Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610808

Identifier: 121610808

GI number: 121610808

Start: 4282799

End: 4283221

Strand: Direct

Name: 121610808

Synonym: Veis_3890

Alternate gene names: NA

Gene position: 4282799-4283221 (Clockwise)

Preceding gene: 121610796

Following gene: 121610818

Centisome position: 76.94

GC content: 42.32

Gene sequence:

>423_bases
TTGAATTTTGGCAAAGGCTGCTCATCCTTGCTTTCTTTTTCGATTTTTCATCAAGCGATCAATAAGCAAAATCAAATATG
TAATAAAGGAAATCCCGATGGAAAAACAAATCAATCCAACCCAAATATTCCCTTTCGGATTGGCAGATGGAAAAATCAAC
TCATAAACTCCGAAAAACATGAAAAAATCCCTCCAAGCACGAAAGACAAAAAAACGAGGCTCGAATGCCGTGCCGTTGAC
GACTTTGCGCCAAATTTACCAACCAGATATCCTGATATGGCCTCTAGCGTGGTAGTAATCAACTCAAACATATGTTCAAA
TCCGTTGTCACACGGTTTGTCGAAAACCAATAAACGTCACCAAAATCCACCCGGACCCCTCATGCGCCTGCCCCGACAGA
GGCCAAACCCGTCATTGCCATAA

Upstream 100 bases:

>100_bases
ATGCCATCAAAAACAGGTGCTTCAAGCCTGCGCCGAAAAAGTATCCTGCCAGAAGTATCAATGAAAAGCGGACTAACGCA
CTCATGAAATCACCTTTTCC

Downstream 100 bases:

>100_bases
CCATACCCACCAGAGCAAACACCAATCCCGCAGCCGCGATGGCAGGCACCAGCCCGATGGCAATGCCGGCGATGCAGTAG
CCCAGGCTGGCTTGGGGGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MNFGKGCSSLLSFSIFHQAINKQNQICNKGNPDGKTNQSNPNIPFRIGRWKNQLINSEKHEKIPPSTKDKKTRLECRAVD
DFAPNLPTRYPDMASSVVVINSNICSNPLSHGLSKTNKRHQNPPGPLMRLPRQRPNPSLP

Sequences:

>Translated_140_residues
MNFGKGCSSLLSFSIFHQAINKQNQICNKGNPDGKTNQSNPNIPFRIGRWKNQLINSEKHEKIPPSTKDKKTRLECRAVD
DFAPNLPTRYPDMASSVVVINSNICSNPLSHGLSKTNKRHQNPPGPLMRLPRQRPNPSLP
>Mature_140_residues
MNFGKGCSSLLSFSIFHQAINKQNQICNKGNPDGKTNQSNPNIPFRIGRWKNQLINSEKHEKIPPSTKDKKTRLECRAVD
DFAPNLPTRYPDMASSVVVINSNICSNPLSHGLSKTNKRHQNPPGPLMRLPRQRPNPSLP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15710; Mature: 15710

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFGKGCSSLLSFSIFHQAINKQNQICNKGNPDGKTNQSNPNIPFRIGRWKNQLINSEKH
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHHHHCCCCC
EKIPPSTKDKKTRLECRAVDDFAPNLPTRYPDMASSVVVINSNICSNPLSHGLSKTNKRH
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHCCHHHHHHHHHHHCC
QNPPGPLMRLPRQRPNPSLP
CCCCCHHHHCCCCCCCCCCC
>Mature Secondary Structure
MNFGKGCSSLLSFSIFHQAINKQNQICNKGNPDGKTNQSNPNIPFRIGRWKNQLINSEKH
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECHHHHHHHCCCCC
EKIPPSTKDKKTRLECRAVDDFAPNLPTRYPDMASSVVVINSNICSNPLSHGLSKTNKRH
CCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCEEEECCCHHCCHHHHHHHHHHHCC
QNPPGPLMRLPRQRPNPSLP
CCCCCHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA