| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609580
Identifier: 121609580
GI number: 121609580
Start: 2966111
End: 2967310
Strand: Direct
Name: 121609580
Synonym: Veis_2626
Alternate gene names: NA
Gene position: 2966111-2967310 (Clockwise)
Preceding gene: 121609571
Following gene: 121609591
Centisome position: 53.28
GC content: 67.42
Gene sequence:
>1200_bases GTGAAAGAGACCGCACCCCTGCAACTGCAACTCGAGCGCTTCCTGCCCGACGACGGCTATGCCGGCACGCTGGTGGCGCG GGTTTGGCGCCCCGACGTGCAAGGCCCCTCGGTGGTGGCCTTGCGCGCCTCGGGCGTCTACGACCTGAGCGCCGATTACC CGACGATGAGCAGCTTGCTCGACCAACCCGAGCCGGCGCGCTGCGTGCACCTGGCCCCGGGCCAGCGCTTGGGCAGCGTC CAGGAGATTCTGGCGCACAGCGACGAAGCCCTGCGCCATCTGCAAAAGCCCTTTTTCCTCGCCCCCTGCGACCTGCAAGT GGTCAAGGCTGCGGGAGTGACCTTTGCCGCCAGCCTGATCGAACGGCTGATCGAGGAGCAGGCCGACGGCGACCCGGCCA AGGCCCAGCAGGTTCGTGCGCAAATGGTCGCCAAGGTGGGCACCGACCTGTCAGCGCTCAAGCCCGGCTCGCCGCAGGCG ATGGCGTTGAAACAGCACCTGAAAGCCCAGGGCCTGTGGTCACAGTACCTGGAAGTCGGCATCGGGCCCGACGCCGAGAT ATTTGGCAAGGCGCCGGTGTTGTCGTCGGTGGGCACCGGTGCCGACATCGGCATCCGCGCCGACTCCACCTGGAACAACC CGGAGCCCGAGGTGGTGCTGGCCGTCGACGGGCGCGCCCGCATCGTCGGTGCAACGCTCGGCAACGACGTGAACCTGCGC GACCTGGAAGGCCGCAGCGCGCTGCTGCTGTCCAAGGCCAAGGACAACAACGCCTCCTGCGCGATCGGCCCGTACATCCG GCTGTTCGACGCCAGCTTTGGCCTGGCAGATGTGCGCCGCGAGCAGGTCGACCTGCGCGTCGATGGCCCGGAAGGCTTTG TGCTGCAAGGCATGAATTCGATGCAGTTCATCAGCCGCGAGCCGCAAGACCTGGTCGAGCAGGCGACCGCCGCGCACCAG TACCCCGACGGCTTCATGCTGTTTCTGGGCACGCTGTTCGCGCCCACGCAGGACCGCGATGAACCCGGCGGCGGTTTCAC CCACAAGCTGGGCGACCGGGTCGCGATCCGCAGCGCCCATTTGGGTGAGCTGTGCAACCGCGTGAATCTGAGCGAAAAAG CCGCGCCATGGACCTTCGGCCTGCGCGCCTTCATCAACAACCTGGCCGCACGCGGGCTGTTGGCGCAGCGGGCGTTGTAG
Upstream 100 bases:
>100_bases CGCGCTGCATGCCGGCAGCGGCAGGCACGCATCATACGTTGACGGCGCAGCGCGCCGTCTGCGCGACAATGCGCCCAGCC CCATCCCCGAAAGGCACATA
Downstream 100 bases:
>100_bases GGCGATGCGGCCTCGATCTGCCCGGCCACCGGAATCCCGCCCGCAGCGGCAGACTCCAAAAATCAGGAATCTTCAAACTC CGCGCTCCTGAACTTCAGCA
Product: fumarylacetoacetate hydrolase
Products: NA
Alternate protein names: Fumarylacetoacetate Hydrolase Family Protein; Fumarylacetoacetase Family Protein; Fumarylacetoacetate Hydrolase Family Protein-Like Protein; 2-Hydroxyhepta-2 4-Diene-1 7-Dioate Isomaerase; 2-Keto-3-Deoxy-D-Arabinonate Dehydratase; 2-Keto-3-Deoxyxylonate Dehydratase
Number of amino acids: Translated: 399; Mature: 399
Protein sequence:
>399_residues MKETAPLQLQLERFLPDDGYAGTLVARVWRPDVQGPSVVALRASGVYDLSADYPTMSSLLDQPEPARCVHLAPGQRLGSV QEILAHSDEALRHLQKPFFLAPCDLQVVKAAGVTFAASLIERLIEEQADGDPAKAQQVRAQMVAKVGTDLSALKPGSPQA MALKQHLKAQGLWSQYLEVGIGPDAEIFGKAPVLSSVGTGADIGIRADSTWNNPEPEVVLAVDGRARIVGATLGNDVNLR DLEGRSALLLSKAKDNNASCAIGPYIRLFDASFGLADVRREQVDLRVDGPEGFVLQGMNSMQFISREPQDLVEQATAAHQ YPDGFMLFLGTLFAPTQDRDEPGGGFTHKLGDRVAIRSAHLGELCNRVNLSEKAAPWTFGLRAFINNLAARGLLAQRAL
Sequences:
>Translated_399_residues MKETAPLQLQLERFLPDDGYAGTLVARVWRPDVQGPSVVALRASGVYDLSADYPTMSSLLDQPEPARCVHLAPGQRLGSV QEILAHSDEALRHLQKPFFLAPCDLQVVKAAGVTFAASLIERLIEEQADGDPAKAQQVRAQMVAKVGTDLSALKPGSPQA MALKQHLKAQGLWSQYLEVGIGPDAEIFGKAPVLSSVGTGADIGIRADSTWNNPEPEVVLAVDGRARIVGATLGNDVNLR DLEGRSALLLSKAKDNNASCAIGPYIRLFDASFGLADVRREQVDLRVDGPEGFVLQGMNSMQFISREPQDLVEQATAAHQ YPDGFMLFLGTLFAPTQDRDEPGGGFTHKLGDRVAIRSAHLGELCNRVNLSEKAAPWTFGLRAFINNLAARGLLAQRAL >Mature_399_residues MKETAPLQLQLERFLPDDGYAGTLVARVWRPDVQGPSVVALRASGVYDLSADYPTMSSLLDQPEPARCVHLAPGQRLGSV QEILAHSDEALRHLQKPFFLAPCDLQVVKAAGVTFAASLIERLIEEQADGDPAKAQQVRAQMVAKVGTDLSALKPGSPQA MALKQHLKAQGLWSQYLEVGIGPDAEIFGKAPVLSSVGTGADIGIRADSTWNNPEPEVVLAVDGRARIVGATLGNDVNLR DLEGRSALLLSKAKDNNASCAIGPYIRLFDASFGLADVRREQVDLRVDGPEGFVLQGMNSMQFISREPQDLVEQATAAHQ YPDGFMLFLGTLFAPTQDRDEPGGGFTHKLGDRVAIRSAHLGELCNRVNLSEKAAPWTFGLRAFINNLAARGLLAQRAL
Specific function: Unknown
COG id: COG3970
COG function: function code R; Fumarylacetoacetate (FAA) hydrolase family protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42990; Mature: 42990
Theoretical pI: Translated: 5.46; Mature: 5.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKETAPLQLQLERFLPDDGYAGTLVARVWRPDVQGPSVVALRASGVYDLSADYPTMSSLL CCCCCCCEEEHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCCHHHHHH DQPEPARCVHLAPGQRLGSVQEILAHSDEALRHLQKPFFLAPCDLQVVKAAGVTFAASLI CCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHH ERLIEEQADGDPAKAQQVRAQMVAKVGTDLSALKPGSPQAMALKQHLKAQGLWSQYLEVG HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC IGPDAEIFGKAPVLSSVGTGADIGIRADSTWNNPEPEVVLAVDGRARIVGATLGNDVNLR CCCCHHHHCCCCHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEE DLEGRSALLLSKAKDNNASCAIGPYIRLFDASFGLADVRREQVDLRVDGPEGFVLQGMNS ECCCCCEEEEEECCCCCCCEEECCEEEEEECCCCHHHHHHHHEEEEEECCCCEEEECCCH MQFISREPQDLVEQATAAHQYPDGFMLFLGTLFAPTQDRDEPGGGFTHKLGDRVAIRSAH HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHH LGELCNRVNLSEKAAPWTFGLRAFINNLAARGLLAQRAL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKETAPLQLQLERFLPDDGYAGTLVARVWRPDVQGPSVVALRASGVYDLSADYPTMSSLL CCCCCCCEEEHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEEECCEEECCCCCCHHHHHH DQPEPARCVHLAPGQRLGSVQEILAHSDEALRHLQKPFFLAPCDLQVVKAAGVTFAASLI CCCCCCCEEEECCCCHHHHHHHHHHCCHHHHHHHCCCCEECCCCHHHHHHHHHHHHHHHH ERLIEEQADGDPAKAQQVRAQMVAKVGTDLSALKPGSPQAMALKQHLKAQGLWSQYLEVG HHHHHHHCCCCHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHC IGPDAEIFGKAPVLSSVGTGADIGIRADSTWNNPEPEVVLAVDGRARIVGATLGNDVNLR CCCCHHHHCCCCHHHHCCCCCCEEEECCCCCCCCCCCEEEEECCCEEEEEEECCCCCCEE DLEGRSALLLSKAKDNNASCAIGPYIRLFDASFGLADVRREQVDLRVDGPEGFVLQGMNS ECCCCCEEEEEECCCCCCCEEECCEEEEEECCCCHHHHHHHHEEEEEECCCCEEEECCCH MQFISREPQDLVEQATAAHQYPDGFMLFLGTLFAPTQDRDEPGGGFTHKLGDRVAIRSAH HHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCHHHHCCHHHHHHHH LGELCNRVNLSEKAAPWTFGLRAFINNLAARGLLAQRAL HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA