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The map label for this gene is ycaC [C]

Identifier: 120611492

GI number: 120611492

Start: 3107532

End: 3108146

Strand: Reverse

Name: ycaC [C]

Synonym: Aave_2828

Alternate gene names: 120611492

Gene position: 3108146-3107532 (Counterclockwise)

Preceding gene: 120611493

Following gene: 120611491

Centisome position: 58.07

GC content: 70.41

Gene sequence:

>615_bases
ATGCTGCTCGATGCCCTCGAATCCCAACTCGTGCTGGTGGACTACCAGGAACGCCTGATGCCCGCCATCTCCGACGGCCC
GGCCGTGCTGGCCAACGCGCGGCTGCTGGCGCAGGTGGCCCGTGCGCTCGACGTGCCCGTGTGGGGCACCGAGCAGAATC
CCTCCCGGCTGGGCCCGAACGATGCCGCGCTGCGGGGGCTCTGCCGCAAGACGCTGGCCAAGATGCAATTCAGCGCGGCG
GAAGAAGGCCTCGGCGAATGGCTGCGCCCGCCAGCGCGGCCGCAGCAGGGCGGCAATGCCCGCAGCCTGCCGCGCCACCT
GCAGAAACCCGCCCAGCAGCAGGCCGCCGCCGATGCGCGCGGCAGCATCGTGATCGCCGGCTGCGAGGCGCATGTGTGCC
TGCTGCAGACGGCGCTGGACCTGCTCGAGGACGAGTTCGATGTCTGGGTGGTGACGGATGCGTGCGGGTCGCGCACCGAA
CGCAACCGCGACGCCGCCTTCGACCGGCTGGCGGGGGCCGGGGCGGAGCTGGTCACCACGGAAATGGTGGCGTTCGAATG
GCTGCGCGGTTGCGAACATCCGGCGTTCAAGGAAGTGCTGGCACTCGTGAAGTAG

Upstream 100 bases:

>100_bases
GGCTGCGTCCGGCCGGTTCCTGACGAAGCGCCTTTCCGGGCAGGCCCGCCCATATTGCGACAATGCGTCTTTCATTGTTC
ATGGCTTGCCTTTTCAACCG

Downstream 100 bases:

>100_bases
CCGTGGCGGCGCGGCTGTCAGGATGCCGCAAGCGCGGGGTGAATGATGCTGTCTGCTGAGCCTGCGTGCGAACATGCGCG
GGCCATGACGACAATCAGGA

Product: isochorismatase hydrolase

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase Superfamily Hydrolase; Nicotinamidase-Like Amidase; YcaC-Related Amidohydrolase; Amidase; Isochorismatase Domain-Containing; Amidohydrolase; Hydrolase Isochorismatase; Hydrolase; Isochorismatase Domain-Containing A; Hydrolase Isochorismatase Family; Isochorismatase Hydrolase Family Protein; Isochorismatase Family; Nicotinamidase; Isochorismatase Family Hydrolase

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MLLDALESQLVLVDYQERLMPAISDGPAVLANARLLAQVARALDVPVWGTEQNPSRLGPNDAALRGLCRKTLAKMQFSAA
EEGLGEWLRPPARPQQGGNARSLPRHLQKPAQQQAAADARGSIVIAGCEAHVCLLQTALDLLEDEFDVWVVTDACGSRTE
RNRDAAFDRLAGAGAELVTTEMVAFEWLRGCEHPAFKEVLALVK

Sequences:

>Translated_204_residues
MLLDALESQLVLVDYQERLMPAISDGPAVLANARLLAQVARALDVPVWGTEQNPSRLGPNDAALRGLCRKTLAKMQFSAA
EEGLGEWLRPPARPQQGGNARSLPRHLQKPAQQQAAADARGSIVIAGCEAHVCLLQTALDLLEDEFDVWVVTDACGSRTE
RNRDAAFDRLAGAGAELVTTEMVAFEWLRGCEHPAFKEVLALVK
>Mature_204_residues
MLLDALESQLVLVDYQERLMPAISDGPAVLANARLLAQVARALDVPVWGTEQNPSRLGPNDAALRGLCRKTLAKMQFSAA
EEGLGEWLRPPARPQQGGNARSLPRHLQKPAQQQAAADARGSIVIAGCEAHVCLLQTALDLLEDEFDVWVVTDACGSRTE
RNRDAAFDRLAGAGAELVTTEMVAFEWLRGCEHPAFKEVLALVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI209969695, Length=201, Percent_Identity=34.3283582089552, Blast_Score=94, Evalue=6e-20,
Organism=Homo sapiens, GI103471987, Length=195, Percent_Identity=32.8205128205128, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI13376007, Length=217, Percent_Identity=31.7972350230415, Blast_Score=84, Evalue=7e-17,
Organism=Caenorhabditis elegans, GI17540156, Length=204, Percent_Identity=31.8627450980392, Blast_Score=97, Evalue=6e-21,
Organism=Drosophila melanogaster, GI19922924, Length=201, Percent_Identity=32.3383084577114, Blast_Score=106, Evalue=1e-23,
Organism=Drosophila melanogaster, GI21357489, Length=200, Percent_Identity=32.5, Blast_Score=102, Evalue=2e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22134; Mature: 22134

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLDALESQLVLVDYQERLMPAISDGPAVLANARLLAQVARALDVPVWGTEQNPSRLGPN
CCCHHHHCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DAALRGLCRKTLAKMQFSAAEEGLGEWLRPPARPQQGGNARSLPRHLQKPAQQQAAADAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GSIVIAGCEAHVCLLQTALDLLEDEFDVWVVTDACGSRTERNRDAAFDRLAGAGAELVTT
CCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHH
EMVAFEWLRGCEHPAFKEVLALVK
HHHHHHHHHCCCCHHHHHHHHHHC
>Mature Secondary Structure
MLLDALESQLVLVDYQERLMPAISDGPAVLANARLLAQVARALDVPVWGTEQNPSRLGPN
CCCHHHHCCEEEEEHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC
DAALRGLCRKTLAKMQFSAAEEGLGEWLRPPARPQQGGNARSLPRHLQKPAQQQAAADAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
GSIVIAGCEAHVCLLQTALDLLEDEFDVWVVTDACGSRTERNRDAAFDRLAGAGAELVTT
CCEEEECCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHH
EMVAFEWLRGCEHPAFKEVLALVK
HHHHHHHHHCCCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA