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The map label for this gene is pbpG [H]

Identifier: 120611767

GI number: 120611767

Start: 3430788

End: 3431903

Strand: Reverse

Name: pbpG [H]

Synonym: Aave_3107

Alternate gene names: 120611767

Gene position: 3431903-3430788 (Counterclockwise)

Preceding gene: 120611768

Following gene: 120611762

Centisome position: 64.11

GC content: 69.0

Gene sequence:

>1116_bases
ATGCAAGAACGCTGCCGCATCGTCCCCCGGCTCATCCATGCGCTGGCCTTTTGCGCATTGAGCCTCGCACTGGCCGTTCC
CGGAGCGCACGCGGCCGAGCGCAAGAAAGCGGGAGCGAAGAAGCCGGCCGCCACGGCCACCGCCAAGCAGCAGCGCACGG
CGTCGCGGTCCACCAAAGCCGTGCCCCGCAGGGCCGTGACGCGGGTCAAGGCCACGCGCTCCGTTTCCGGAAGCGCCCGG
CTGGCCCCCCGCGTGGCGGCCGTGGTGCCGGAGCGCCAGTCCTTCGGCCAGGTCGCCGGCCTGCACTCGGTGACCGACCC
CCTCGACCTGAAGTCCAGCGTGGCGCTGGTGATCGACCAGGACACGCAGGAGGTGCTGCTCAGCAAGAACGACCATGCGG
TGCTGCCCATCGCTTCGCTCACCAAGCTCATGACGGGCCTGCTGATCTCCGAAGCCAAGCTGCCCATGGATGAGCCGATC
ACCATCACCCAGGACGACGTCGATACCGAGAAGTTCAGCAGCTCCCGCCTGGCCGTGGGCACCACGCTCACGCGCGGAGA
AATGCTGCACCTGGCCCTCATGTCCAGCGAAAACCGTGCCGCCCATGCCCTGGGCCGCACGTTTCCCGGCGGCCTGGAGG
CCTTCGTGGCCCGCATGAATGCCAAGGCCCGCCTGATCGGCATGACCGAAACGCGCTATGTGGAGCCCACGGGGCTGTCC
AGCCACAACCAGTCGAGCGCGCGCGATCTCGCCACGCTGGTGAACGTCGCCCATGCCGATCCGCTGCTGCGTGAACTCAC
CACGTCGCCGGGCTACGAGGTGGCGGTGGGCCGCCGCACGCTGCACTTCAACAACACCAACCGCCTGGTGAAGAACCCCG
CGTGGGACATCGGCCTGCAGAAGACGGGCTACATCTCCGAGGCGGGCCGCTGCCTCGTGATGCAGGCCCATATCGCGGGC
CGCAAGCTCATCATGGTGTTCCTGGACTCCGCCGGCAAGTTCAGCCGCCTGGGCGACGCCGAGCGCGTCCGCCACTGGGT
GGAGAAGCTGCCGGCGCTCGGCTCCGCCAGCACGCTGCACGCCTCGGGCGCCACGGCGAGCGCGAAGCTGGACTGA

Upstream 100 bases:

>100_bases
ATTCAGCCACTTCATTGAGAAGGTCGCGCAAGATGTTGATCTTGCGCGACTTTTTTTGCTCACATACACTGTCACACAAT
TTTGCCGCTTGGAGCATCTG

Downstream 100 bases:

>100_bases
CCCCCGCGGGATTCCGCCTTGCACGGCGGGAAACTCCCGGCATCCCCAGGCCATGCGCTCACCGGCGCATGGCCTTTGTC
ATCGAGGCTCTACCGGTGCG

Product: murein-DD-endopeptidase

Products: NA

Alternate protein names: DD-endopeptidase; Penicillin-binding protein 5; PBP-5 [H]

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MQERCRIVPRLIHALAFCALSLALAVPGAHAAERKKAGAKKPAATATAKQQRTASRSTKAVPRRAVTRVKATRSVSGSAR
LAPRVAAVVPERQSFGQVAGLHSVTDPLDLKSSVALVIDQDTQEVLLSKNDHAVLPIASLTKLMTGLLISEAKLPMDEPI
TITQDDVDTEKFSSSRLAVGTTLTRGEMLHLALMSSENRAAHALGRTFPGGLEAFVARMNAKARLIGMTETRYVEPTGLS
SHNQSSARDLATLVNVAHADPLLRELTTSPGYEVAVGRRTLHFNNTNRLVKNPAWDIGLQKTGYISEAGRCLVMQAHIAG
RKLIMVFLDSAGKFSRLGDAERVRHWVEKLPALGSASTLHASGATASAKLD

Sequences:

>Translated_371_residues
MQERCRIVPRLIHALAFCALSLALAVPGAHAAERKKAGAKKPAATATAKQQRTASRSTKAVPRRAVTRVKATRSVSGSAR
LAPRVAAVVPERQSFGQVAGLHSVTDPLDLKSSVALVIDQDTQEVLLSKNDHAVLPIASLTKLMTGLLISEAKLPMDEPI
TITQDDVDTEKFSSSRLAVGTTLTRGEMLHLALMSSENRAAHALGRTFPGGLEAFVARMNAKARLIGMTETRYVEPTGLS
SHNQSSARDLATLVNVAHADPLLRELTTSPGYEVAVGRRTLHFNNTNRLVKNPAWDIGLQKTGYISEAGRCLVMQAHIAG
RKLIMVFLDSAGKFSRLGDAERVRHWVEKLPALGSASTLHASGATASAKLD
>Mature_371_residues
MQERCRIVPRLIHALAFCALSLALAVPGAHAAERKKAGAKKPAATATAKQQRTASRSTKAVPRRAVTRVKATRSVSGSAR
LAPRVAAVVPERQSFGQVAGLHSVTDPLDLKSSVALVIDQDTQEVLLSKNDHAVLPIASLTKLMTGLLISEAKLPMDEPI
TITQDDVDTEKFSSSRLAVGTTLTRGEMLHLALMSSENRAAHALGRTFPGGLEAFVARMNAKARLIGMTETRYVEPTGLS
SHNQSSARDLATLVNVAHADPLLRELTTSPGYEVAVGRRTLHFNNTNRLVKNPAWDIGLQKTGYISEAGRCLVMQAHIAG
RKLIMVFLDSAGKFSRLGDAERVRHWVEKLPALGSASTLHASGATASAKLD

Specific function: Cell wall formation [H]

COG id: COG1686

COG function: function code M; D-alanyl-D-alanine carboxypeptidase

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase S11 family [H]

Homologues:

Organism=Escherichia coli, GI87082054, Length=249, Percent_Identity=41.7670682730924, Blast_Score=203, Evalue=1e-53,
Organism=Escherichia coli, GI87082022, Length=254, Percent_Identity=26.7716535433071, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787062, Length=247, Percent_Identity=27.1255060728745, Blast_Score=65, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR018044
- InterPro:   IPR001967 [H]

Pfam domain/function: PF00768 Peptidase_S11 [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 39748; Mature: 39748

Theoretical pI: Translated: 10.83; Mature: 10.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQERCRIVPRLIHALAFCALSLALAVPGAHAAERKKAGAKKPAATATAKQQRTASRSTKA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VPRRAVTRVKATRSVSGSARLAPRVAAVVPERQSFGQVAGLHSVTDPLDLKSSVALVIDQ
HHHHHHHHHHHHHCCCCCCHHCCHHHHHCCCHHHHHHHHCHHHCCCCCCCCCCEEEEEEC
DTQEVLLSKNDHAVLPIASLTKLMTGLLISEAKLPMDEPITITQDDVDTEKFSSSRLAVG
CHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCEEEE
TTLTRGEMLHLALMSSENRAAHALGRTFPGGLEAFVARMNAKARLIGMTETRYVEPTGLS
EEECCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCEECCCCCC
SHNQSSARDLATLVNVAHADPLLRELTTSPGYEVAVGRRTLHFNNTNRLVKNPAWDIGLQ
CCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCC
KTGYISEAGRCLVMQAHIAGRKLIMVFLDSAGKFSRLGDAERVRHWVEKLPALGSASTLH
CCCCHHCCCCEEEEEECCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHCCCCCCCCEEE
ASGATASAKLD
CCCCCCCCCCC
>Mature Secondary Structure
MQERCRIVPRLIHALAFCALSLALAVPGAHAAERKKAGAKKPAATATAKQQRTASRSTKA
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
VPRRAVTRVKATRSVSGSARLAPRVAAVVPERQSFGQVAGLHSVTDPLDLKSSVALVIDQ
HHHHHHHHHHHHHCCCCCCHHCCHHHHHCCCHHHHHHHHCHHHCCCCCCCCCCEEEEEEC
DTQEVLLSKNDHAVLPIASLTKLMTGLLISEAKLPMDEPITITQDDVDTEKFSSSRLAVG
CHHHHHHCCCCCEEECHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCHHHHCCCCEEEE
TTLTRGEMLHLALMSSENRAAHALGRTFPGGLEAFVARMNAKARLIGMTETRYVEPTGLS
EEECCCCEEEEEEECCCCHHHHHHCCCCCCHHHHHHHHHCCCEEEEECCCCCEECCCCCC
SHNQSSARDLATLVNVAHADPLLRELTTSPGYEVAVGRRTLHFNNTNRLVKNPAWDIGLQ
CCCCHHHHHHHHHHHHHHCCHHHHHHHCCCCCEEEECCEEEEECCCCCCCCCCCCCCCCC
KTGYISEAGRCLVMQAHIAGRKLIMVFLDSAGKFSRLGDAERVRHWVEKLPALGSASTLH
CCCCHHCCCCEEEEEECCCCCEEEEEEECCCCCHHHCCCHHHHHHHHHHCCCCCCCCEEE
ASGATASAKLD
CCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]