| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120610611
Identifier: 120610611
GI number: 120610611
Start: 2094506
End: 2095180
Strand: Direct
Name: 120610611
Synonym: Aave_1931
Alternate gene names: NA
Gene position: 2094506-2095180 (Clockwise)
Preceding gene: 120610610
Following gene: 120610612
Centisome position: 39.13
GC content: 66.37
Gene sequence:
>675_bases ATGCACTTCCATCGATTCACTCAACACACGCGCTATTCCATGCAATACGCTCTTCGCACCCTGGCGCTCGCTGCCCTGCT CGCACCGGCATTCGCCGGCGCCGCCACGATCGTCAGCTGTCCGGCCAACACCAATACGGGTGGCGACGGCATCTCGCGGT CTTTCTATCTGCCCAACTACGCCGGCACCACCCTCGACACCGTGACGGTGAACTATGGCACGGCGACCGCGGGCAGCTAC ACCGTGGCGCTCGAAGCGCGGCTGAACGCATTCGACGGCACGCTGGTCGGCACCGCGAATTCGACCACCACGGTTGCCGC AGCGAGCGTCGCCGGCGGCACGCCCTTCACGTTCAATTTCAACAACGTGGCGATTCCGGCGAACTCCACCATCACGTTCA AGCAGACGCTGATCGCCGGTCCGGGCTCGCTGTCCAATAATACCGGCCAGGCACCTTGTACCGGCACCGTGACGCAGACC AACGGTTCCACTCCGCCCCTCGACAGCGCCCGCCGTGCCACTCTGGCGATTACCGTGACGGGCAGCACTACGCCCGTAGG CGGTGGCGGCGGCACGGTGGCGAGCATCCCGACGCTCTCCGAATGGGGCATGGTCCTGCTGTCCGGGCTGCTGGCGCTGT TCGGCGTCGCCCGGATGCGCCGTCGCGGCCGCTGA
Upstream 100 bases:
>100_bases CTCTGGATTCGCGCCCCTGGGAACGGCCGAGCCTGGCGTGGAATGCGGAGCGCGAGGGTTCAGGGACGGCGTCGAGAAGG CAGCATGGCCTTACACTTCG
Downstream 100 bases:
>100_bases TCCGCCGGTCCGCGACGGGGCGCCGCGTCCGGTGGCTCCGCCCGGCGCCCCGGGGCACGAGAGCTTGCGGTCGAGCTAAG ATGCGAGCCCACCGTAGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 224; Mature: 224
Protein sequence:
>224_residues MHFHRFTQHTRYSMQYALRTLALAALLAPAFAGAATIVSCPANTNTGGDGISRSFYLPNYAGTTLDTVTVNYGTATAGSY TVALEARLNAFDGTLVGTANSTTTVAAASVAGGTPFTFNFNNVAIPANSTITFKQTLIAGPGSLSNNTGQAPCTGTVTQT NGSTPPLDSARRATLAITVTGSTTPVGGGGGTVASIPTLSEWGMVLLSGLLALFGVARMRRRGR
Sequences:
>Translated_224_residues MHFHRFTQHTRYSMQYALRTLALAALLAPAFAGAATIVSCPANTNTGGDGISRSFYLPNYAGTTLDTVTVNYGTATAGSY TVALEARLNAFDGTLVGTANSTTTVAAASVAGGTPFTFNFNNVAIPANSTITFKQTLIAGPGSLSNNTGQAPCTGTVTQT NGSTPPLDSARRATLAITVTGSTTPVGGGGGTVASIPTLSEWGMVLLSGLLALFGVARMRRRGR >Mature_224_residues MHFHRFTQHTRYSMQYALRTLALAALLAPAFAGAATIVSCPANTNTGGDGISRSFYLPNYAGTTLDTVTVNYGTATAGSY TVALEARLNAFDGTLVGTANSTTTVAAASVAGGTPFTFNFNNVAIPANSTITFKQTLIAGPGSLSNNTGQAPCTGTVTQT NGSTPPLDSARRATLAITVTGSTTPVGGGGGTVASIPTLSEWGMVLLSGLLALFGVARMRRRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22874; Mature: 22874
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHFHRFTQHTRYSMQYALRTLALAALLAPAFAGAATIVSCPANTNTGGDGISRSFYLPNY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCC AGTTLDTVTVNYGTATAGSYTVALEARLNAFDGTLVGTANSTTTVAAASVAGGTPFTFNF CCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCEEEEC NNVAIPANSTITFKQTLIAGPGSLSNNTGQAPCTGTVTQTNGSTPPLDSARRATLAITVT CCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEE GSTTPVGGGGGTVASIPTLSEWGMVLLSGLLALFGVARMRRRGR CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MHFHRFTQHTRYSMQYALRTLALAALLAPAFAGAATIVSCPANTNTGGDGISRSFYLPNY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCEEECCCC AGTTLDTVTVNYGTATAGSYTVALEARLNAFDGTLVGTANSTTTVAAASVAGGTPFTFNF CCCEEEEEEEECCCCCCCCEEEEEEEECCCCCCEEEECCCCCEEEEEEECCCCCCEEEEC NNVAIPANSTITFKQTLIAGPGSLSNNTGQAPCTGTVTQTNGSTPPLDSARRATLAITVT CCEEECCCCEEEEEEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCEEEEEEEE GSTTPVGGGGGTVASIPTLSEWGMVLLSGLLALFGVARMRRRGR CCCCCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA