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The map label for this gene is yajR [H]

Identifier: 120613342

GI number: 120613342

Start: 5257916

End: 5259178

Strand: Direct

Name: yajR [H]

Synonym: Aave_4711

Alternate gene names: 120613342

Gene position: 5257916-5259178 (Clockwise)

Preceding gene: 120613341

Following gene: 120613344

Centisome position: 98.23

GC content: 75.06

Gene sequence:

>1263_bases
ATGACCACTGCCGTGCCGGATCCCCTGCCGCCTACGCCCGCGACCGACATCCCCGCCGCCTCCGCCACCGCGATGACGCC
GCTGGAGCGGCGCTCCAGCCTGTCGCTGGCGCTCATCTTCGCGCTGCGCATGCTGGGGCTTTTCCTGGTGCTGCCGGTGT
TCGCGCTCGAAGCGCGCAAGTACCCCGGCGGCGACGATCCCGCCCTGGTGGGCCTCGCCATGGGCATCTACGGGCTCACC
CAGGCCGTGCTGCAGTTGCCTTTGGGCATGGCCTCCGACCGTTTCGGGCGCAAGCGCGTCATCGTGCTCGGGCTGCTGGT
GTTCGCGGCCGGCAGCCTGCTGGCCGCGCTGGCCGACTCGCTCGGCGGGCTGCTGCTGGGCCGCGCGCTGCAGGGTGCCG
GCGCCGTCTCCGCCGCCGTGACGGCCCTGCTGGCCGACCAGACGCGCGACGGGGTGCGCACCAAGGCCATGGCGCTGGTG
GGCGGCAGCATCGGGCTGATGTTCGCCGTGGCGCTCGTGGCCGCCCCGCCGCTGGCGGCCCGCTTCGGCCTGCCCGGCAT
CTTCGGGCTGACCTGCGCGCTGGCGCTGGCCGGCATCGCCGTGGTCCTCTGGGTGGTGCCGCCCGAGCCCGCACGCCATG
CCGACGCACCGCGCGGCCGCCTGGCCGACGTGCTGCGCCACCCGGACCTGCTGCGGCTGAACCTCGGCGTGTTCGCGCTG
CACACCGTGCAGCTGGCCATGTGGGTGGCCGTGCCCGCCCTGCTGGTGCAGGCCGGACTGCCCAAGAGCGCGCACTGGCA
CCTCTACCTGCCCGCCGTGGTGCTGTCCTTCCTGGCCATGGGCGGCCTGTTCGCCCTGGAACGCGCCGGCCGGCTGCGCG
GCGCCCTGCTCGGCGCCATCGGCCTCGTGCTGCTGGTGCAGCTCGGGCTGGGCTGGGCGGCGTCGGCCGGCACGCCGCCG
GGGCTGTGGGCCCTGGGCGGGCTGCTGTTCCTGTTCTTCTGCGGCTTCAACGCACTGGAAGCCAGCCAGCCCAGCCTCGT
CTCGCGCACCGCGCCGCCGGCCGTGCGCGGCGCGGCCCTGGGCACCTACAACACGCTGCAGTCGCTGGGCCTGTTCGCGG
GCGGCGCACTGGGTGGCGCGCTGCTGCGCTGGGGCGGCGCGCATGGCCTGTTCGTGGCGACTTCCCTGCTCTGTCTCGCC
TGGCTGGCCGCGGCCTGGGGCATGCAGCCCGTGCCGGCCCAGGGCAGCCGCGGGCGAAAGTAA

Upstream 100 bases:

>100_bases
GCGGGCGTGCTCGGCTGGCGACAGCGTCGCCGCTGACGGCCGGCCGGCGCGGCAGGCGCGCGATGGGCGAGAATCGCCGT
CTTTCCATCGCCTGCAACCG

Downstream 100 bases:

>100_bases
GCCCCGGCCGCCCGGGCCCGATCACCGCCCGGCGCTGTCCTGCGGAGCGCCTTGCGCAGGTGCGTGCGGGTCGGCATCCC
GCTGCGCACCGGGCCCCTCC

Product: major facilitator superfamily transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 420; Mature: 419

Protein sequence:

>420_residues
MTTAVPDPLPPTPATDIPAASATAMTPLERRSSLSLALIFALRMLGLFLVLPVFALEARKYPGGDDPALVGLAMGIYGLT
QAVLQLPLGMASDRFGRKRVIVLGLLVFAAGSLLAALADSLGGLLLGRALQGAGAVSAAVTALLADQTRDGVRTKAMALV
GGSIGLMFAVALVAAPPLAARFGLPGIFGLTCALALAGIAVVLWVVPPEPARHADAPRGRLADVLRHPDLLRLNLGVFAL
HTVQLAMWVAVPALLVQAGLPKSAHWHLYLPAVVLSFLAMGGLFALERAGRLRGALLGAIGLVLLVQLGLGWAASAGTPP
GLWALGGLLFLFFCGFNALEASQPSLVSRTAPPAVRGAALGTYNTLQSLGLFAGGALGGALLRWGGAHGLFVATSLLCLA
WLAAAWGMQPVPAQGSRGRK

Sequences:

>Translated_420_residues
MTTAVPDPLPPTPATDIPAASATAMTPLERRSSLSLALIFALRMLGLFLVLPVFALEARKYPGGDDPALVGLAMGIYGLT
QAVLQLPLGMASDRFGRKRVIVLGLLVFAAGSLLAALADSLGGLLLGRALQGAGAVSAAVTALLADQTRDGVRTKAMALV
GGSIGLMFAVALVAAPPLAARFGLPGIFGLTCALALAGIAVVLWVVPPEPARHADAPRGRLADVLRHPDLLRLNLGVFAL
HTVQLAMWVAVPALLVQAGLPKSAHWHLYLPAVVLSFLAMGGLFALERAGRLRGALLGAIGLVLLVQLGLGWAASAGTPP
GLWALGGLLFLFFCGFNALEASQPSLVSRTAPPAVRGAALGTYNTLQSLGLFAGGALGGALLRWGGAHGLFVATSLLCLA
WLAAAWGMQPVPAQGSRGRK
>Mature_419_residues
TTAVPDPLPPTPATDIPAASATAMTPLERRSSLSLALIFALRMLGLFLVLPVFALEARKYPGGDDPALVGLAMGIYGLTQ
AVLQLPLGMASDRFGRKRVIVLGLLVFAAGSLLAALADSLGGLLLGRALQGAGAVSAAVTALLADQTRDGVRTKAMALVG
GSIGLMFAVALVAAPPLAARFGLPGIFGLTCALALAGIAVVLWVVPPEPARHADAPRGRLADVLRHPDLLRLNLGVFALH
TVQLAMWVAVPALLVQAGLPKSAHWHLYLPAVVLSFLAMGGLFALERAGRLRGALLGAIGLVLLVQLGLGWAASAGTPPG
LWALGGLLFLFFCGFNALEASQPSLVSRTAPPAVRGAALGTYNTLQSLGLFAGGALGGALLRWGGAHGLFVATSLLCLAW
LAAAWGMQPVPAQGSRGRK

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

Organism=Escherichia coli, GI87081738, Length=397, Percent_Identity=42.3173803526448, Blast_Score=292, Evalue=3e-80,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42959; Mature: 42828

Theoretical pI: Translated: 11.30; Mature: 11.30

Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTAVPDPLPPTPATDIPAASATAMTPLERRSSLSLALIFALRMLGLFLVLPVFALEARK
CCCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YPGGDDPALVGLAMGIYGLTQAVLQLPLGMASDRFGRKRVIVLGLLVFAAGSLLAALADS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LGGLLLGRALQGAGAVSAAVTALLADQTRDGVRTKAMALVGGSIGLMFAVALVAAPPLAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHH
RFGLPGIFGLTCALALAGIAVVLWVVPPEPARHADAPRGRLADVLRHPDLLRLNLGVFAL
HHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHCCCCEEEECHHHHHH
HTVQLAMWVAVPALLVQAGLPKSAHWHLYLPAVVLSFLAMGGLFALERAGRLRGALLGAI
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVLLVQLGLGWAASAGTPPGLWALGGLLFLFFCGFNALEASQPSLVSRTAPPAVRGAAL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHCCCCCHHHHCHH
GTYNTLQSLGLFAGGALGGALLRWGGAHGLFVATSLLCLAWLAAAWGMQPVPAQGSRGRK
HHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TTAVPDPLPPTPATDIPAASATAMTPLERRSSLSLALIFALRMLGLFLVLPVFALEARK
CCCCCCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
YPGGDDPALVGLAMGIYGLTQAVLQLPLGMASDRFGRKRVIVLGLLVFAAGSLLAALADS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
LGGLLLGRALQGAGAVSAAVTALLADQTRDGVRTKAMALVGGSIGLMFAVALVAAPPLAA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHCCCHHH
RFGLPGIFGLTCALALAGIAVVLWVVPPEPARHADAPRGRLADVLRHPDLLRLNLGVFAL
HHCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHCCCCEEEECHHHHHH
HTVQLAMWVAVPALLVQAGLPKSAHWHLYLPAVVLSFLAMGGLFALERAGRLRGALLGAI
HHHHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLVLLVQLGLGWAASAGTPPGLWALGGLLFLFFCGFNALEASQPSLVSRTAPPAVRGAAL
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHCCCCCCHHHCCCCCHHHHCHH
GTYNTLQSLGLFAGGALGGALLRWGGAHGLFVATSLLCLAWLAAAWGMQPVPAQGSRGRK
HHHHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]