Click here to switch to the map view.

The map label for this gene is aam1 [H]

Identifier: 120610703

GI number: 120610703

Start: 2202765

End: 2204888

Strand: Reverse

Name: aam1 [H]

Synonym: Aave_2023

Alternate gene names: 120610703

Gene position: 2204888-2202765 (Counterclockwise)

Preceding gene: 120610704

Following gene: 120610702

Centisome position: 41.19

GC content: 72.55

Gene sequence:

>2124_bases
GTGCCGTCCCCCGCGCCCGCCGGCGCGGGGCGCCGCCTGCCCCCGCCCGCCGCCACCGCCCAGGCCGTGCCGCGCGCCGC
GCCGCCGCTTCCGGCAGACGGGCGCGCGCGCGCGGTGATCGACGCGGTGCTGCCGGTGGTGGACGGCGGCCGCTTCCCGG
TCAAGCGCGTGGCGGGCGAGGCGGTGCGCATCACCGCCCACTGCTTCACCGACGGGCACGACGTGCCGCGGGCGATGCTG
CAGTGGTGGAAGGAAGAAGGCCCCGGCGCCCCCACCGCGCCGGCCGAGGTGCCGATGCACCCCGAGGTGAACGATGAATG
GTGGGCCGAGTTCACGCCGCCCGACCCGGGGCTCTACCGCTACACGGTGGTCGCCTGGGTGGACGCCTTCGAATCCTGGC
GGCACGACATGCAGCGCCGCGTGGATCCGGCGGACATCCGCGTGGCGGCGCGCGTGGGCGCGGCCGACGCCCGGGCCGCA
GCGATGCGGGCCGCGGCGCATCCCGCGCCGGCCGACGCGCGGCAGCTCGAGGAATGGGCGGAGGCGCTGGAACGCGGCGC
CCGCGAGGACAGCACCGATGCGGCGCCGCTCAAGGCGCTGGCGCTGCAGGAAGCCGCGGCCGAGGCGATGCGCCGCCACC
CCGACCGCAGCCTGGAAACCCGCCACCCCGTCGCGCTGCCGCTGCGGGCGGACCGGGAGCGCGCGCGCTTCAGCACCTGG
TACGAACTCTTCCCGCGCTCCACCGCGGCCGTGCCGGGCATGCACGGCACCTTCCGCGACGTGGAGGGCCGGCTGGCCGA
CATCGCCGCCATGGGCTTCGACGTGCTCTATTTCCCGCCCGTCCACCCCATCGGCCGGGTGCAGCGCAAGGGCCGCAACA
ACGCCCTCGCGGCCGCGCCCGGCGACGTGGGCAGCCCCTGGGCGATCGGCGCCGACGAAGGCGGGCACAAGTCCATCCAC
CCGGAACTGGGCACCCCCGAAGACTTCCGGCGCCTTGTCGCGCGGGCCCGGGAACACGGCATCGAGATCGCGCTGGACAT
CGCCTTCCAGTGCGCGCCGGACCATCCCTACGTTCGCGAGCATCCTGACTGGTTCCGCTGGCGCCCCGACGGCACCGTGC
AGTACGCGGAGAACCCGCCCAAGAAGTACCAGGACATCTATCCCTTCCACTTCGAGTGCGAGGACTGGCGGGGCCTCTGG
CAGGAACTGCGCAGCGTGTTCGCGCACTGGATCGGCGAGGGGGTGCGCATCTTTCGCGTGGACAACCCGCACACCAAGGC
ATTCGGCTTCTGGGAATGGGTGATCGGCGACATCCAGCGCGAGCACCCCGACGTGATCTTCCTGGCGGAGGCCTTCACGC
GCCCCAAGGTGATGCACGGCCTGGCGAAGCGGGGTTATACCCAGTCCTATACCTACTTCACCTGGCGCAACACGCGGCAG
GAACTGCAGGACTATTTCACCGAGCTCAACACCGCGCCCGGGCGGGACTACTTCCGCCCCAACGCGTGGCCCAACACGCC
CGACATCCTGCATGCGCAACTGCAGGGCGGCGAGCCCGCCATGTTCGCGCTGCGGCTGGTGCTGGCCGCCACGCTCTCGG
CCAACTACGGCATCTACGGTCCGGCCTACGAACTGCTGGAGCACGTGCCCCGCGAGCCCGGCAGCGAGGAGTACCGCGAC
TCCGAAAAGTACCAGCTGCGGCACTGGGACCTGGAGCGGCCCGGCAACCTGCGGCCGCTCATCGCCCGCGTGAACCACAT
CCGTCGCGCCCACCCTGCCCTGCAGGCCGACCACAGCCTGCGCTTCCTGCCGGTGGACAACGAGATGCTGCTGGCCTACC
TGAAGCGATCGCCGGACGGCCGCGACGTGATCGTGACGGTGGTCAACCTCGATCCGCACCACGCGCAGTCGGGCTGGATG
CGCCTGACCCCGGCCGACATCGCCATCGCGGCGGGCGACCCGCCCGCGGCCGACTGGCAGATGCACGACCTGCTGAGCCA
GCAGCGCTTCCTCTGGCAGGGCGACACCCACTACGTGCTGCTGGACCCGCAGCGCGCGCCCGCCCACATCTTCGCCGTGC
GGCGCCGCGTCGCGGGCGCCGGAGACATCGACCCCTTCCAGTGA

Upstream 100 bases:

>100_bases
CTCACGCTGCCGCCGCTGTCCACCCTCATCCTCCGACTGGAGCCTGCACGCCATGCCTTCCCCGCCTGACTCCGCGCCCT
CCTCCCGCACCGGCCGGCCC

Downstream 100 bases:

>100_bases
TGCCATGAACGCTCCCCTGCTGCGCCAACCCCTCCCGGCCGCGGACGCCGCCGCCGGGCCGCTGCCCGAGCCGGGCCCCG
TGGTGATGCCCGAAACCCCG

Product: alpha amylase, catalytic region

Products: D-Glucose 6-phosphate; D-Glucose [C]

Alternate protein names: NA

Number of amino acids: Translated: 707; Mature: 706

Protein sequence:

>707_residues
MPSPAPAGAGRRLPPPAATAQAVPRAAPPLPADGRARAVIDAVLPVVDGGRFPVKRVAGEAVRITAHCFTDGHDVPRAML
QWWKEEGPGAPTAPAEVPMHPEVNDEWWAEFTPPDPGLYRYTVVAWVDAFESWRHDMQRRVDPADIRVAARVGAADARAA
AMRAAAHPAPADARQLEEWAEALERGAREDSTDAAPLKALALQEAAAEAMRRHPDRSLETRHPVALPLRADRERARFSTW
YELFPRSTAAVPGMHGTFRDVEGRLADIAAMGFDVLYFPPVHPIGRVQRKGRNNALAAAPGDVGSPWAIGADEGGHKSIH
PELGTPEDFRRLVARAREHGIEIALDIAFQCAPDHPYVREHPDWFRWRPDGTVQYAENPPKKYQDIYPFHFECEDWRGLW
QELRSVFAHWIGEGVRIFRVDNPHTKAFGFWEWVIGDIQREHPDVIFLAEAFTRPKVMHGLAKRGYTQSYTYFTWRNTRQ
ELQDYFTELNTAPGRDYFRPNAWPNTPDILHAQLQGGEPAMFALRLVLAATLSANYGIYGPAYELLEHVPREPGSEEYRD
SEKYQLRHWDLERPGNLRPLIARVNHIRRAHPALQADHSLRFLPVDNEMLLAYLKRSPDGRDVIVTVVNLDPHHAQSGWM
RLTPADIAIAAGDPPAADWQMHDLLSQQRFLWQGDTHYVLLDPQRAPAHIFAVRRRVAGAGDIDPFQ

Sequences:

>Translated_707_residues
MPSPAPAGAGRRLPPPAATAQAVPRAAPPLPADGRARAVIDAVLPVVDGGRFPVKRVAGEAVRITAHCFTDGHDVPRAML
QWWKEEGPGAPTAPAEVPMHPEVNDEWWAEFTPPDPGLYRYTVVAWVDAFESWRHDMQRRVDPADIRVAARVGAADARAA
AMRAAAHPAPADARQLEEWAEALERGAREDSTDAAPLKALALQEAAAEAMRRHPDRSLETRHPVALPLRADRERARFSTW
YELFPRSTAAVPGMHGTFRDVEGRLADIAAMGFDVLYFPPVHPIGRVQRKGRNNALAAAPGDVGSPWAIGADEGGHKSIH
PELGTPEDFRRLVARAREHGIEIALDIAFQCAPDHPYVREHPDWFRWRPDGTVQYAENPPKKYQDIYPFHFECEDWRGLW
QELRSVFAHWIGEGVRIFRVDNPHTKAFGFWEWVIGDIQREHPDVIFLAEAFTRPKVMHGLAKRGYTQSYTYFTWRNTRQ
ELQDYFTELNTAPGRDYFRPNAWPNTPDILHAQLQGGEPAMFALRLVLAATLSANYGIYGPAYELLEHVPREPGSEEYRD
SEKYQLRHWDLERPGNLRPLIARVNHIRRAHPALQADHSLRFLPVDNEMLLAYLKRSPDGRDVIVTVVNLDPHHAQSGWM
RLTPADIAIAAGDPPAADWQMHDLLSQQRFLWQGDTHYVLLDPQRAPAHIFAVRRRVAGAGDIDPFQ
>Mature_706_residues
PSPAPAGAGRRLPPPAATAQAVPRAAPPLPADGRARAVIDAVLPVVDGGRFPVKRVAGEAVRITAHCFTDGHDVPRAMLQ
WWKEEGPGAPTAPAEVPMHPEVNDEWWAEFTPPDPGLYRYTVVAWVDAFESWRHDMQRRVDPADIRVAARVGAADARAAA
MRAAAHPAPADARQLEEWAEALERGAREDSTDAAPLKALALQEAAAEAMRRHPDRSLETRHPVALPLRADRERARFSTWY
ELFPRSTAAVPGMHGTFRDVEGRLADIAAMGFDVLYFPPVHPIGRVQRKGRNNALAAAPGDVGSPWAIGADEGGHKSIHP
ELGTPEDFRRLVARAREHGIEIALDIAFQCAPDHPYVREHPDWFRWRPDGTVQYAENPPKKYQDIYPFHFECEDWRGLWQ
ELRSVFAHWIGEGVRIFRVDNPHTKAFGFWEWVIGDIQREHPDVIFLAEAFTRPKVMHGLAKRGYTQSYTYFTWRNTRQE
LQDYFTELNTAPGRDYFRPNAWPNTPDILHAQLQGGEPAMFALRLVLAATLSANYGIYGPAYELLEHVPREPGSEEYRDS
EKYQLRHWDLERPGNLRPLIARVNHIRRAHPALQADHSLRFLPVDNEMLLAYLKRSPDGRDVIVTVVNLDPHHAQSGWMR
LTPADIAIAAGDPPAADWQMHDLLSQQRFLWQGDTHYVLLDPQRAPAHIFAVRRRVAGAGDIDPFQ

Specific function: Unknown

COG id: COG0366

COG function: function code G; Glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family. GlgE subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021828
- InterPro:   IPR006047
- InterPro:   IPR017853
- InterPro:   IPR013781 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF11896 DUF3416 [H]

EC number: 3.2.1.93 [C]

Molecular weight: Translated: 79646; Mature: 79515

Theoretical pI: Translated: 6.68; Mature: 6.68

Prosite motif: PS00019 ACTININ_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSPAPAGAGRRLPPPAATAQAVPRAAPPLPADGRARAVIDAVLPVVDGGRFPVKRVAGE
CCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCC
AVRITAHCFTDGHDVPRAMLQWWKEEGPGAPTAPAEVPMHPEVNDEWWAEFTPPDPGLYR
EEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCH
YTVVAWVDAFESWRHDMQRRVDPADIRVAARVGAADARAAAMRAAAHPAPADARQLEEWA
HHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
EALERGAREDSTDAAPLKALALQEAAAEAMRRHPDRSLETRHPVALPLRADRERARFSTW
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHH
YELFPRSTAAVPGMHGTFRDVEGRLADIAAMGFDVLYFPPVHPIGRVQRKGRNNALAAAP
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCEEECC
GDVGSPWAIGADEGGHKSIHPELGTPEDFRRLVARAREHGIEIALDIAFQCAPDHPYVRE
CCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCC
HPDWFRWRPDGTVQYAENPPKKYQDIYPFHFECEDWRGLWQELRSVFAHWIGEGVRIFRV
CCCCEEECCCCCEEECCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEE
DNPHTKAFGFWEWVIGDIQREHPDVIFLAEAFTRPKVMHGLAKRGYTQSYTYFTWRNTRQ
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHHHHHCCCCCCEEEEEECCHHH
ELQDYFTELNTAPGRDYFRPNAWPNTPDILHAQLQGGEPAMFALRLVLAATLSANYGIYG
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
PAYELLEHVPREPGSEEYRDSEKYQLRHWDLERPGNLRPLIARVNHIRRAHPALQADHSL
HHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCE
RFLPVDNEMLLAYLKRSPDGRDVIVTVVNLDPHHAQSGWMRLTPADIAIAAGDPPAADWQ
EEEECCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCH
MHDLLSQQRFLWQGDTHYVLLDPQRAPAHIFAVRRRVAGAGDIDPFQ
HHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
PSPAPAGAGRRLPPPAATAQAVPRAAPPLPADGRARAVIDAVLPVVDGGRFPVKRVAGE
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHHCCC
AVRITAHCFTDGHDVPRAMLQWWKEEGPGAPTAPAEVPMHPEVNDEWWAEFTPPDPGLYR
EEEEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCH
YTVVAWVDAFESWRHDMQRRVDPADIRVAARVGAADARAAAMRAAAHPAPADARQLEEWA
HHHHHHHHHHHHHHHHHHHCCCHHHEEEEECCCCCHHHHHHHHHHCCCCCCCHHHHHHHH
EALERGAREDSTDAAPLKALALQEAAAEAMRRHPDRSLETRHPVALPLRADRERARFSTW
HHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCHHHHHHHHH
YELFPRSTAAVPGMHGTFRDVEGRLADIAAMGFDVLYFPPVHPIGRVQRKGRNNALAAAP
HHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCCHHHHHHHCCCCCCEEECC
GDVGSPWAIGADEGGHKSIHPELGTPEDFRRLVARAREHGIEIALDIAFQCAPDHPYVRE
CCCCCCCEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCC
HPDWFRWRPDGTVQYAENPPKKYQDIYPFHFECEDWRGLWQELRSVFAHWIGEGVRIFRV
CCCCEEECCCCCEEECCCCCHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEE
DNPHTKAFGFWEWVIGDIQREHPDVIFLAEAFTRPKVMHGLAKRGYTQSYTYFTWRNTRQ
CCCCCCHHHHHHHHHHHHHHCCCCEEEEECHHCCHHHHHHHHHCCCCCCEEEEEECCHHH
ELQDYFTELNTAPGRDYFRPNAWPNTPDILHAQLQGGEPAMFALRLVLAATLSANYGIYG
HHHHHHHHHCCCCCCCCCCCCCCCCCHHHEEEECCCCCHHHHHHHHHHHHHHHCCCCCCC
PAYELLEHVPREPGSEEYRDSEKYQLRHWDLERPGNLRPLIARVNHIRRAHPALQADHSL
HHHHHHHHCCCCCCCHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCHHHCCCCE
RFLPVDNEMLLAYLKRSPDGRDVIVTVVNLDPHHAQSGWMRLTPADIAIAAGDPPAADWQ
EEEECCHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCEEEECCCCEEEECCCCCCCCCH
MHDLLSQQRFLWQGDTHYVLLDPQRAPAHIFAVRRRVAGAGDIDPFQ
HHHHHHHHHHEECCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: H2O; alpha,alpha'-Trehalose 6-phosphate [C]

Specific reaction: H2O + alpha,alpha'-Trehalose 6-phosphate --> D-Glucose 6-phosphate + D-Glucose [C]

General reaction: O-Glycosyl bond hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10970853 [H]