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The map label for this gene is glgB [H]

Identifier: 120610704

GI number: 120610704

Start: 2204920

End: 2206953

Strand: Reverse

Name: glgB [H]

Synonym: Aave_2024

Alternate gene names: 120610704

Gene position: 2206953-2204920 (Counterclockwise)

Preceding gene: 120610705

Following gene: 120610703

Centisome position: 41.23

GC content: 67.94

Gene sequence:

>2034_bases
ATGGCTTTCAGCCGACACGGTCGTGCGGAAGCCGGCTTTCTTGTTGCGTTCCTTCCTCCACGACCCCTTCCAGGATTCCA
CGTGCCGTCCAACGATCCCTCCCTGCTGACCGCCCACGACGCCTACCTGCTGCGCGAGGGCACGCATGCGCGCCTCTACC
AGTCGCTGGGCTGCCACCTGCGCCGCGCGGAAGGCGTGCCCGTGCAGGAGGTGCGCGGCGCGGACTTCGCGGTATGGGCC
CCGAACGCGGCCTCGGTCTCGGTGATCGGCGACTGGAACGGCTGGAACCCGGAGGCCGACCCGCTGCTCCCCCGCGGCGA
CGACAGCGGCGTGTGGGAGGGCTTCGCGCCCGATGCCACCCACGGGCAGGCTTACAAGTACCGCATCGTGTCGCGCAATG
GCGGCCGGGTGCTGGAAAAGGCGGACCCGCTGGCCATCTGCTCCGAGCTGCCGCCGCGCACCGCATCGCGCATCTGGGAC
CTCGACTACACGTGGAGCGACGGTGAATGGATGGCCTCGCGCGGCCCGCGCAATGCGCTGGGCGCCCCGATGTCGATCTA
CGAGGTGCATGCCGGCTCCTGGCGCCGCAGGGACGGCCAGTTCATGGGCTACCGCGAGCTGGCCCATGCACTGGGCGAGT
ATGTGCAGTCGATGGGCTTCACCCACGTGGAGCTGATGCCCATCACCGAGCATCCGTTCTACGGCTCCTGGGGCTACCAG
ACCACCGGCTACTTCGCGCCCACGGCGCGCTACGGCACGCCGCAGGATTTCATGTACTTCGTGGACCACCTGCACCAGCG
CGGCATCGGCGTGCTGCTGGACTGGGTGCCCTCGCACTTCCCGATGGACGGGCACGGGCTGGCGGAGTTCGACGGCACGC
ACCTGTACGAGCACGCCGACCCGCGCCAGGGCTTCCATCCGGAGTGGAACTCGGCCATCTTCAACTATGGCCGCAACGAG
GTGCGCAGCTTCCTCATCTCCTCGGGCCTGTTCTGGATCGACAAGTATCACCTGGACGGCCTGCGCGTGGACGCGGTGGC
GTCCATGCTCTACCTGGACTACGCACGCAAGCATGGCGAATGGGTGCCCAACCGCCACGGCGGGCGCGAGAATCTGGAGG
CGATCGAGTTCATGCGGCTGCTCAACCGCTCGCTCTACCGCGACCACCCGGACACGGTGAGCATCGCCGAGGAATCCACC
GCCTGGCCCATGGTGTCGCGCCCCGTGGAAATGAACGGGCTGGGCTTCGGCATGAAGTGGAACATGGGCTGGATGCACGA
CACGCTGTCGTACTTCAAGGAAGACCCGGTCCACCGCCGCTACCACCACCACAAGCTCACGTTCTCGCTGGTGTATGCCT
TCAACGAGAACTTCGTGCTGCCGCTCTCGCACGACGAAGTCGTCTATGGCAAGGGGTCGCTCGTCAACAAGATGCCGGGC
GACGAATGGCAGCAGTTCGCCAACCTGCGCGCGCTGTTCGGCCTGATGTGGGCCCACCCCGGCAAGAAACTGCTCTTCAT
GGGCGGCGAGTTCGGCCAGCGCCGCGAATGGACGCACGAGGGCGAGCTCGAATGGTGGGTCTGCGACGGCCCGCTGCACG
GCGGCCTGCAGCGCATGGTGCGCGAGCTCAACCGCGTGCTGCGCAGCGAGCCGGCCCTGCACGACATCGATTTCTCCCCC
GAAGGCTTCCAGTGGGTGGAAGCCGACGACGCCGACCGCAGCGTGATCGCCTTCCTGCGCAAACCCGGCGCCGAGGCCCA
GCGCCAGGGCGCCACGCCGGTGCTGGTGGTCTGCAACATGACGCCGGTGCCGCGAGAGAACTACCTCGTGGGGGTGCCCT
CCGCCGGCTACTGGCGGGAACTGTTCAACAGCGATGCCCGCGAGTTCGGCGGCGCCGGCTGGGGCAACCTGGGCGGAGTG
GAAGCCGCGCCCGTGCGCTCGCACCACTGGGCGCAGTCGCTGTGCCTCACGCTGCCGCCGCTGTCCACCCTCATCCTCCG
ACTGGAGCCTGCACGCCATGCCTTCCCCGCCTGA

Upstream 100 bases:

>100_bases
GCGCGAGTGAAACCGGGCAGGGCGCGGCCGCCAAAGCGGCTCCGTCCTACAGGCCCAGTCGCCGCTACCGCGCGAGCTCG
ACCGGCCGCTGCGTGCGCCA

Downstream 100 bases:

>100_bases
CTCCGCGCCCTCCTCCCGCACCGGCCGGCCCGTGCCGTCCCCCGCGCCCGCCGGCGCGGGGCGCCGCCTGCCCCCGCCCG
CCGCCACCGCCCAGGCCGTG

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 677; Mature: 676

Protein sequence:

>677_residues
MAFSRHGRAEAGFLVAFLPPRPLPGFHVPSNDPSLLTAHDAYLLREGTHARLYQSLGCHLRRAEGVPVQEVRGADFAVWA
PNAASVSVIGDWNGWNPEADPLLPRGDDSGVWEGFAPDATHGQAYKYRIVSRNGGRVLEKADPLAICSELPPRTASRIWD
LDYTWSDGEWMASRGPRNALGAPMSIYEVHAGSWRRRDGQFMGYRELAHALGEYVQSMGFTHVELMPITEHPFYGSWGYQ
TTGYFAPTARYGTPQDFMYFVDHLHQRGIGVLLDWVPSHFPMDGHGLAEFDGTHLYEHADPRQGFHPEWNSAIFNYGRNE
VRSFLISSGLFWIDKYHLDGLRVDAVASMLYLDYARKHGEWVPNRHGGRENLEAIEFMRLLNRSLYRDHPDTVSIAEEST
AWPMVSRPVEMNGLGFGMKWNMGWMHDTLSYFKEDPVHRRYHHHKLTFSLVYAFNENFVLPLSHDEVVYGKGSLVNKMPG
DEWQQFANLRALFGLMWAHPGKKLLFMGGEFGQRREWTHEGELEWWVCDGPLHGGLQRMVRELNRVLRSEPALHDIDFSP
EGFQWVEADDADRSVIAFLRKPGAEAQRQGATPVLVVCNMTPVPRENYLVGVPSAGYWRELFNSDAREFGGAGWGNLGGV
EAAPVRSHHWAQSLCLTLPPLSTLILRLEPARHAFPA

Sequences:

>Translated_677_residues
MAFSRHGRAEAGFLVAFLPPRPLPGFHVPSNDPSLLTAHDAYLLREGTHARLYQSLGCHLRRAEGVPVQEVRGADFAVWA
PNAASVSVIGDWNGWNPEADPLLPRGDDSGVWEGFAPDATHGQAYKYRIVSRNGGRVLEKADPLAICSELPPRTASRIWD
LDYTWSDGEWMASRGPRNALGAPMSIYEVHAGSWRRRDGQFMGYRELAHALGEYVQSMGFTHVELMPITEHPFYGSWGYQ
TTGYFAPTARYGTPQDFMYFVDHLHQRGIGVLLDWVPSHFPMDGHGLAEFDGTHLYEHADPRQGFHPEWNSAIFNYGRNE
VRSFLISSGLFWIDKYHLDGLRVDAVASMLYLDYARKHGEWVPNRHGGRENLEAIEFMRLLNRSLYRDHPDTVSIAEEST
AWPMVSRPVEMNGLGFGMKWNMGWMHDTLSYFKEDPVHRRYHHHKLTFSLVYAFNENFVLPLSHDEVVYGKGSLVNKMPG
DEWQQFANLRALFGLMWAHPGKKLLFMGGEFGQRREWTHEGELEWWVCDGPLHGGLQRMVRELNRVLRSEPALHDIDFSP
EGFQWVEADDADRSVIAFLRKPGAEAQRQGATPVLVVCNMTPVPRENYLVGVPSAGYWRELFNSDAREFGGAGWGNLGGV
EAAPVRSHHWAQSLCLTLPPLSTLILRLEPARHAFPA
>Mature_676_residues
AFSRHGRAEAGFLVAFLPPRPLPGFHVPSNDPSLLTAHDAYLLREGTHARLYQSLGCHLRRAEGVPVQEVRGADFAVWAP
NAASVSVIGDWNGWNPEADPLLPRGDDSGVWEGFAPDATHGQAYKYRIVSRNGGRVLEKADPLAICSELPPRTASRIWDL
DYTWSDGEWMASRGPRNALGAPMSIYEVHAGSWRRRDGQFMGYRELAHALGEYVQSMGFTHVELMPITEHPFYGSWGYQT
TGYFAPTARYGTPQDFMYFVDHLHQRGIGVLLDWVPSHFPMDGHGLAEFDGTHLYEHADPRQGFHPEWNSAIFNYGRNEV
RSFLISSGLFWIDKYHLDGLRVDAVASMLYLDYARKHGEWVPNRHGGRENLEAIEFMRLLNRSLYRDHPDTVSIAEESTA
WPMVSRPVEMNGLGFGMKWNMGWMHDTLSYFKEDPVHRRYHHHKLTFSLVYAFNENFVLPLSHDEVVYGKGSLVNKMPGD
EWQQFANLRALFGLMWAHPGKKLLFMGGEFGQRREWTHEGELEWWVCDGPLHGGLQRMVRELNRVLRSEPALHDIDFSPE
GFQWVEADDADRSVIAFLRKPGAEAQRQGATPVLVVCNMTPVPRENYLVGVPSAGYWRELFNSDAREFGGAGWGNLGGVE
AAPVRSHHWAQSLCLTLPPLSTLILRLEPARHAFPA

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=649, Percent_Identity=28.5053929121726, Blast_Score=185, Evalue=1e-46,
Organism=Escherichia coli, GI1789839, Length=639, Percent_Identity=53.0516431924883, Blast_Score=666, Evalue=0.0,
Organism=Caenorhabditis elegans, GI17554896, Length=630, Percent_Identity=26.1904761904762, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI32564391, Length=548, Percent_Identity=27.007299270073, Blast_Score=165, Evalue=7e-41,
Organism=Saccharomyces cerevisiae, GI6320826, Length=664, Percent_Identity=26.5060240963855, Blast_Score=164, Evalue=5e-41,
Organism=Drosophila melanogaster, GI28573410, Length=639, Percent_Identity=28.169014084507, Blast_Score=176, Evalue=5e-44,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783
- InterPro:   IPR014756 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 76722; Mature: 76591

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFSRHGRAEAGFLVAFLPPRPLPGFHVPSNDPSLLTAHDAYLLREGTHARLYQSLGCHL
CCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHEECCCCHHHHHHHHCCCE
RRAEGVPVQEVRGADFAVWAPNAASVSVIGDWNGWNPEADPLLPRGDDSGVWEGFAPDAT
ECCCCCCHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HGQAYKYRIVSRNGGRVLEKADPLAICSELPPRTASRIWDLDYTWSDGEWMASRGPRNAL
CCCEEEEEEEECCCCEEECCCCCHHHHHCCCCCHHHHEECCEEEECCCCCCCCCCCCCCC
GAPMSIYEVHAGSWRRRDGQFMGYRELAHALGEYVQSMGFTHVELMPITEHPFYGSWGYQ
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
TTGYFAPTARYGTPQDFMYFVDHLHQRGIGVLLDWVPSHFPMDGHGLAEFDGTHLYEHAD
CCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCC
PRQGFHPEWNSAIFNYGRNEVRSFLISSGLFWIDKYHLDGLRVDAVASMLYLDYARKHGE
CCCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHHHHHHCCC
WVPNRHGGRENLEAIEFMRLLNRSLYRDHPDTVSIAEESTAWPMVSRPVEMNGLGFGMKW
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEE
NMGWMHDTLSYFKEDPVHRRYHHHKLTFSLVYAFNENFVLPLSHDEVVYGKGSLVNKMPG
CCCHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEECCCEEEECCCCCEEECCCCCCCCCCC
DEWQQFANLRALFGLMWAHPGKKLLFMGGEFGQRREWTHEGELEWWVCDGPLHGGLQRMV
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
RELNRVLRSEPALHDIDFSPEGFQWVEADDADRSVIAFLRKPGAEAQRQGATPVLVVCNM
HHHHHHHHCCCCCEECCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHCCCCEEEEEECC
TPVPRENYLVGVPSAGYWRELFNSDAREFGGAGWGNLGGVEAAPVRSHHWAQSLCLTLPP
CCCCCCCEEEECCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
LSTLILRLEPARHAFPA
HHHHHEEECCHHCCCCC
>Mature Secondary Structure 
AFSRHGRAEAGFLVAFLPPRPLPGFHVPSNDPSLLTAHDAYLLREGTHARLYQSLGCHL
CCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEECCHHEECCCCHHHHHHHHCCCE
RRAEGVPVQEVRGADFAVWAPNAASVSVIGDWNGWNPEADPLLPRGDDSGVWEGFAPDAT
ECCCCCCHHHHCCCEEEEECCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
HGQAYKYRIVSRNGGRVLEKADPLAICSELPPRTASRIWDLDYTWSDGEWMASRGPRNAL
CCCEEEEEEEECCCCEEECCCCCHHHHHCCCCCHHHHEECCEEEECCCCCCCCCCCCCCC
GAPMSIYEVHAGSWRRRDGQFMGYRELAHALGEYVQSMGFTHVELMPITEHPFYGSWGYQ
CCCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCC
TTGYFAPTARYGTPQDFMYFVDHLHQRGIGVLLDWVPSHFPMDGHGLAEFDGTHLYEHAD
CCCEECCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCCEEECCCC
PRQGFHPEWNSAIFNYGRNEVRSFLISSGLFWIDKYHLDGLRVDAVASMLYLDYARKHGE
CCCCCCCCHHHHHHHCCHHHHHHHHHHCCCEEEEEEECCCEEHHHHHHHHHHHHHHHCCC
WVPNRHGGRENLEAIEFMRLLNRSLYRDHPDTVSIAEESTAWPMVSRPVEMNGLGFGMKW
CCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCCCCCCCEEECCCCCCEEE
NMGWMHDTLSYFKEDPVHRRYHHHKLTFSLVYAFNENFVLPLSHDEVVYGKGSLVNKMPG
CCCHHHHHHHHHHCCCHHHHHHHHEEEEEEEEEECCCEEEECCCCCEEECCCCCCCCCCC
DEWQQFANLRALFGLMWAHPGKKLLFMGGEFGQRREWTHEGELEWWVCDGPLHGGLQRMV
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHH
RELNRVLRSEPALHDIDFSPEGFQWVEADDADRSVIAFLRKPGAEAQRQGATPVLVVCNM
HHHHHHHHCCCCCEECCCCCCCCEEEECCCCCHHHHHHHHCCCCHHHHCCCCEEEEEECC
TPVPRENYLVGVPSAGYWRELFNSDAREFGGAGWGNLGGVEAAPVRSHHWAQSLCLTLPP
CCCCCCCEEEECCCCHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCC
LSTLILRLEPARHAFPA
HHHHHEEECCHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA