Click here to switch to the map view.

The map label for this gene is 121610366

Identifier: 121610366

GI number: 121610366

Start: 3805877

End: 3806788

Strand: Direct

Name: 121610366

Synonym: Veis_3434

Alternate gene names: NA

Gene position: 3805877-3806788 (Clockwise)

Preceding gene: 121610365

Following gene: 121610367

Centisome position: 68.37

GC content: 54.39

Gene sequence:

>912_bases
ATGATTCAAACAGGAATCTTCACCGGCTATTTTCCTTATTCACTGGAGGAATCCGCCCAGCGGATCAGGGCGCAGGGATT
CAACACCGTTCAGTTGGACCTGGCATTCAAGGACATGGATTTCCAGACCCCTGATTCCATCACCAGCGACAAATGCCGGC
ATGTGCGTGACACCTTTCGCAGGCACGATTTACCGGTGAGTTGCGTCTCGGCGTATACCAACATCGTCCACCCTGATCCT
GGTGAGCGGCGCAAACGTAACGCATATCTGAAGGCCATACTTCGCCATGCCCGCGATTGTGGCAGTCCTTACGTCATCAG
TGAGACCGGAACGGTGAACCCTGACAGTGATTGGTCCAGCCACCCGGACAACAAAAGCGAGCGCGCCTATGAGGATTGCG
TGAAAATCGTTCGGGAGATTGCGCAAGAGGCTTACGATCATGGCGCAATGTTTTTGGTCGAGACATACGTCAACAACATC
ATTGGTTCGATCGAGGAAACTTCGCGCTTGTTTGCCGACGTCGACCATCCGGGCCTGGGGCTGCTGATGGATCCGACCAA
CTATTTCGAGGCGCACAATATCGACCGGATGGACCAGGTGCTCAACCAGATGTTTGATGTCCTGTCCGACAAAATAAAAA
TTGCCCATGCCAAGGATGTCAAGCGCAGCAGCAGTGATGACAAGGGTGAGAAATTCGCCGCCATCGATGCCTCCGAGGCG
CACCAGTTTCGCGGGGTTGGCGCGATTGAACTGCCAGCCCCCGGACTGGGTTCCCTGAACTACATACTGTACCTCAAACG
CCTGGCCAGGCAGCACCCCAACATTCCCATCATCATCGAGCATCTGGACGAGAGCGATGTGCCGCGCGCAAAAGAATTTC
TGGATCGCAAGCTCATCGATGCAGGTGTTTGA

Upstream 100 bases:

>100_bases
CGGCTATCGTTCGATGGCAGAGCGGCGCACCGTCTTGCTTGCTGAATTTGAGGTATGAGTTGGATAGCGGTTTCGTGTAA
CCCGGCAGGAGGAATTTACC

Downstream 100 bases:

>100_bases
TTCCACCCGCCAAACGCCGTTCTCGCGGACTTGTAACCATCGACAGCCATATCCATATGCCATATGCCATATGGTCCATT
TCTCGTAATGCAATGAGCCG

Product: xylose isomerase domain-containing protein

Products: NA

Alternate protein names: Xylose Isomerase Domain Protein TIM Barrel; AP Endonuclease; Xylose Isomerase Domain-Containing Protein TIM Barrel; Epimerase Protein

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MIQTGIFTGYFPYSLEESAQRIRAQGFNTVQLDLAFKDMDFQTPDSITSDKCRHVRDTFRRHDLPVSCVSAYTNIVHPDP
GERRKRNAYLKAILRHARDCGSPYVISETGTVNPDSDWSSHPDNKSERAYEDCVKIVREIAQEAYDHGAMFLVETYVNNI
IGSIEETSRLFADVDHPGLGLLMDPTNYFEAHNIDRMDQVLNQMFDVLSDKIKIAHAKDVKRSSSDDKGEKFAAIDASEA
HQFRGVGAIELPAPGLGSLNYILYLKRLARQHPNIPIIIEHLDESDVPRAKEFLDRKLIDAGV

Sequences:

>Translated_303_residues
MIQTGIFTGYFPYSLEESAQRIRAQGFNTVQLDLAFKDMDFQTPDSITSDKCRHVRDTFRRHDLPVSCVSAYTNIVHPDP
GERRKRNAYLKAILRHARDCGSPYVISETGTVNPDSDWSSHPDNKSERAYEDCVKIVREIAQEAYDHGAMFLVETYVNNI
IGSIEETSRLFADVDHPGLGLLMDPTNYFEAHNIDRMDQVLNQMFDVLSDKIKIAHAKDVKRSSSDDKGEKFAAIDASEA
HQFRGVGAIELPAPGLGSLNYILYLKRLARQHPNIPIIIEHLDESDVPRAKEFLDRKLIDAGV
>Mature_303_residues
MIQTGIFTGYFPYSLEESAQRIRAQGFNTVQLDLAFKDMDFQTPDSITSDKCRHVRDTFRRHDLPVSCVSAYTNIVHPDP
GERRKRNAYLKAILRHARDCGSPYVISETGTVNPDSDWSSHPDNKSERAYEDCVKIVREIAQEAYDHGAMFLVETYVNNI
IGSIEETSRLFADVDHPGLGLLMDPTNYFEAHNIDRMDQVLNQMFDVLSDKIKIAHAKDVKRSSSDDKGEKFAAIDASEA
HQFRGVGAIELPAPGLGSLNYILYLKRLARQHPNIPIIIEHLDESDVPRAKEFLDRKLIDAGV

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34267; Mature: 34267

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTGIFTGYFPYSLEESAQRIRAQGFNTVQLDLAFKDMDFQTPDSITSDKCRHVRDTFR
CCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
RHDLPVSCVSAYTNIVHPDPGERRKRNAYLKAILRHARDCGSPYVISETGTVNPDSDWSS
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
HPDNKSERAYEDCVKIVREIAQEAYDHGAMFLVETYVNNIIGSIEETSRLFADVDHPGLG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LLMDPTNYFEAHNIDRMDQVLNQMFDVLSDKIKIAHAKDVKRSSSDDKGEKFAAIDASEA
EEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHH
HQFRGVGAIELPAPGLGSLNYILYLKRLARQHPNIPIIIEHLDESDVPRAKEFLDRKLID
HHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH
AGV
CCC
>Mature Secondary Structure
MIQTGIFTGYFPYSLEESAQRIRAQGFNTVQLDLAFKDMDFQTPDSITSDKCRHVRDTFR
CCCCCEECCCCCCCHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHH
RHDLPVSCVSAYTNIVHPDPGERRKRNAYLKAILRHARDCGSPYVISETGTVNPDSDWSS
HCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCC
HPDNKSERAYEDCVKIVREIAQEAYDHGAMFLVETYVNNIIGSIEETSRLFADVDHPGLG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
LLMDPTNYFEAHNIDRMDQVLNQMFDVLSDKIKIAHAKDVKRSSSDDKGEKFAAIDASEA
EEECCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCHHHH
HQFRGVGAIELPAPGLGSLNYILYLKRLARQHPNIPIIIEHLDESDVPRAKEFLDRKLID
HHHCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHH
AGV
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA