| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is xcpX [H]
Identifier: 121610455
GI number: 121610455
Start: 3894504
End: 3895520
Strand: Direct
Name: xcpX [H]
Synonym: Veis_3525
Alternate gene names: 121610455
Gene position: 3894504-3895520 (Clockwise)
Preceding gene: 121610454
Following gene: 121610456
Centisome position: 69.96
GC content: 71.29
Gene sequence:
>1017_bases ATGAGGCCCCCCGGCCTGCGCGCCAGCCCCGGCCTGCGCCAGCGTGCCCGGGGCGCGGCGTTGCTGCTGGCCATGCTCAC CGTCACGCTGGTGGCCACGTTTGCCGCTGCCGCGATGTGGCAGCAGTGGCGCGCGGTCGAGATCGAGTCGGCCGAGCGCG CCCGCGTGCAGTCCGCCTGGATACTGGTCGGCGCGCTCGACTGGTCGCGCCTGATCCTGTTCGAGGACAAGCGCTCGGAC GACGGCACCGACCACCTGGCCGAGCCCTGGGCCGTGCCGCTGCAGGAAGCGCGCCTGTCTACTTTTTTGGCCGCCGATCG CAATGTGACGCAGATGCAGGACGCCAGCACCGACACCACCGAAGCCTTTCTCTCGGGTGCGGTCTCTGATCTGCAGGGGC GCCTGAACATTGGCAATCTGTTCCAGGGCGGCCGGGTGCAGCCGCTGGCGCAGCGGCAGTTTGGCCGTTTGTTTGCGCGG CTGGGCCTGTCCGATCAGCAGTTGAACCTGCTGGTGGACGGCATGCGCGAGGCGCAGGCCGGCGCCGGCGGCGAGGGCGG CACGGCGCCGCTGCTGCCGCCTGGCGTCACCCAACTCGGCTGGCTGGGCCTGACACCGGCCACCGTGGCCGCGCTGGCGC CGCATGTCGCGCTGCTGCCGGTGCCCACGCCGGTCAATATCAACACCGCCGATACCGAGGTGCTGCTGGCCGCCATCGAC GACCTGGACAGCGCCAGCGCCCAGAAGATCGTGCAGGCCCGCGAGGCCAAGCATTTCCGCACGCTCGACGATGTGCGCAA GCTGCTGGCCGGCAGCGGCGTCAACCTCGGCGACGACAACGCCTACTCCGTCAACTCGTCCTGGTTCGAGGTGCACGGCC GCCTGCGGCTGAACGACACGGTGGTCGACGAGCGTTCGCTGCTGCGCAGGGATGGCCGTCTGGTCACCACCATCTGGCGC GAGCGCGGCGCGCTCGCGCGCGAGCCCTCCGGAGCGGCGCCCGAGGCCCGGCGCTGA
Upstream 100 bases:
>100_bases CCGACGGCCTGCGCCTGCAAATCACCTTGCCGGCCAGCCAGGCGCTGGCCGGCCAGCTCACGCGCGACTGGGTCAACCCG GTGCTCGGCGGGAGGCGTTC
Downstream 100 bases:
>100_bases GCATGTCCGGGCATGTCTGTGGCATGCCATGGCCCGCGCCCGGCGCCGCCGCCGGGGCGGGGCATCCGGGCCAGCGCCTA AAATGGCCCGCAAAATCCGT
Product: general secretion pathway protein K
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 338
Protein sequence:
>338_residues MRPPGLRASPGLRQRARGAALLLAMLTVTLVATFAAAAMWQQWRAVEIESAERARVQSAWILVGALDWSRLILFEDKRSD DGTDHLAEPWAVPLQEARLSTFLAADRNVTQMQDASTDTTEAFLSGAVSDLQGRLNIGNLFQGGRVQPLAQRQFGRLFAR LGLSDQQLNLLVDGMREAQAGAGGEGGTAPLLPPGVTQLGWLGLTPATVAALAPHVALLPVPTPVNINTADTEVLLAAID DLDSASAQKIVQAREAKHFRTLDDVRKLLAGSGVNLGDDNAYSVNSSWFEVHGRLRLNDTVVDERSLLRRDGRLVTTIWR ERGALAREPSGAAPEARR
Sequences:
>Translated_338_residues MRPPGLRASPGLRQRARGAALLLAMLTVTLVATFAAAAMWQQWRAVEIESAERARVQSAWILVGALDWSRLILFEDKRSD DGTDHLAEPWAVPLQEARLSTFLAADRNVTQMQDASTDTTEAFLSGAVSDLQGRLNIGNLFQGGRVQPLAQRQFGRLFAR LGLSDQQLNLLVDGMREAQAGAGGEGGTAPLLPPGVTQLGWLGLTPATVAALAPHVALLPVPTPVNINTADTEVLLAAID DLDSASAQKIVQAREAKHFRTLDDVRKLLAGSGVNLGDDNAYSVNSSWFEVHGRLRLNDTVVDERSLLRRDGRLVTTIWR ERGALAREPSGAAPEARR >Mature_338_residues MRPPGLRASPGLRQRARGAALLLAMLTVTLVATFAAAAMWQQWRAVEIESAERARVQSAWILVGALDWSRLILFEDKRSD DGTDHLAEPWAVPLQEARLSTFLAADRNVTQMQDASTDTTEAFLSGAVSDLQGRLNIGNLFQGGRVQPLAQRQFGRLFAR LGLSDQQLNLLVDGMREAQAGAGGEGGTAPLLPPGVTQLGWLGLTPATVAALAPHVALLPVPTPVNINTADTEVLLAAID DLDSASAQKIVQAREAKHFRTLDDVRKLLAGSGVNLGDDNAYSVNSSWFEVHGRLRLNDTVVDERSLLRRDGRLVTTIWR ERGALAREPSGAAPEARR
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: COG3156
COG function: function code U; Type II secretory pathway, component PulK
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP K family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005628 [H]
Pfam domain/function: PF03934 GspK [H]
EC number: NA
Molecular weight: Translated: 36512; Mature: 36512
Theoretical pI: Translated: 6.54; Mature: 6.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPPGLRASPGLRQRARGAALLLAMLTVTLVATFAAAAMWQQWRAVEIESAERARVQSAW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHEE ILVGALDWSRLILFEDKRSDDGTDHLAEPWAVPLQEARLSTFLAADRNVTQMQDASTDTT EEEEECCCEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHH EAFLSGAVSDLQGRLNIGNLFQGGRVQPLAQRQFGRLFARLGLSDQQLNLLVDGMREAQA HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GAGGEGGTAPLLPPGVTQLGWLGLTPATVAALAPHVALLPVPTPVNINTADTEVLLAAID CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH DLDSASAQKIVQAREAKHFRTLDDVRKLLAGSGVNLGDDNAYSVNSSWFEVHGRLRLNDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEECEEEECCH VVDERSLLRRDGRLVTTIWRERGALAREPSGAAPEARR HHHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure MRPPGLRASPGLRQRARGAALLLAMLTVTLVATFAAAAMWQQWRAVEIESAERARVQSAW CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCHHHHHHHHEE ILVGALDWSRLILFEDKRSDDGTDHLAEPWAVPLQEARLSTFLAADRNVTQMQDASTDTT EEEEECCCEEEEEEECCCCCCCCHHHCCCCCCCHHHHHHHHHHHCCCCHHHHHCCCCHHH EAFLSGAVSDLQGRLNIGNLFQGGRVQPLAQRQFGRLFARLGLSDQQLNLLVDGMREAQA HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHC GAGGEGGTAPLLPPGVTQLGWLGLTPATVAALAPHVALLPVPTPVNINTADTEVLLAAID CCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHH DLDSASAQKIVQAREAKHFRTLDDVRKLLAGSGVNLGDDNAYSVNSSWFEVHGRLRLNDT CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEECCCCEEEEECEEEECCH VVDERSLLRRDGRLVTTIWRERGALAREPSGAAPEARR HHHHHHHHHHCCCEEEHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1588814; 10984043 [H]