| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610456
Identifier: 121610456
GI number: 121610456
Start: 3895626
End: 3896876
Strand: Direct
Name: 121610456
Synonym: Veis_3526
Alternate gene names: NA
Gene position: 3895626-3896876 (Clockwise)
Preceding gene: 121610455
Following gene: 121610457
Centisome position: 69.98
GC content: 73.38
Gene sequence:
>1251_bases ATGAGCACCCTGATCCTTTTCCTGCCGCCCGGCCGCCCAGGGCCGGCCACCGAGTACAGCTACACGCTGACGGCAGACGG CCACCATGCCACCGGCCACGCCAGCGCCCCGGCCGCCCTGCTGCCGGAACCGGCCAGGCCGGGCGCTGAAGTGGTGGCCG TGGTGCCGGCGCGGGCGCTGTCCTGGCAGCGCCTGCTGTTGCCGCCCGGCCTGCCGCTCGGCGCAGGCCAGCAAACACCA CGCTTGCGCTCGGCGCTCGAAGGTCTGCTCGAAGACCGGGTGCTCGACGATGTCGGCCAACTGCACTTTGCCATCGAGCC TGGCGCGCAGGTCGGCCAAGCGCTGTGGGTGGCGGTATGTGACCGCGACTGGCTGCGCGAGAACCTGCAAGCCCTGGAGG CCGCCGGCCGCCGCGTTGCGCGCGTGGTGCCCGAGTTTGCCCCCGGCCCCACGGCCAGCGCCGGCCCTGAGCTGTGCGCG CTGGGCACGCCCGAGGATGCCTATCTGGTCCTCAGCGGCCAGGGCGCCGACCAGGGGGTGGCCGTTTTGCCGCTGAGCCG CATGGCACTGGCACTGGCGCAAACCGGCAGCGCCGCCGACCAGACCCCGGTGCTGCGTGCCGAGCCTGCCGTGGCGGCGC TGGCCGAACGCACGCTGGGCCAGAGCGCGGGCTTGTACACCGCCAGCCAGCGCGCACTGGACGCCGCGCGCAGCCATTGG GACCTGGCCCAGTTCGACCTGGCCAGCAGCGGCAGCCGGCGGGCCATGCGCAAAGCCGGCAGCACGCTCAGCGCCTGGCT CTACGCCCCGCGATGGCGCGCGGCACGCTGGGGCGCCGGCCTGCTGGCGCTGACGCAACTGGCGGGCCTGAACGTCTGGG CCTGGCATGAACGCCAAACCCTGGCCGCCAAGCAGGCCGCAGTGCACGCCGTGCTCACCCAAACCTTTGCGCAGGTGCAG GTGGTGGCGAATGCGCCGGTGCAGATGGAAAACGAACTGGCCCGGCTGCGCCAGGCCGCAGGCAGCGTCTCGGCCAGCGA CCTGGAGCCCATGCTCGCGGCCGCAGACGCCGCCCTGCCCGCTGGCCGCCTGCCCACAGCCATCGAATACAGCCCCGGCG CGCTGCGCCTGCGTGGCCTGGCGCTCGTGCCCGACGAAGCATCGGCCCTGTCCGGGCGTCTGCAGGCAGCGGGCTACCAG GCCAGCGTCGAAGACGGCAACCTGTGGCTGCGCACGCAGGCCAGCCCATGA
Upstream 100 bases:
>100_bases TCCGGGCATGTCTGTGGCATGCCATGGCCCGCGCCCGGCGCCGCCGCCGGGGCGGGGCATCCGGGCCAGCGCCTAAAATG GCCCGCAAAATCCGTCCTCC
Downstream 100 bases:
>100_bases ACCGACCGATGCCGCCGCCGACGCTGCGCACCGCCCTGCGCCAACACTGGAAAACACTGGCGCCGCGCGAACGAAGCCTG GTGCTGGCCGCAGCCGGCCT
Product: general secretion pathway L
Products: NA
Alternate protein names: General Secretion Pathway Protein L
Number of amino acids: Translated: 416; Mature: 415
Protein sequence:
>416_residues MSTLILFLPPGRPGPATEYSYTLTADGHHATGHASAPAALLPEPARPGAEVVAVVPARALSWQRLLLPPGLPLGAGQQTP RLRSALEGLLEDRVLDDVGQLHFAIEPGAQVGQALWVAVCDRDWLRENLQALEAAGRRVARVVPEFAPGPTASAGPELCA LGTPEDAYLVLSGQGADQGVAVLPLSRMALALAQTGSAADQTPVLRAEPAVAALAERTLGQSAGLYTASQRALDAARSHW DLAQFDLASSGSRRAMRKAGSTLSAWLYAPRWRAARWGAGLLALTQLAGLNVWAWHERQTLAAKQAAVHAVLTQTFAQVQ VVANAPVQMENELARLRQAAGSVSASDLEPMLAAADAALPAGRLPTAIEYSPGALRLRGLALVPDEASALSGRLQAAGYQ ASVEDGNLWLRTQASP
Sequences:
>Translated_416_residues MSTLILFLPPGRPGPATEYSYTLTADGHHATGHASAPAALLPEPARPGAEVVAVVPARALSWQRLLLPPGLPLGAGQQTP RLRSALEGLLEDRVLDDVGQLHFAIEPGAQVGQALWVAVCDRDWLRENLQALEAAGRRVARVVPEFAPGPTASAGPELCA LGTPEDAYLVLSGQGADQGVAVLPLSRMALALAQTGSAADQTPVLRAEPAVAALAERTLGQSAGLYTASQRALDAARSHW DLAQFDLASSGSRRAMRKAGSTLSAWLYAPRWRAARWGAGLLALTQLAGLNVWAWHERQTLAAKQAAVHAVLTQTFAQVQ VVANAPVQMENELARLRQAAGSVSASDLEPMLAAADAALPAGRLPTAIEYSPGALRLRGLALVPDEASALSGRLQAAGYQ ASVEDGNLWLRTQASP >Mature_415_residues STLILFLPPGRPGPATEYSYTLTADGHHATGHASAPAALLPEPARPGAEVVAVVPARALSWQRLLLPPGLPLGAGQQTPR LRSALEGLLEDRVLDDVGQLHFAIEPGAQVGQALWVAVCDRDWLRENLQALEAAGRRVARVVPEFAPGPTASAGPELCAL GTPEDAYLVLSGQGADQGVAVLPLSRMALALAQTGSAADQTPVLRAEPAVAALAERTLGQSAGLYTASQRALDAARSHWD LAQFDLASSGSRRAMRKAGSTLSAWLYAPRWRAARWGAGLLALTQLAGLNVWAWHERQTLAAKQAAVHAVLTQTFAQVQV VANAPVQMENELARLRQAAGSVSASDLEPMLAAADAALPAGRLPTAIEYSPGALRLRGLALVPDEASALSGRLQAAGYQA SVEDGNLWLRTQASP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43533; Mature: 43402
Theoretical pI: Translated: 6.64; Mature: 6.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLILFLPPGRPGPATEYSYTLTADGHHATGHASAPAALLPEPARPGAEVVAVVPARAL CCEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEECHHHC SWQRLLLPPGLPLGAGQQTPRLRSALEGLLEDRVLDDVGQLHFAIEPGAQVGQALWVAVC CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHH DRDWLRENLQALEAAGRRVARVVPEFAPGPTASAGPELCALGTPEDAYLVLSGQGADQGV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCE AVLPLSRMALALAQTGSAADQTPVLRAEPAVAALAERTLGQSAGLYTASQRALDAARSHW EEEHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC DLAQFDLASSGSRRAMRKAGSTLSAWLYAPRWRAARWGAGLLALTQLAGLNVWAWHERQT CHHHHHHCCCCHHHHHHHCCCCCEEHEECCCCCCHHCCCHHHHHHHHHCCCEEEECCHHH LAAKQAAVHAVLTQTFAQVQVVANAPVQMENELARLRQAAGSVSASDLEPMLAAADAALP HHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC AGRLPTAIEYSPGALRLRGLALVPDEASALSGRLQAAGYQASVEDGNLWLRTQASP CCCCCCEEEECCCCEEEEEEEECCCCHHHHHCHHHHCCCEEEECCCCEEEEECCCC >Mature Secondary Structure STLILFLPPGRPGPATEYSYTLTADGHHATGHASAPAALLPEPARPGAEVVAVVPARAL CEEEEEECCCCCCCCCCEEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCEEEEECHHHC SWQRLLLPPGLPLGAGQQTPRLRSALEGLLEDRVLDDVGQLHFAIEPGAQVGQALWVAVC CCHHEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHH DRDWLRENLQALEAAGRRVARVVPEFAPGPTASAGPELCALGTPEDAYLVLSGQGADQGV CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCEEEEECCCCCCCE AVLPLSRMALALAQTGSAADQTPVLRAEPAVAALAERTLGQSAGLYTASQRALDAARSHW EEEHHHHHHHHHHHCCCCCCCCCCEECCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCC DLAQFDLASSGSRRAMRKAGSTLSAWLYAPRWRAARWGAGLLALTQLAGLNVWAWHERQT CHHHHHHCCCCHHHHHHHCCCCCEEHEECCCCCCHHCCCHHHHHHHHHCCCEEEECCHHH LAAKQAAVHAVLTQTFAQVQVVANAPVQMENELARLRQAAGSVSASDLEPMLAAADAALP HHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC AGRLPTAIEYSPGALRLRGLALVPDEASALSGRLQAAGYQASVEDGNLWLRTQASP CCCCCCEEEECCCCEEEEEEEECCCCHHHHHCHHHHCCCEEEECCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA