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The map label for this gene is yliI [H]

Identifier: 120611493

GI number: 120611493

Start: 3108224

End: 3109417

Strand: Reverse

Name: yliI [H]

Synonym: Aave_2829

Alternate gene names: 120611493

Gene position: 3109417-3108224 (Counterclockwise)

Preceding gene: 120611499

Following gene: 120611492

Centisome position: 58.09

GC content: 65.08

Gene sequence:

>1194_bases
TTGACTTCACGAAAAATCAATGCAATTGTGAGAAATTCGCTGCAGTTCGGCGTTTTTCTATCGTTGATGGCGACAGAATG
CGCGTGCGTTGCAGCAGCGGAAACCGGGCCTGCGCCCGTCCGTCCCGTGGAATCCTCCGTGTCTGTCACAGTTGATGACA
TCACGGATGGGTTGTCCAGCCCGTGGGCACTGGCATTTCTTCCTGATGGTCGTTTCCTTGTGACGGAACGGACCGGCCGG
CTACGGGTGATCGATGCGAAGGGGGTGAAAAGCGCTCCGCTGTCGGGTCTTCCGCACTTGGCCGTGGGTGGGCAGGGTGG
ATTGCTCGATGTCGCGACGGACGCGCAATTCGACCGCAACCGCCGCATCTTCTTCTGCTTCTCCGAGCCGGACGGGCGGG
ACGGCGACGTGAATGGCACGGCCCTGGCCAGCGCCGTGCTGCCGCCTGGCGAACAGGCGCTGCAGGATGTGCGCGTCATT
TTCCGGCAGCAGCCCAAGGTGGCGAGCCGCCTGCATTTCGGATGTCGCATCGCCCAGGCGAAAGACGGGTCGATTTTCCT
CACGCTGGGTGAGCGCTTCGAACGCAAGGAAGATGCGCAGAAGCTGGACAACCACCTGGGCAAGGTCGTGCATGTCATGC
CCGACGGCGCGCCCGCGTCCGGCAATCCGTTCGTCGGGCGGTCCGGGGGCCTGCCCGAGATCTGGAGCTGGGGACACCGC
AATTCCCAGGGCGTGGTGATCGGGCCCGATGGCAGGCTGTGGATGCACGAGCACGGCCCCCAGGGCGGCGATGAAATCAA
CGTGCCGCAGGCCGGGCGCAACCATGGCTGGCCCGTGGTCACCTTCGGCGAGAACTATGGCGGCGGAAAGATCGGTGAAG
GGCTGACGCAGAAGGCCGGCATGGAGCCGCCGCTGCATTACTGGGTGCCGTCGATCGCCCCGTCGGGCATGGCGTTCCTG
ACGAGCGATCGCTATGGGCCTGCATGGAAAGGTAGCCTGTTCATCGGTTCGCTGAAGTTCGCGCGCCTGCATCGCCTGGA
GCTGAAAGACGGGCGGGTCGTGCGGGACGAGTTCCTGCTCGCTCGCCTGGGCCAGCGGATTCGGGACGTGCGCCAGGGGC
CCGACGGCTGGCTCTATGTGCTGACGGACGGTCCGCAGGGCCGGCTGCTGCGGCTGCGTCCGGCCGGTTCCTGA

Upstream 100 bases:

>100_bases
TTTCCATGGCCTGGGGCTATCGTCGAGCGTGTTTCTCCAGTCCGTTATCCAGTAACACCTGGGCGGTGGAGCGGCTCTTT
GTCCGACACGAGGAAGCACC

Downstream 100 bases:

>100_bases
CGAAGCGCCTTTCCGGGCAGGCCCGCCCATATTGCGACAATGCGTCTTTCATTGTTCATGGCTTGCCTTTTCAACCGATG
CTGCTCGATGCCCTCGAATC

Product: glucose sorbosone dehydrogenase

Products: NA

Alternate protein names: Asd [H]

Number of amino acids: Translated: 397; Mature: 396

Protein sequence:

>397_residues
MTSRKINAIVRNSLQFGVFLSLMATECACVAAAETGPAPVRPVESSVSVTVDDITDGLSSPWALAFLPDGRFLVTERTGR
LRVIDAKGVKSAPLSGLPHLAVGGQGGLLDVATDAQFDRNRRIFFCFSEPDGRDGDVNGTALASAVLPPGEQALQDVRVI
FRQQPKVASRLHFGCRIAQAKDGSIFLTLGERFERKEDAQKLDNHLGKVVHVMPDGAPASGNPFVGRSGGLPEIWSWGHR
NSQGVVIGPDGRLWMHEHGPQGGDEINVPQAGRNHGWPVVTFGENYGGGKIGEGLTQKAGMEPPLHYWVPSIAPSGMAFL
TSDRYGPAWKGSLFIGSLKFARLHRLELKDGRVVRDEFLLARLGQRIRDVRQGPDGWLYVLTDGPQGRLLRLRPAGS

Sequences:

>Translated_397_residues
MTSRKINAIVRNSLQFGVFLSLMATECACVAAAETGPAPVRPVESSVSVTVDDITDGLSSPWALAFLPDGRFLVTERTGR
LRVIDAKGVKSAPLSGLPHLAVGGQGGLLDVATDAQFDRNRRIFFCFSEPDGRDGDVNGTALASAVLPPGEQALQDVRVI
FRQQPKVASRLHFGCRIAQAKDGSIFLTLGERFERKEDAQKLDNHLGKVVHVMPDGAPASGNPFVGRSGGLPEIWSWGHR
NSQGVVIGPDGRLWMHEHGPQGGDEINVPQAGRNHGWPVVTFGENYGGGKIGEGLTQKAGMEPPLHYWVPSIAPSGMAFL
TSDRYGPAWKGSLFIGSLKFARLHRLELKDGRVVRDEFLLARLGQRIRDVRQGPDGWLYVLTDGPQGRLLRLRPAGS
>Mature_396_residues
TSRKINAIVRNSLQFGVFLSLMATECACVAAAETGPAPVRPVESSVSVTVDDITDGLSSPWALAFLPDGRFLVTERTGRL
RVIDAKGVKSAPLSGLPHLAVGGQGGLLDVATDAQFDRNRRIFFCFSEPDGRDGDVNGTALASAVLPPGEQALQDVRVIF
RQQPKVASRLHFGCRIAQAKDGSIFLTLGERFERKEDAQKLDNHLGKVVHVMPDGAPASGNPFVGRSGGLPEIWSWGHRN
SQGVVIGPDGRLWMHEHGPQGGDEINVPQAGRNHGWPVVTFGENYGGGKIGEGLTQKAGMEPPLHYWVPSIAPSGMAFLT
SDRYGPAWKGSLFIGSLKFARLHRLELKDGRVVRDEFLLARLGQRIRDVRQGPDGWLYVLTDGPQGRLLRLRPAGS

Specific function: Aldose sugar dehydrogenase with broad substrate specificity. The physiological substrate is unknown. Can oxidize glucose to gluconolactone. Can also utilize D-arabinose, L- arabinose and 2-deoxy-glucose. Has higher activity towards oligomeric sugars, such

COG id: COG2133

COG function: function code G; Glucose/sorbosone dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the PQQ oxidoreductase gdhB family [H]

Homologues:

Organism=Escherichia coli, GI1787060, Length=350, Percent_Identity=46.5714285714286, Blast_Score=281, Evalue=6e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR012938
- InterPro:   IPR011041 [H]

Pfam domain/function: PF07995 GSDH [H]

EC number: NA

Molecular weight: Translated: 42944; Mature: 42813

Theoretical pI: Translated: 9.23; Mature: 9.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSRKINAIVRNSLQFGVFLSLMATECACVAAAETGPAPVRPVESSVSVTVDDITDGLSS
CCCHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEHHHHCCCCC
PWALAFLPDGRFLVTERTGRLRVIDAKGVKSAPLSGLPHLAVGGQGGLLDVATDAQFDRN
CEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCC
RRIFFCFSEPDGRDGDVNGTALASAVLPPGEQALQDVRVIFRQQPKVASRLHFGCRIAQA
CEEEEEECCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCEEEEEC
KDGSIFLTLGERFERKEDAQKLDNHLGKVVHVMPDGAPASGNPFVGRSGGLPEIWSWGHR
CCCCEEEEECHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCC
NSQGVVIGPDGRLWMHEHGPQGGDEINVPQAGRNHGWPVVTFGENYGGGKIGEGLTQKAG
CCCEEEECCCCCEEEECCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCC
MEPPLHYWVPSIAPSGMAFLTSDRYGPAWKGSLFIGSLKFARLHRLELKDGRVVRDEFLL
CCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEHEEEEECCCCCCHHHHHHH
ARLGQRIRDVRQGPDGWLYVLTDGPQGRLLRLRPAGS
HHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCC
>Mature Secondary Structure 
TSRKINAIVRNSLQFGVFLSLMATECACVAAAETGPAPVRPVESSVSVTVDDITDGLSS
CCHHHHHHHHCCHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCEEEEHHHHCCCCC
PWALAFLPDGRFLVTERTGRLRVIDAKGVKSAPLSGLPHLAVGGQGGLLDVATDAQFDRN
CEEEEEECCCCEEEEECCCCEEEEECCCCCCCCCCCCCEEEECCCCCEEEEECCCCCCCC
RRIFFCFSEPDGRDGDVNGTALASAVLPPGEQALQDVRVIFRQQPKVASRLHFGCRIAQA
CEEEEEECCCCCCCCCCCCHHHHEECCCCCHHHHHHHHHHHHCCCCHHHHHHHCEEEEEC
KDGSIFLTLGERFERKEDAQKLDNHLGKVVHVMPDGAPASGNPFVGRSGGLPEIWSWGHR
CCCCEEEEECHHHHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCCCCCCCCHHHCCCCC
NSQGVVIGPDGRLWMHEHGPQGGDEINVPQAGRNHGWPVVTFGENYGGGKIGEGLTQKAG
CCCEEEECCCCCEEEECCCCCCCCEECCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHCC
MEPPLHYWVPSIAPSGMAFLTSDRYGPAWKGSLFIGSLKFARLHRLELKDGRVVRDEFLL
CCCCHHHCCCCCCCCCEEEEECCCCCCCCCCCEEEEEEEEEHEEEEECCCCCCHHHHHHH
ARLGQRIRDVRQGPDGWLYVLTDGPQGRLLRLRPAGS
HHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]