Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is yajQ [C]

Identifier: 121610396

GI number: 121610396

Start: 3837299

End: 3837784

Strand: Direct

Name: yajQ [C]

Synonym: Veis_3464

Alternate gene names: 121610396

Gene position: 3837299-3837784 (Clockwise)

Preceding gene: 121610392

Following gene: 121610397

Centisome position: 68.93

GC content: 59.67

Gene sequence:

>486_bases
ATGCCATCTTTTGACACTGTTTGCGAAGCCAACCTGGTTGACGTCAGGAACGCGGTCGAGAACACCGCCAAGGAAATCGC
CACCCGTTTCGACTTCAAAGGCACTGCGGCCAGCATAACGATCCAGGAGCGCGAGATCACGCTCATCGGCGACGCCGACT
TCCAACTCACCCAGATCGAAGACGTGCTGCGCAACAAGTTGACCAAGCGCAGCGTCGATGTGCGCTTTCTCGACATCGGC
GAGGTGCGCAAGATCGGCGGCGACAAGGTCAAACAGTTGCTCAAGGTGCGCAGCGGCATCGAAAGCGAACTGGCCAGGAA
GATCCAGAAGCTGCTCAAGGACAGCAAGCTCAAGGTCCAGGGCGCGATCCAGGAAGACAAGGTGCGCGTGACCGGCGCCA
AGCGCGACGACTTGCAGGCCGCGATGGCCCTGATCCGCAAGGAGGTGACCGATGTGCCGCTGTCGTTCGACAACTTCCGC
GATTGA

Upstream 100 bases:

>100_bases
CCAAGGCTGCAAAGAGACGTTGTTCTCGACTACCATTGGCCCGATTGTCGCATTGGGCCGTCTGCGCCATGCCCCGTGTT
TTCCGAGACCGAGAGCCACC

Downstream 100 bases:

>100_bases
GCCGGCGCAGCGTCGTCCTCCCCCCCACCATCCATCGACCATGACCGAGCCACGGACATTGCGCCAGCAGCCAACCGCCC
GGCGCGCCTTGGCGGCCCTG

Product: putative nucleotide-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MPSFDTVCEANLVDVRNAVENTAKEIATRFDFKGTAASITIQEREITLIGDADFQLTQIEDVLRNKLTKRSVDVRFLDIG
EVRKIGGDKVKQLLKVRSGIESELARKIQKLLKDSKLKVQGAIQEDKVRVTGAKRDDLQAAMALIRKEVTDVPLSFDNFR
D

Sequences:

>Translated_161_residues
MPSFDTVCEANLVDVRNAVENTAKEIATRFDFKGTAASITIQEREITLIGDADFQLTQIEDVLRNKLTKRSVDVRFLDIG
EVRKIGGDKVKQLLKVRSGIESELARKIQKLLKDSKLKVQGAIQEDKVRVTGAKRDDLQAAMALIRKEVTDVPLSFDNFR
D
>Mature_160_residues
PSFDTVCEANLVDVRNAVENTAKEIATRFDFKGTAASITIQEREITLIGDADFQLTQIEDVLRNKLTKRSVDVRFLDIGE
VRKIGGDKVKQLLKVRSGIESELARKIQKLLKDSKLKVQGAIQEDKVRVTGAKRDDLQAAMALIRKEVTDVPLSFDNFRD

Specific function: Unknown

COG id: COG1666

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0234 family

Homologues:

Organism=Escherichia coli, GI87081737, Length=163, Percent_Identity=45.398773006135, Blast_Score=138, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3464_VEREI (A1WNH8)

Other databases:

- EMBL:   CP000542
- RefSeq:   YP_998203.1
- ProteinModelPortal:   A1WNH8
- SMR:   A1WNH8
- STRING:   A1WNH8
- GeneID:   4692107
- GenomeReviews:   CP000542_GR
- KEGG:   vei:Veis_3464
- eggNOG:   COG1666
- HOGENOM:   HBG290634
- OMA:   LQFTNYR
- PhylomeDB:   A1WNH8
- ProtClustDB:   PRK05412
- BioCyc:   VEIS391735:VEIS_3464-MONOMER
- HAMAP:   MF_00632
- InterPro:   IPR007551

Pfam domain/function: PF04461 DUF520

EC number: NA

Molecular weight: Translated: 18090; Mature: 17959

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFDTVCEANLVDVRNAVENTAKEIATRFDFKGTAASITIQEREITLIGDADFQLTQIE
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCHHHHHH
DVLRNKLTKRSVDVRFLDIGEVRKIGGDKVKQLLKVRSGIESELARKIQKLLKDSKLKVQ
HHHHHHHHHHCCCEEEECHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEE
GAIQEDKVRVTGAKRDDLQAAMALIRKEVTDVPLSFDNFRD
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PSFDTVCEANLVDVRNAVENTAKEIATRFDFKGTAASITIQEREITLIGDADFQLTQIE
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCEEEEEECCCCHHHHHH
DVLRNKLTKRSVDVRFLDIGEVRKIGGDKVKQLLKVRSGIESELARKIQKLLKDSKLKVQ
HHHHHHHHHHCCCEEEECHHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEE
GAIQEDKVRVTGAKRDDLQAAMALIRKEVTDVPLSFDNFRD
CCCCCCCEEEECCCHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA