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The map label for this gene is 120613341

Identifier: 120613341

GI number: 120613341

Start: 5256988

End: 5257851

Strand: Direct

Name: 120613341

Synonym: Aave_4710

Alternate gene names: NA

Gene position: 5256988-5257851 (Clockwise)

Preceding gene: 120613340

Following gene: 120613342

Centisome position: 98.21

GC content: 71.41

Gene sequence:

>864_bases
ATGACTTCCGGTTTTTCCCACCCCTTCCCGCTTCCCGCCCGTCTTTCCTTGCGCCGCGCCTTCGCGCAGCTGGCGCTGCT
CTGCCTGCTCGCCTCCGGGGCGCAGGGCGCCTGGGCCATGCAGGTCTTCGTGAAGATGCTCTCGGGCGAAACCTTGACGC
TGGATGTGGAGCCCAGCGACTCCATCGAGAACGTGAAGGCGAAGATCCAGGACCAGAAGGACATTCCGCCCGAGCGGCAG
CGCCTCATCTTCGCGGGCAAGCAGCTGGAGGACGGCCGCACGCTGTCCGACTACAACATCCAGAAGGACTCCACGCTGCA
CCTCGTGCTGCGGCTGAGCCCGACCACGTTCTCGGCGGCGTCGGCCACCGGCACGGGCACCATCACGGCCACGCTGGCCG
GCCCGGCCGTCGCGGGCGGCTGCCAGTTCGACACCACGCAGACCGCCTTCGAGATGCCCTCCGGCGGCCCGGCCGGCGCA
CAGTTTCCCCACGGCGTGTTCCGCTTCGTCGCCACGAGCTGCACCGGCAGCGTGACGGTGACGCTGCAATACCCCCAGGC
CCTGCCCGACGGCACCCGCCTCATCAAGTTCGGCCCCTCCGGCCCCGGCGCGGACCGCTACACCTGGTTCGAGTGGACGG
ACGCGCAGATCGCGGACGACACGATCACCTTCACCATCACCGACAACGGCGCGGGCGACACCGACCCCACCGTGGGCGTG
ATCGCCGATCCGGCCGGCCCGGCACTGCTGGCCCCCGCGCCGGCACCCGCCCAGGCCACGCCGGTGCCCACGCTCTCCCC
CGCCGCGCTGGTGCTGCTGGCCTGCGCGGCGGGCGTGCTCGGCTGGCGACAGCGTCGCCGCTGA

Upstream 100 bases:

>100_bases
TGTTCCGCCATGATGCGGGGATGCGCTTTTGTATCCAAAAGTTACGCCCGTCGTTTCCGCCTTTTTGCCGCCGGCGTGCG
CGGCCAGGTCCCGTTGCCCC

Downstream 100 bases:

>100_bases
CGGCCGGCCGGCGCGGCAGGCGCGCGATGGGCGAGAATCGCCGTCTTTCCATCGCCTGCAACCGATGACCACTGCCGTGC
CGGATCCCCTGCCGCCTACG

Product: ubiquitin

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MTSGFSHPFPLPARLSLRRAFAQLALLCLLASGAQGAWAMQVFVKMLSGETLTLDVEPSDSIENVKAKIQDQKDIPPERQ
RLIFAGKQLEDGRTLSDYNIQKDSTLHLVLRLSPTTFSAASATGTGTITATLAGPAVAGGCQFDTTQTAFEMPSGGPAGA
QFPHGVFRFVATSCTGSVTVTLQYPQALPDGTRLIKFGPSGPGADRYTWFEWTDAQIADDTITFTITDNGAGDTDPTVGV
IADPAGPALLAPAPAPAQATPVPTLSPAALVLLACAAGVLGWRQRRR

Sequences:

>Translated_287_residues
MTSGFSHPFPLPARLSLRRAFAQLALLCLLASGAQGAWAMQVFVKMLSGETLTLDVEPSDSIENVKAKIQDQKDIPPERQ
RLIFAGKQLEDGRTLSDYNIQKDSTLHLVLRLSPTTFSAASATGTGTITATLAGPAVAGGCQFDTTQTAFEMPSGGPAGA
QFPHGVFRFVATSCTGSVTVTLQYPQALPDGTRLIKFGPSGPGADRYTWFEWTDAQIADDTITFTITDNGAGDTDPTVGV
IADPAGPALLAPAPAPAQATPVPTLSPAALVLLACAAGVLGWRQRRR
>Mature_286_residues
TSGFSHPFPLPARLSLRRAFAQLALLCLLASGAQGAWAMQVFVKMLSGETLTLDVEPSDSIENVKAKIQDQKDIPPERQR
LIFAGKQLEDGRTLSDYNIQKDSTLHLVLRLSPTTFSAASATGTGTITATLAGPAVAGGCQFDTTQTAFEMPSGGPAGAQ
FPHGVFRFVATSCTGSVTVTLQYPQALPDGTRLIKFGPSGPGADRYTWFEWTDAQIADDTITFTITDNGAGDTDPTVGVI
ADPAGPALLAPAPAPAQATPVPTLSPAALVLLACAAGVLGWRQRRR

Specific function: Unknown

COG id: COG5272

COG function: function code O; Ubiquitin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI4507761, Length=73, Percent_Identity=82.1917808219178, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI77539055, Length=73, Percent_Identity=82.1917808219178, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI294459921, Length=73, Percent_Identity=82.1917808219178, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI4506713, Length=73, Percent_Identity=82.1917808219178, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI208022622, Length=73, Percent_Identity=82.1917808219178, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI67191208, Length=74, Percent_Identity=81.0810810810811, Blast_Score=130, Evalue=1e-30,
Organism=Homo sapiens, GI11024714, Length=74, Percent_Identity=81.0810810810811, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI239752254, Length=76, Percent_Identity=75, Blast_Score=121, Evalue=7e-28,
Organism=Homo sapiens, GI239757745, Length=76, Percent_Identity=75, Blast_Score=121, Evalue=8e-28,
Organism=Homo sapiens, GI239746765, Length=76, Percent_Identity=75, Blast_Score=121, Evalue=8e-28,
Organism=Homo sapiens, GI5453760, Length=73, Percent_Identity=45.2054794520548, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI25151716, Length=73, Percent_Identity=80.8219178082192, Blast_Score=128, Evalue=3e-30,
Organism=Caenorhabditis elegans, GI17554758, Length=73, Percent_Identity=80.8219178082192, Blast_Score=128, Evalue=4e-30,
Organism=Caenorhabditis elegans, GI32564339, Length=73, Percent_Identity=80.8219178082192, Blast_Score=127, Evalue=5e-30,
Organism=Caenorhabditis elegans, GI17507351, Length=73, Percent_Identity=49.3150684931507, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17534233, Length=72, Percent_Identity=41.6666666666667, Blast_Score=67, Evalue=7e-12,
Organism=Saccharomyces cerevisiae, GI6322989, Length=139, Percent_Identity=48.9208633093525, Blast_Score=125, Evalue=6e-30,
Organism=Saccharomyces cerevisiae, GI6322947, Length=73, Percent_Identity=78.0821917808219, Blast_Score=125, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6322043, Length=73, Percent_Identity=78.0821917808219, Blast_Score=125, Evalue=7e-30,
Organism=Saccharomyces cerevisiae, GI6323196, Length=70, Percent_Identity=77.1428571428572, Blast_Score=120, Evalue=2e-28,
Organism=Saccharomyces cerevisiae, GI9755329, Length=73, Percent_Identity=39.7260273972603, Blast_Score=64, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17136570, Length=73, Percent_Identity=82.1917808219178, Blast_Score=130, Evalue=8e-31,
Organism=Drosophila melanogaster, GI17136574, Length=73, Percent_Identity=82.1917808219178, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI24640086, Length=74, Percent_Identity=81.0810810810811, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI24657019, Length=74, Percent_Identity=81.0810810810811, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI45552935, Length=74, Percent_Identity=81.0810810810811, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI24657014, Length=74, Percent_Identity=81.0810810810811, Blast_Score=130, Evalue=9e-31,
Organism=Drosophila melanogaster, GI24585074, Length=73, Percent_Identity=45.2054794520548, Blast_Score=84, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30111; Mature: 29980

Theoretical pI: Translated: 5.71; Mature: 5.71

Prosite motif: PS00299 UBIQUITIN_1 ; PS50053 UBIQUITIN_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGFSHPFPLPARLSLRRAFAQLALLCLLASGAQGAWAMQVFVKMLSGETLTLDVEPSD
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCC
SIENVKAKIQDQKDIPPERQRLIFAGKQLEDGRTLSDYNIQKDSTLHLVLRLSPTTFSAA
CHHHHHHHHCCCCCCCHHHHEEEEECCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCC
SATGTGTITATLAGPAVAGGCQFDTTQTAFEMPSGGPAGAQFPHGVFRFVATSCTGSVTV
CCCCCCEEEEEECCCCEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEE
TLQYPQALPDGTRLIKFGPSGPGADRYTWFEWTDAQIADDTITFTITDNGAGDTDPTVGV
EEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEECCCEEEEEEECCCCCCCCCCEEE
IADPAGPALLAPAPAPAQATPVPTLSPAALVLLACAAGVLGWRQRRR
EECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TSGFSHPFPLPARLSLRRAFAQLALLCLLASGAQGAWAMQVFVKMLSGETLTLDVEPSD
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCEEEEECCCCC
SIENVKAKIQDQKDIPPERQRLIFAGKQLEDGRTLSDYNIQKDSTLHLVLRLSPTTFSAA
CHHHHHHHHCCCCCCCHHHHEEEEECCCCCCCCEECCCCCCCCCEEEEEEEECCCCCCCC
SATGTGTITATLAGPAVAGGCQFDTTQTAFEMPSGGPAGAQFPHGVFRFVATSCTGSVTV
CCCCCCEEEEEECCCCEECCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHCCCCEEEE
TLQYPQALPDGTRLIKFGPSGPGADRYTWFEWTDAQIADDTITFTITDNGAGDTDPTVGV
EEECCCCCCCCCEEEEECCCCCCCCCEEEEEECCCEECCCEEEEEEECCCCCCCCCCEEE
IADPAGPALLAPAPAPAQATPVPTLSPAALVLLACAAGVLGWRQRRR
EECCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA