Gene position: 4290771-4291346 (Clockwise)
Preceding gene: 121610808
Following gene: 121610821
Centisome position: 77.08
GC content: 65.45
Gene sequence:
>576_bases GTGGCCTGCGTCGTGGGTCGCGCGCAACTGAACACTGGCGGGCGGGGGGCCAGGCGGATAGACTCCGGCTGCATGAAATT GCACAAGATTCTTTTGCTGGCTGTGGCCTGCACCTGGGCCATGGGCGCGTCAGCGCAATGGCAGTGGATCGACAAGGAGG GGCGCAAGGTTTTCAGCGACCGCTCACCACCGCAGGACATCCCGGAAAAAGACATCCTGAAACGGCCCGGCGGCCGATCG GCCCCGGCGTCGAAGCAGGCGGTGCAAAGCGTTGCGGCGGCGCCCGCCGCAGCCGCGCCAAAACCCGCTGCCAGCGGCAA GGACAAGGAACTGGAAGAGAAAAAAGCCCAGGCCGATGCCGCAGAAGCGGCCAAGAAAAAAGCCGCAGAGGAAAAAGTCG CCAAGGACAAGGCCGAGAACTGCACCCGCGCCCGCGCAGCCAAGGCCGCATTCGATGCCGGCAAACCGATCACCCAGGCC AATGCCGATGGCGAGCGCATCTTCCTCGATGGCCCGGCCCGCGATGCCGAGGCCCGGCGCATCAACGAGATCGTGGCCTC GGACTGCGTGAAGTGA
Upstream 100 bases:
>100_bases TCGATGGCCAGCGCAGACCGACAGATGATCGGTGACGCGACACTAGCCTCCGGCCTGGCAAGGCCCGTTGCGCGGCGTCG CTGGTGGGGGGAGCGCAGCC
Downstream 100 bases:
>100_bases TGAAGTGATTCAACCCGGTTTGCCTGACCGCTGGCGGGCAAACAGCCCCGCCGTGCGGGCGCCCTGGCGGGCAAAGCGCT GGCGGCGTGCCAGTTTGGGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MACVVGRAQLNTGGRGARRIDSGCMKLHKILLLAVACTWAMGASAQWQWIDKEGRKVFSDRSPPQDIPEKDILKRPGGRS APASKQAVQSVAAAPAAAAPKPAASGKDKELEEKKAQADAAEAAKKKAAEEKVAKDKAENCTRARAAKAAFDAGKPITQA NADGERIFLDGPARDAEARRINEIVASDCVK
Sequences:
>Translated_191_residues MACVVGRAQLNTGGRGARRIDSGCMKLHKILLLAVACTWAMGASAQWQWIDKEGRKVFSDRSPPQDIPEKDILKRPGGRS APASKQAVQSVAAAPAAAAPKPAASGKDKELEEKKAQADAAEAAKKKAAEEKVAKDKAENCTRARAAKAAFDAGKPITQA NADGERIFLDGPARDAEARRINEIVASDCVK >Mature_190_residues ACVVGRAQLNTGGRGARRIDSGCMKLHKILLLAVACTWAMGASAQWQWIDKEGRKVFSDRSPPQDIPEKDILKRPGGRSA PASKQAVQSVAAAPAAAAPKPAASGKDKELEEKKAQADAAEAAKKKAAEEKVAKDKAENCTRARAAKAAFDAGKPITQAN ADGERIFLDGPARDAEARRINEIVASDCVK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20172; Mature: 20041
Theoretical pI: Translated: 10.18; Mature: 10.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACVVGRAQLNTGGRGARRIDSGCMKLHKILLLAVACTWAMGASAQWQWIDKEGRKVFSD CCEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCC RSPPQDIPEKDILKRPGGRSAPASKQAVQSVAAAPAAAAPKPAASGKDKELEEKKAQADA CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH AEAAKKKAAEEKVAKDKAENCTRARAAKAAFDAGKPITQANADGERIFLDGPARDAEARR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHH INEIVASDCVK HHHHHHHHCCC >Mature Secondary Structure ACVVGRAQLNTGGRGARRIDSGCMKLHKILLLAVACTWAMGASAQWQWIDKEGRKVFSD CEECCCHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHCC RSPPQDIPEKDILKRPGGRSAPASKQAVQSVAAAPAAAAPKPAASGKDKELEEKKAQADA CCCCCCCCHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHH AEAAKKKAAEEKVAKDKAENCTRARAAKAAFDAGKPITQANADGERIFLDGPARDAEARR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCHHHHH INEIVASDCVK HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA