| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610457
Identifier: 121610457
GI number: 121610457
Start: 3896873
End: 3897466
Strand: Direct
Name: 121610457
Synonym: Veis_3527
Alternate gene names: NA
Gene position: 3896873-3897466 (Clockwise)
Preceding gene: 121610456
Following gene: 121610458
Centisome position: 70.0
GC content: 73.91
Gene sequence:
>594_bases ATGAACCGACCGATGCCGCCGCCGACGCTGCGCACCGCCCTGCGCCAACACTGGAAAACACTGGCGCCGCGCGAACGAAG CCTGGTGCTGGCCGCAGCCGGCCTGGTGACGCTGGCGCTGCTGTGGTGGCTGGCCATCGCCCCGGCCTTGGCCACGCTGC GCACCGCCCCGGCACGCCATGCGACGCTCGACATGCAACTGCAACACATGCACCGCCTGCAAGCCGAGGCGCAGCAACTG CAAGCGGCCCCCCGCAGCAGCCCCGGCGACACCGTGGGCGCGCTGCGCGCGGCGCTGGCGCAGCAACTGGGCCGCAGCGC GCAAGTGAGCGTGCAGGGCGCGCACGCCAACGTCACCCTCCAAGGGGCTTGCGCCGATGCGCTGGCCCAATGGCTGGCCC AGGCCCGCAGCAATGCGCACGCCAACACGCTGCAAGCCCGGTTGACGCGCAGTGCGGCCACGGCCACAGCCACGGTCTCG ACCCCATCCGGCGGCGGCGCTGCGGCCCCCGCGCCCACACCATGCCGCCCGGGCAGCGCCATGCCCCGTTGGGACGGCAC CCTGGTGCTGGTACTGCCTGCGCCCGCCCCTTGA
Upstream 100 bases:
>100_bases TGCCCGACGAAGCATCGGCCCTGTCCGGGCGTCTGCAGGCAGCGGGCTACCAGGCCAGCGTCGAAGACGGCAACCTGTGG CTGCGCACGCAGGCCAGCCC
Downstream 100 bases:
>100_bases TGCGCCGGCCCGGCCCCAAGCCCGTTCCAATCCATCCCAACCCATTCCACCCATTCCCATCGCCCCATGGTCCACCCTGC CCGCCCTGCCCCCGGCCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MNRPMPPPTLRTALRQHWKTLAPRERSLVLAAAGLVTLALLWWLAIAPALATLRTAPARHATLDMQLQHMHRLQAEAQQL QAAPRSSPGDTVGALRAALAQQLGRSAQVSVQGAHANVTLQGACADALAQWLAQARSNAHANTLQARLTRSAATATATVS TPSGGGAAAPAPTPCRPGSAMPRWDGTLVLVLPAPAP
Sequences:
>Translated_197_residues MNRPMPPPTLRTALRQHWKTLAPRERSLVLAAAGLVTLALLWWLAIAPALATLRTAPARHATLDMQLQHMHRLQAEAQQL QAAPRSSPGDTVGALRAALAQQLGRSAQVSVQGAHANVTLQGACADALAQWLAQARSNAHANTLQARLTRSAATATATVS TPSGGGAAAPAPTPCRPGSAMPRWDGTLVLVLPAPAP >Mature_197_residues MNRPMPPPTLRTALRQHWKTLAPRERSLVLAAAGLVTLALLWWLAIAPALATLRTAPARHATLDMQLQHMHRLQAEAQQL QAAPRSSPGDTVGALRAALAQQLGRSAQVSVQGAHANVTLQGACADALAQWLAQARSNAHANTLQARLTRSAATATATVS TPSGGGAAAPAPTPCRPGSAMPRWDGTLVLVLPAPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20512; Mature: 20512
Theoretical pI: Translated: 12.39; Mature: 12.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRPMPPPTLRTALRQHWKTLAPRERSLVLAAAGLVTLALLWWLAIAPALATLRTAPARH CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ATLDMQLQHMHRLQAEAQQLQAAPRSSPGDTVGALRAALAQQLGRSAQVSVQGAHANVTL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE QGACADALAQWLAQARSNAHANTLQARLTRSAATATATVSTPSGGGAAAPAPTPCRPGSA CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC MPRWDGTLVLVLPAPAP CCCCCCEEEEEECCCCC >Mature Secondary Structure MNRPMPPPTLRTALRQHWKTLAPRERSLVLAAAGLVTLALLWWLAIAPALATLRTAPARH CCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH ATLDMQLQHMHRLQAEAQQLQAAPRSSPGDTVGALRAALAQQLGRSAQVSVQGAHANVTL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCEEEE QGACADALAQWLAQARSNAHANTLQARLTRSAATATATVSTPSGGGAAAPAPTPCRPGSA CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCCCCCCC MPRWDGTLVLVLPAPAP CCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA