| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is cysC [H]
Identifier: 120613340
GI number: 120613340
Start: 5256226
End: 5256816
Strand: Direct
Name: cysC [H]
Synonym: Aave_4709
Alternate gene names: 120613340
Gene position: 5256226-5256816 (Clockwise)
Preceding gene: 120613336
Following gene: 120613341
Centisome position: 98.2
GC content: 74.11
Gene sequence:
>591_bases ATGATCTTCCCGCCGCCAGCCGCCTCCACCGCCATCACCCGCCAGGACCGCGAACGCCTGCAGGGCCACCCCGCCCGGGC CGTCTGGCTCACCGGGCTCTCGGGCGCGGGCAAGACCACCCTCGCGCACGCGCTGGAAACCTCGCTGCACCACGACGGCC TGCGCACTTTCGTGCTCGACGGTGACCGCCTGCGCGCCGGGCTCAGCAGCGACCTGGGCTTCACCGATGCGGACCGGGCC GAGAGCATCCGCCGGGCCGCGCATGTGGCGCGGCTGTTCGTGGACGCGGGGATGGTCGCCATCGTCGCGCTGATCTCGCC GTTCCGGGCCGAGCGCGCCGCGGCGCAGGCGCTGTTCGCGCCCGGGGATTTCGTCGAGGTGTACGTGAACGTGCCGCTGG CCGTGGCCGAGGAGCGCGATCCCAAGGGCCTGTACCGGCAGGCCCGCAGCGGCGCGCTGCCGCGCTTCACGGGGATCGAC TCGCCCTACGAGCCGCCGGAGGCCCCCGCATTGGAGCTGCGCACCGACGCGCTTTCCGTGGCGCAGTGCGTGCAGCGCCT GCGCGCGCAACTGGGCCTGCCGTCGGCATAG
Upstream 100 bases:
>100_bases CTTAAAGGGCGTCGGCATGCGGGAAACCCACCATGATAGGTGAGGCCGGCCGGCGGTGCCCGTGCCCATAATCGAAGCCC GTTCCACCGGCGCCCGCGCC
Downstream 100 bases:
>100_bases GCGCCCGTTGCCCGCTCCAGCCCGACCGTGGGCAGCGGAAATTGCGCAGAGCGCACTTCACACGGCAGCGGTGTTCCGCC ATGATGCGGGGATGCGCTTT
Product: adenylylsulfate kinase
Products: NA
Alternate protein names: APS kinase; ATP adenosine-5'-phosphosulfate 3'-phosphotransferase; Adenosine-5'-phosphosulfate kinase [H]
Number of amino acids: Translated: 196; Mature: 196
Protein sequence:
>196_residues MIFPPPAASTAITRQDRERLQGHPARAVWLTGLSGAGKTTLAHALETSLHHDGLRTFVLDGDRLRAGLSSDLGFTDADRA ESIRRAAHVARLFVDAGMVAIVALISPFRAERAAAQALFAPGDFVEVYVNVPLAVAEERDPKGLYRQARSGALPRFTGID SPYEPPEAPALELRTDALSVAQCVQRLRAQLGLPSA
Sequences:
>Translated_196_residues MIFPPPAASTAITRQDRERLQGHPARAVWLTGLSGAGKTTLAHALETSLHHDGLRTFVLDGDRLRAGLSSDLGFTDADRA ESIRRAAHVARLFVDAGMVAIVALISPFRAERAAAQALFAPGDFVEVYVNVPLAVAEERDPKGLYRQARSGALPRFTGID SPYEPPEAPALELRTDALSVAQCVQRLRAQLGLPSA >Mature_196_residues MIFPPPAASTAITRQDRERLQGHPARAVWLTGLSGAGKTTLAHALETSLHHDGLRTFVLDGDRLRAGLSSDLGFTDADRA ESIRRAAHVARLFVDAGMVAIVALISPFRAERAAAQALFAPGDFVEVYVNVPLAVAEERDPKGLYRQARSGALPRFTGID SPYEPPEAPALELRTDALSVAQCVQRLRAQLGLPSA
Specific function: Catalyzes the synthesis of activated sulfate [H]
COG id: COG0529
COG function: function code P; Adenylylsulfate kinase and related kinases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the APS kinase family [H]
Homologues:
Organism=Homo sapiens, GI46094058, Length=162, Percent_Identity=53.0864197530864, Blast_Score=171, Evalue=3e-43, Organism=Homo sapiens, GI34447231, Length=162, Percent_Identity=49.3827160493827, Blast_Score=160, Evalue=5e-40, Organism=Homo sapiens, GI62912492, Length=162, Percent_Identity=49.3827160493827, Blast_Score=160, Evalue=9e-40, Organism=Escherichia coli, GI1789107, Length=179, Percent_Identity=53.072625698324, Blast_Score=192, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17542422, Length=187, Percent_Identity=45.9893048128342, Blast_Score=170, Evalue=5e-43, Organism=Saccharomyces cerevisiae, GI6322852, Length=174, Percent_Identity=47.7011494252874, Blast_Score=180, Evalue=1e-46, Organism=Drosophila melanogaster, GI24667032, Length=182, Percent_Identity=45.0549450549451, Blast_Score=159, Evalue=1e-39, Organism=Drosophila melanogaster, GI24667028, Length=182, Percent_Identity=45.0549450549451, Blast_Score=159, Evalue=1e-39, Organism=Drosophila melanogaster, GI24667036, Length=182, Percent_Identity=45.0549450549451, Blast_Score=159, Evalue=1e-39, Organism=Drosophila melanogaster, GI24667040, Length=182, Percent_Identity=45.0549450549451, Blast_Score=159, Evalue=1e-39, Organism=Drosophila melanogaster, GI116007838, Length=182, Percent_Identity=45.0549450549451, Blast_Score=158, Evalue=2e-39, Organism=Drosophila melanogaster, GI24667044, Length=182, Percent_Identity=45.0549450549451, Blast_Score=158, Evalue=2e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002891 [H]
Pfam domain/function: PF01583 APS_kinase [H]
EC number: =2.7.1.25 [H]
Molecular weight: Translated: 21029; Mature: 21029
Theoretical pI: Translated: 7.73; Mature: 7.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIFPPPAASTAITRQDRERLQGHPARAVWLTGLSGAGKTTLAHALETSLHHDGLRTFVLD CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEC GDRLRAGLSSDLGFTDADRAESIRRAAHVARLFVDAGMVAIVALISPFRAERAAAQALFA CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGDFVEVYVNVPLAVAEERDPKGLYRQARSGALPRFTGIDSPYEPPEAPALELRTDALSV CCCEEEEEEECCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AQCVQRLRAQLGLPSA HHHHHHHHHHCCCCCC >Mature Secondary Structure MIFPPPAASTAITRQDRERLQGHPARAVWLTGLSGAGKTTLAHALETSLHHDGLRTFVLD CCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEC GDRLRAGLSSDLGFTDADRAESIRRAAHVARLFVDAGMVAIVALISPFRAERAAAQALFA CHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PGDFVEVYVNVPLAVAEERDPKGLYRQARSGALPRFTGIDSPYEPPEAPALELRTDALSV CCCEEEEEEECCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH AQCVQRLRAQLGLPSA HHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA