| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121609571
Identifier: 121609571
GI number: 121609571
Start: 2955933
End: 2958203
Strand: Direct
Name: 121609571
Synonym: Veis_2616
Alternate gene names: NA
Gene position: 2955933-2958203 (Clockwise)
Preceding gene: 121609570
Following gene: 121609580
Centisome position: 53.1
GC content: 63.67
Gene sequence:
>2271_bases ATGGAGAAGCGTTTTGTGGTGACCCTGAGCCGGTCGCAGGGTCGCAGTGCATGGGCGGTGATCTTCCGCCATCCGGTTCG GGTCGACCCGAACACTGGCAAGCCGGGCTTGCGAGTCCGCCAGGGGCTCGGAACGTCCGACGAGGCCGAGGCCAATGATC TGAAGGATCAACTCAACCAGCTACTGGCAGAGGAGAGCTTCTGGAGCTTGCCGGCCAGGGCGGAGGCTGAAAAGCGGTTC CATCGCCGGGTCGTCGAGATCTTCTATCACGGCATGGAACCTGAGCAGAGCGACTTCGGCGCGATCCGCGAGTCGATCAT TCCGCTGCCGACATCGAAGGATTCCGACTATCGGCAGGCGCTGCTCCTCGGGACGACCGGCGCCGGCAAGACGACGCTGC TTCGGCAGCTGATCGGCACGGACCCGGAGACCGAGCGCTTTCCGTCGACATCGACGGCGAAGACCACGGTGCATGAGACC GAGGTTGTGCTTGCACCAGGCCCGTACAAGGCAGTGGTCACCTTCTTCCCCATCGACGAAGTCCGCGAGCATTTGAACGA GTGCATCTCGGAGGCCGTTCTGTCCGCCTACCGTGGCGACGACGGTGAAGTGCTGCGCAAGTTGTTGATGCATGTGAACC AACGGTTCCGCTTCAACTACGTGCTTGGCAACGGACCTCAGGCAGCCGGCACCGACGACGATGAGGATGACGAGGACGAG GACGACGCTGCGGAGCAGACCGAGGAGACCGCTGCTGACGACGTGATCGATCTCGACGCCACCAATGCGCTGCTGACGAA GACGTTGACGGCGTTGCGCGCCATCGCCGCCCGCCACGGCGACCAACTCAAGACCGAGCTGGGCGCCACCGACGAAAAGG ACCAGCGGGTCGTCGACGAGTTGTTCGAGGAGGAGCTTGATCGCCGGCTTCGTGAAGACGACGAGTTCCACCGCATCAGC GACGAGCTCATGGACGAGATCGAGCTTCGTTTCTCGCTGCTTACCGATGGCGCGGTGCGCCGCAACAAGCAGGGCTGGCC GCAATCGTGGTCGTGGGAGACCGACGACCGTGCGACCTTCATCAAGACGGTCACACGCTTCTCCAGTAACCACTCCCGAC GCTTCGGGCACCTGCTGACGCCGCTGGTGAACGGCGTTCGCGTGGCAGGCGCATTCATGCCCGCGTGGAACGACGGTCAA CAACCCAAGCTCGTGCTTCTCGACGGTGAAGGCTTGGGCCACACGCCCAAGTCGGTGGCAGCCATCTCGACTTCATTGAC CCGGCGCATCGAGTCGACGGATGCCATCGTGCTCGTCGACAACGCCATGCAGCCGATGCAGGCCGCCCCGGTTGCGGCCA TGAAGGAGATGATCACGTCAGGCAGCACCAGCAAACTGCTACTCGTGTTCACGCACTTCGACGAGGTCAAGGGCGACAAC CTGCGCAACGCGGCAGATCGGGAGCAGCACGTCCTGGCTTCCGCCGAGAACGTCCTCGCGTCGATTGGCGAGGAGTTGGG TCCCTTCGCGGAACGTGCGCTTCGCGGCCGCCTGAAGGAAGCCTGCTTCTTCGTCGGCGGGATCGACGAGGACCTGGATG CTGCGAAGAAGACCCACAAGCGGACCATCGGTCAGTTGCAGACCCTGTTGGCCGCCATCGATGTCATCGTGGAAAAGCCG GCGCCCGTCCTCGCGAAGCCGGTGTACGACCGCATGAATCTCGTCCTGGCCGTGAAGAACGCTGCCGAGAGCTTCCACGA TGCGTGGTGGCCGCGCCTGGGCCTCGACTACAAGCCCGGCGTCAGCAAGGAGCACTGGAAGCGCATTTGGGCATTGAGCC GACGACTCAGCACGCCCGGCCTCGGCGACGAGTACGACAACCTCAAACCGGTCGCGGATCTCCGCAAGCAGCTTCAGGAT CGGCTGTATGTGCTGCTGCAGAACCCACTCCGGTGGGACCCCGCCGAGCCGACCGACGATGCGCACAAGCAGCAGGTTTT TGACGGCCTGGCCAACGCGCTGTCCACCAAAACGCTGGACCTCGCTACTCGCCGCGTTCGGGCCGAGCGGATGCCGGAAT GGCAGTCGGCGTTTAACCAGTCTGGGCGTGGTTCCAGCTACGCGCGCGCGTCGATCATCGGCGAGCGCATCTACGAGCGG GCTGCGCCGATTCCTGACATCACCCCCTCGCCGGATCGCAATTCCTTCCTGCACGAAGTGGCGGCTGTGGTCGAGAGCGT CTGCGAAGATTTCGGCGCCAAGCTCGCGTAG
Upstream 100 bases:
>100_bases GCGGCACCGTTGTTCCTTCGTTGTTCAGATTGTGCTTGACCGCCAGTGTCGGCATGCCTATGATCCGCTCCGGAACAACG GCTGAACAACGAGGTGCGGC
Downstream 100 bases:
>100_bases TGGACGGTCACAGACATTCGAGGAGGGGCTTGCCCTGGAGCGAGGCTAGGGCGTGTTAACAATCAAGTAATCCAGATATA AGTACAAACCAGATTGAGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 756; Mature: 756
Protein sequence:
>756_residues MEKRFVVTLSRSQGRSAWAVIFRHPVRVDPNTGKPGLRVRQGLGTSDEAEANDLKDQLNQLLAEESFWSLPARAEAEKRF HRRVVEIFYHGMEPEQSDFGAIRESIIPLPTSKDSDYRQALLLGTTGAGKTTLLRQLIGTDPETERFPSTSTAKTTVHET EVVLAPGPYKAVVTFFPIDEVREHLNECISEAVLSAYRGDDGEVLRKLLMHVNQRFRFNYVLGNGPQAAGTDDDEDDEDE DDAAEQTEETAADDVIDLDATNALLTKTLTALRAIAARHGDQLKTELGATDEKDQRVVDELFEEELDRRLREDDEFHRIS DELMDEIELRFSLLTDGAVRRNKQGWPQSWSWETDDRATFIKTVTRFSSNHSRRFGHLLTPLVNGVRVAGAFMPAWNDGQ QPKLVLLDGEGLGHTPKSVAAISTSLTRRIESTDAIVLVDNAMQPMQAAPVAAMKEMITSGSTSKLLLVFTHFDEVKGDN LRNAADREQHVLASAENVLASIGEELGPFAERALRGRLKEACFFVGGIDEDLDAAKKTHKRTIGQLQTLLAAIDVIVEKP APVLAKPVYDRMNLVLAVKNAAESFHDAWWPRLGLDYKPGVSKEHWKRIWALSRRLSTPGLGDEYDNLKPVADLRKQLQD RLYVLLQNPLRWDPAEPTDDAHKQQVFDGLANALSTKTLDLATRRVRAERMPEWQSAFNQSGRGSSYARASIIGERIYER AAPIPDITPSPDRNSFLHEVAAVVESVCEDFGAKLA
Sequences:
>Translated_756_residues MEKRFVVTLSRSQGRSAWAVIFRHPVRVDPNTGKPGLRVRQGLGTSDEAEANDLKDQLNQLLAEESFWSLPARAEAEKRF HRRVVEIFYHGMEPEQSDFGAIRESIIPLPTSKDSDYRQALLLGTTGAGKTTLLRQLIGTDPETERFPSTSTAKTTVHET EVVLAPGPYKAVVTFFPIDEVREHLNECISEAVLSAYRGDDGEVLRKLLMHVNQRFRFNYVLGNGPQAAGTDDDEDDEDE DDAAEQTEETAADDVIDLDATNALLTKTLTALRAIAARHGDQLKTELGATDEKDQRVVDELFEEELDRRLREDDEFHRIS DELMDEIELRFSLLTDGAVRRNKQGWPQSWSWETDDRATFIKTVTRFSSNHSRRFGHLLTPLVNGVRVAGAFMPAWNDGQ QPKLVLLDGEGLGHTPKSVAAISTSLTRRIESTDAIVLVDNAMQPMQAAPVAAMKEMITSGSTSKLLLVFTHFDEVKGDN LRNAADREQHVLASAENVLASIGEELGPFAERALRGRLKEACFFVGGIDEDLDAAKKTHKRTIGQLQTLLAAIDVIVEKP APVLAKPVYDRMNLVLAVKNAAESFHDAWWPRLGLDYKPGVSKEHWKRIWALSRRLSTPGLGDEYDNLKPVADLRKQLQD RLYVLLQNPLRWDPAEPTDDAHKQQVFDGLANALSTKTLDLATRRVRAERMPEWQSAFNQSGRGSSYARASIIGERIYER AAPIPDITPSPDRNSFLHEVAAVVESVCEDFGAKLA >Mature_756_residues MEKRFVVTLSRSQGRSAWAVIFRHPVRVDPNTGKPGLRVRQGLGTSDEAEANDLKDQLNQLLAEESFWSLPARAEAEKRF HRRVVEIFYHGMEPEQSDFGAIRESIIPLPTSKDSDYRQALLLGTTGAGKTTLLRQLIGTDPETERFPSTSTAKTTVHET EVVLAPGPYKAVVTFFPIDEVREHLNECISEAVLSAYRGDDGEVLRKLLMHVNQRFRFNYVLGNGPQAAGTDDDEDDEDE DDAAEQTEETAADDVIDLDATNALLTKTLTALRAIAARHGDQLKTELGATDEKDQRVVDELFEEELDRRLREDDEFHRIS DELMDEIELRFSLLTDGAVRRNKQGWPQSWSWETDDRATFIKTVTRFSSNHSRRFGHLLTPLVNGVRVAGAFMPAWNDGQ QPKLVLLDGEGLGHTPKSVAAISTSLTRRIESTDAIVLVDNAMQPMQAAPVAAMKEMITSGSTSKLLLVFTHFDEVKGDN LRNAADREQHVLASAENVLASIGEELGPFAERALRGRLKEACFFVGGIDEDLDAAKKTHKRTIGQLQTLLAAIDVIVEKP APVLAKPVYDRMNLVLAVKNAAESFHDAWWPRLGLDYKPGVSKEHWKRIWALSRRLSTPGLGDEYDNLKPVADLRKQLQD RLYVLLQNPLRWDPAEPTDDAHKQQVFDGLANALSTKTLDLATRRVRAERMPEWQSAFNQSGRGSSYARASIIGERIYER AAPIPDITPSPDRNSFLHEVAAVVESVCEDFGAKLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84425; Mature: 84425
Theoretical pI: Translated: 5.03; Mature: 5.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKRFVVTLSRSQGRSAWAVIFRHPVRVDPNTGKPGLRVRQGLGTSDEAEANDLKDQLNQ CCCEEEEEEECCCCCCCEEHEEECCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH LLAEESFWSLPARAEAEKRFHRRVVEIFYHGMEPEQSDFGAIRESIIPLPTSKDSDYRQA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHE LLLGTTGAGKTTLLRQLIGTDPETERFPSTSTAKTTVHETEVVLAPGPYKAVVTFFPIDE EEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCCCEEEEEECCHHH VREHLNECISEAVLSAYRGDDGEVLRKLLMHVNQRFRFNYVLGNGPQAAGTDDDEDDEDE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC DDAAEQTEETAADDVIDLDATNALLTKTLTALRAIAARHGDQLKTELGATDEKDQRVVDE HHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHH LFEEELDRRLREDDEFHRISDELMDEIELRFSLLTDGAVRRNKQGWPQSWSWETDDRATF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHH IKTVTRFSSNHSRRFGHLLTPLVNGVRVAGAFMPAWNDGQQPKLVLLDGEGLGHTPKSVA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHH AISTSLTRRIESTDAIVLVDNAMQPMQAAPVAAMKEMITSGSTSKLLLVFTHFDEVKGDN HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCC LRNAADREQHVLASAENVLASIGEELGPFAERALRGRLKEACFFVGGIDEDLDAAKKTHK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RTIGQLQTLLAAIDVIVEKPAPVLAKPVYDRMNLVLAVKNAAESFHDAWWPRLGLDYKPG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCCC VSKEHWKRIWALSRRLSTPGLGDEYDNLKPVADLRKQLQDRLYVLLQNPLRWDPAEPTDD CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AHKQQVFDGLANALSTKTLDLATRRVRAERMPEWQSAFNQSGRGSSYARASIIGERIYER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH AAPIPDITPSPDRNSFLHEVAAVVESVCEDFGAKLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEKRFVVTLSRSQGRSAWAVIFRHPVRVDPNTGKPGLRVRQGLGTSDEAEANDLKDQLNQ CCCEEEEEEECCCCCCCEEHEEECCEEECCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHH LLAEESFWSLPARAEAEKRFHRRVVEIFYHGMEPEQSDFGAIRESIIPLPTSKDSDYRQA HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHE LLLGTTGAGKTTLLRQLIGTDPETERFPSTSTAKTTVHETEVVLAPGPYKAVVTFFPIDE EEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCEEEECCEEEECCCCCEEEEEECCHHH VREHLNECISEAVLSAYRGDDGEVLRKLLMHVNQRFRFNYVLGNGPQAAGTDDDEDDEDE HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCC DDAAEQTEETAADDVIDLDATNALLTKTLTALRAIAARHGDQLKTELGATDEKDQRVVDE HHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHH LFEEELDRRLREDDEFHRISDELMDEIELRFSLLTDGAVRRNKQGWPQSWSWETDDRATF HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCCCCCCCCCCCCCCHHHH IKTVTRFSSNHSRRFGHLLTPLVNGVRVAGAFMPAWNDGQQPKLVLLDGEGLGHTPKSVA HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCCCHHHH AISTSLTRRIESTDAIVLVDNAMQPMQAAPVAAMKEMITSGSTSKLLLVFTHFDEVKGDN HHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEHHHHCCCC LRNAADREQHVLASAENVLASIGEELGPFAERALRGRLKEACFFVGGIDEDLDAAKKTHK CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH RTIGQLQTLLAAIDVIVEKPAPVLAKPVYDRMNLVLAVKNAAESFHDAWWPRLGLDYKPG HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEEEHHHHHHHHHHHCCCCCCCCCCC VSKEHWKRIWALSRRLSTPGLGDEYDNLKPVADLRKQLQDRLYVLLQNPLRWDPAEPTDD CCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCH AHKQQVFDGLANALSTKTLDLATRRVRAERMPEWQSAFNQSGRGSSYARASIIGERIYER HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHH AAPIPDITPSPDRNSFLHEVAAVVESVCEDFGAKLA CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA