Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610612

Identifier: 120610612

GI number: 120610612

Start: 2095290

End: 2096153

Strand: Direct

Name: 120610612

Synonym: Aave_1932

Alternate gene names: NA

Gene position: 2095290-2096153 (Clockwise)

Preceding gene: 120610611

Following gene: 120610615

Centisome position: 39.14

GC content: 68.75

Gene sequence:

>864_bases
GTGTCCGTACCCCGCCCGTTTCTGCCCCAGGAAATCCGCCCCGCCTGTGGGGAACAGCAACGGCTGACGGCCCGCCATCT
CCAGGGCTGTATTCCCGAGCTGGAGGGTTATCTGCACGCGCTGCGCCGCGAGGTCGACGACGAACTGCGGGGCACCACAC
CCCCGTACCGCAAGCCCTACCCCTACGGCTGCTGCCTGGAAATTTCCCAGGCGTTCGAGCGCAAACTGCGCGCGGCGGTG
GCATCGGAGGCTTCGCGGCCCGGCCTGGATGCCATCCGTGCCTTCATGCAGGAGGGTGGCTACGTTGGCAGCGTGTGGGG
CGCGCTGCGCGAGCGCTACTTCCAGAACGCGTTCCAGTTCGGCAGCCTGTACGTCGACGTCTCCAACGACACGGTGGACG
TGCGCAAGCCCGCCATCGAAATCCTGCCCATGGCCGAATCCGGCCTGCTGAACGTGTCCGACGTGGCGCATTTCGTCCGC
ATCGCGCGTGCCTACTGGGAAGGGGAGTACTACGTCAACGACGTGTGGCCGGCGCTGGCGCCGATCGCTCCGGTGGTGAT
GGTGGTGCCGGACCTGCAACTGGTCCGGCTCCCGACCGGCTCGGCCTACATGGTGGGTTTGCAGCGCCGCGACCGCTACC
AGTCTGCCGAGGCCTATCTTGCCGAGGGCCCGGCGCTTCCCGCCGCGGCGCGCGAAGCGCTGCTGGCACGCCTCGCACCG
CGCAGGAAGGTGGCCGATGCCCGACAGGGGCGGGCGCTGTCCCTGGCCGCCTGCGCATCGCTGCGCAAAGCCACGCCGCT
CGAAGAGACGATGTGGCTGAACCGGCAGTGCGTGGAGTGGGGCGCGTTCAACCGCACGGCTTGA

Upstream 100 bases:

>100_bases
CCGCGACGGGGCGCCGCGTCCGGTGGCTCCGCCCGGCGCCCCGGGGCACGAGAGCTTGCGGTCGAGCTAAGATGCGAGCC
CACCGTAGCCGCTCCTGTCC

Downstream 100 bases:

>100_bases
AGGCGCCGCGTCAGTACACGTCGCCCAGCGGGCAGTCCGGCGTTGCCGGTTTGGCGAGGGGCAGGTAGTAGTAGGCCGCC
GGCTGCCAGCGGCCCGGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MSVPRPFLPQEIRPACGEQQRLTARHLQGCIPELEGYLHALRREVDDELRGTTPPYRKPYPYGCCLEISQAFERKLRAAV
ASEASRPGLDAIRAFMQEGGYVGSVWGALRERYFQNAFQFGSLYVDVSNDTVDVRKPAIEILPMAESGLLNVSDVAHFVR
IARAYWEGEYYVNDVWPALAPIAPVVMVVPDLQLVRLPTGSAYMVGLQRRDRYQSAEAYLAEGPALPAAAREALLARLAP
RRKVADARQGRALSLAACASLRKATPLEETMWLNRQCVEWGAFNRTA

Sequences:

>Translated_287_residues
MSVPRPFLPQEIRPACGEQQRLTARHLQGCIPELEGYLHALRREVDDELRGTTPPYRKPYPYGCCLEISQAFERKLRAAV
ASEASRPGLDAIRAFMQEGGYVGSVWGALRERYFQNAFQFGSLYVDVSNDTVDVRKPAIEILPMAESGLLNVSDVAHFVR
IARAYWEGEYYVNDVWPALAPIAPVVMVVPDLQLVRLPTGSAYMVGLQRRDRYQSAEAYLAEGPALPAAAREALLARLAP
RRKVADARQGRALSLAACASLRKATPLEETMWLNRQCVEWGAFNRTA
>Mature_286_residues
SVPRPFLPQEIRPACGEQQRLTARHLQGCIPELEGYLHALRREVDDELRGTTPPYRKPYPYGCCLEISQAFERKLRAAVA
SEASRPGLDAIRAFMQEGGYVGSVWGALRERYFQNAFQFGSLYVDVSNDTVDVRKPAIEILPMAESGLLNVSDVAHFVRI
ARAYWEGEYYVNDVWPALAPIAPVVMVVPDLQLVRLPTGSAYMVGLQRRDRYQSAEAYLAEGPALPAAAREALLARLAPR
RKVADARQGRALSLAACASLRKATPLEETMWLNRQCVEWGAFNRTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32051; Mature: 31920

Theoretical pI: Translated: 8.34; Mature: 8.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVPRPFLPQEIRPACGEQQRLTARHLQGCIPELEGYLHALRREVDDELRGTTPPYRKPY
CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PYGCCLEISQAFERKLRAAVASEASRPGLDAIRAFMQEGGYVGSVWGALRERYFQNAFQF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GSLYVDVSNDTVDVRKPAIEILPMAESGLLNVSDVAHFVRIARAYWEGEYYVNDVWPALA
CCEEEEECCCEEECCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHH
PIAPVVMVVPDLQLVRLPTGSAYMVGLQRRDRYQSAEAYLAEGPALPAAAREALLARLAP
HHHHHHHHCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
RRKVADARQGRALSLAACASLRKATPLEETMWLNRQCVEWGAFNRTA
HHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
SVPRPFLPQEIRPACGEQQRLTARHLQGCIPELEGYLHALRREVDDELRGTTPPYRKPY
CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PYGCCLEISQAFERKLRAAVASEASRPGLDAIRAFMQEGGYVGSVWGALRERYFQNAFQF
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
GSLYVDVSNDTVDVRKPAIEILPMAESGLLNVSDVAHFVRIARAYWEGEYYVNDVWPALA
CCEEEEECCCEEECCCCHHHEEECCCCCCCCHHHHHHHHHHHHHHHCCCEEEHHHHHHHH
PIAPVVMVVPDLQLVRLPTGSAYMVGLQRRDRYQSAEAYLAEGPALPAAAREALLARLAP
HHHHHHHHCCCCEEEEECCCCEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC
RRKVADARQGRALSLAACASLRKATPLEETMWLNRQCVEWGAFNRTA
HHHHHHHHCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA