| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is srmB [H]
Identifier: 120610574
GI number: 120610574
Start: 2049057
End: 2050916
Strand: Direct
Name: srmB [H]
Synonym: Aave_1894
Alternate gene names: 120610574
Gene position: 2049057-2050916 (Clockwise)
Preceding gene: 120610573
Following gene: 120610575
Centisome position: 38.28
GC content: 70.54
Gene sequence:
>1860_bases ATGACCGACACTTTGCAAGTGCAGGGCGCTTTCGCGCCTGCAGATTCCTCTTCCGTGGCCGCAACCGAAGCAGCCGTGGC GCCTGAGGCCCTGGCCACGGACACGGCTGCTGACGCGGCTGCGCCCCAAGCCCCGGCGGCCCCCAACGGCTTCGTCGAAC TGGGCCTCGCCCCCGAACTCGTGCAGGCCGTGGCCGACCTGGGCTACACCCAGCCCACGGGCGTGCAGGAACGCGCCATT CCCCTGGCCATGGGTGCCGGTGCCGACGCCGGCAAGTTCATCGACCTGATGGTGTCCAGCCAGACCGGCAGCGGCAAGAC GGCGGCGTTCCTGCTGCCCGTGCTGCACACGCTGATCGGCCAGCAGGCCGCGGCCCAGGCGGCCGCCCGTGCTGAATACG AGGCGGCAGTGGCCGAAGCGGCTGCCCGCGGCGAGCCTGCTCCCAAGCGCGCCAAGCGCAAGGACCCGACCAACCCGCGC CATTTCAAGGCGGCCACCCCCGGCGCCCTGGTCCTGTGCCCCACCCGCGAACTCGCCCAGCAGGTGGCCCACGACGCGAT CGAACTCGTGCGCCATTGCCGCGGCCTGCGCGTGGCGAACGTGGTGGGCGGCATTCCCTACCAGCTGCAGATCGCCAAGC TGCAGAACGCCGACCTCGTGGTGGCGACGCCCGGCCGCCTGCTGGACCTGCAGCGCTCGATGCAGATCAAGCTCGACCAG GTGCAGTTCCTGGTGGTGGACGAGGCCGACCGCATGCTGGACCTCGGCTTCTCCGACGACCTCGCCGAAATCAATGAACT CACCAGCCAGCGCAAGCAGACGATGATGTTCAGCGCGACCTTCGCGCCCCGCATCCAGCAGCTGGCGATGCGCGTCATGC ATGACGGCGGCGCCTCGGTGAAGAAGGTGCAGATCGATTCCCCGCAGGAAAAGCACGCCAACATCAAGCAGGTGCTGTTC TGGGCCGACAACGCGCAGCACAAGCGCAAGATGCTGGACCACTGGCTGCGCGACACCTCCATCAACCAGGCGGTGGTGTT CGCCAGCACGCAGGTGGAGTGCGATGGCCTGGCCAACGACCTGCAGCAGGATGGCTTTTCCGCCGTGGCGCTGCACGGTG CCCTCAGCCAGGGCCTGCGCAACCGGCGCCTGATGGCGCTGCGCAATGGCCAGGTGCAGATCCTCGTGGCCACCGATGTG GCGGCCCGCGGCATCGACGTGCCGACCATCACCCACGTGTTCAACTTCGGCCTGCCGATGAAGGCCGAGGATTACACCCA CCGCATCGGCCGCACGGGCCGCGCCGGCCGCGACGGCCTGGCGGTGACGTTCGCGGAGTTCCGCGATCGCCGCAAGATCT TCGACATCGAGGTCTACAGCAAGCAGCCGTTCAAGGCCGAAGTGATTCCGGGGCTGGAGCCCCAGCAGCGTCCTCCGCAG GCGCGCTCCGAGTTCGGCGGCCGCGGCCGTGACGGCGGCGGCTTCCGCGATCGCCGTCCCGCAGGTGGCGGCCGGGGTGG ATTCGGCGACCGCCATGGCCGCGGCCGCGATGACGGCCGGGGCTTTGCTCCCCGGGACGATCAGCGCGGTTTCGCACCCC GTGAGGATCAGCGGGGCTTTGCTCCGCGCGATGACCAGCGTGGCTTCGGCCCGCGCCGCGACGGCGAGGGCTATGGCCGC AAGCAGGGCTTCGGCGAGCCGGCGCGTGGCGGCTTCGGCGGCGGCCGTGGCGAGGGCGGTGGCCGGGGCGGTGATTTCGC TCCCCGCAAGCCGGCTTTCGCCAAACCCGGGGCGGGTGGCGGCAAGCCGTCGTTCGCGCCGCACGATGCGCGCAAGCGCC CGGCGCGTCCGGCGCGCTGA
Upstream 100 bases:
>100_bases CCGGGCGCCGGTTCTGTTGAATGGTTGATGTTTTTTAACCATTGACGGAGCCCGCGCAGGCCTCTTTGCCTGCGTTCGTC TTCGTGTGAGAAACATAGAC
Downstream 100 bases:
>100_bases GGTCCGCATGACCGCAAAGGCCAGCCCTCGAGGCTGGCTTTTTTTCGTCCATGCCACGGCGTGGGGCTTGCCGGACGCGG GTGCGTCCGATAATTCATCT
Product: DEAD/DEAH box helicase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 619; Mature: 618
Protein sequence:
>619_residues MTDTLQVQGAFAPADSSSVAATEAAVAPEALATDTAADAAAPQAPAAPNGFVELGLAPELVQAVADLGYTQPTGVQERAI PLAMGAGADAGKFIDLMVSSQTGSGKTAAFLLPVLHTLIGQQAAAQAAARAEYEAAVAEAAARGEPAPKRAKRKDPTNPR HFKAATPGALVLCPTRELAQQVAHDAIELVRHCRGLRVANVVGGIPYQLQIAKLQNADLVVATPGRLLDLQRSMQIKLDQ VQFLVVDEADRMLDLGFSDDLAEINELTSQRKQTMMFSATFAPRIQQLAMRVMHDGGASVKKVQIDSPQEKHANIKQVLF WADNAQHKRKMLDHWLRDTSINQAVVFASTQVECDGLANDLQQDGFSAVALHGALSQGLRNRRLMALRNGQVQILVATDV AARGIDVPTITHVFNFGLPMKAEDYTHRIGRTGRAGRDGLAVTFAEFRDRRKIFDIEVYSKQPFKAEVIPGLEPQQRPPQ ARSEFGGRGRDGGGFRDRRPAGGGRGGFGDRHGRGRDDGRGFAPRDDQRGFAPREDQRGFAPRDDQRGFGPRRDGEGYGR KQGFGEPARGGFGGGRGEGGGRGGDFAPRKPAFAKPGAGGGKPSFAPHDARKRPARPAR
Sequences:
>Translated_619_residues MTDTLQVQGAFAPADSSSVAATEAAVAPEALATDTAADAAAPQAPAAPNGFVELGLAPELVQAVADLGYTQPTGVQERAI PLAMGAGADAGKFIDLMVSSQTGSGKTAAFLLPVLHTLIGQQAAAQAAARAEYEAAVAEAAARGEPAPKRAKRKDPTNPR HFKAATPGALVLCPTRELAQQVAHDAIELVRHCRGLRVANVVGGIPYQLQIAKLQNADLVVATPGRLLDLQRSMQIKLDQ VQFLVVDEADRMLDLGFSDDLAEINELTSQRKQTMMFSATFAPRIQQLAMRVMHDGGASVKKVQIDSPQEKHANIKQVLF WADNAQHKRKMLDHWLRDTSINQAVVFASTQVECDGLANDLQQDGFSAVALHGALSQGLRNRRLMALRNGQVQILVATDV AARGIDVPTITHVFNFGLPMKAEDYTHRIGRTGRAGRDGLAVTFAEFRDRRKIFDIEVYSKQPFKAEVIPGLEPQQRPPQ ARSEFGGRGRDGGGFRDRRPAGGGRGGFGDRHGRGRDDGRGFAPRDDQRGFAPREDQRGFAPRDDQRGFGPRRDGEGYGR KQGFGEPARGGFGGGRGEGGGRGGDFAPRKPAFAKPGAGGGKPSFAPHDARKRPARPAR >Mature_618_residues TDTLQVQGAFAPADSSSVAATEAAVAPEALATDTAADAAAPQAPAAPNGFVELGLAPELVQAVADLGYTQPTGVQERAIP LAMGAGADAGKFIDLMVSSQTGSGKTAAFLLPVLHTLIGQQAAAQAAARAEYEAAVAEAAARGEPAPKRAKRKDPTNPRH FKAATPGALVLCPTRELAQQVAHDAIELVRHCRGLRVANVVGGIPYQLQIAKLQNADLVVATPGRLLDLQRSMQIKLDQV QFLVVDEADRMLDLGFSDDLAEINELTSQRKQTMMFSATFAPRIQQLAMRVMHDGGASVKKVQIDSPQEKHANIKQVLFW ADNAQHKRKMLDHWLRDTSINQAVVFASTQVECDGLANDLQQDGFSAVALHGALSQGLRNRRLMALRNGQVQILVATDVA ARGIDVPTITHVFNFGLPMKAEDYTHRIGRTGRAGRDGLAVTFAEFRDRRKIFDIEVYSKQPFKAEVIPGLEPQQRPPQA RSEFGGRGRDGGGFRDRRPAGGGRGGFGDRHGRGRDDGRGFAPRDDQRGFAPREDQRGFAPRDDQRGFGPRRDGEGYGRK QGFGEPARGGFGGGRGEGGGRGGDFAPRKPAFAKPGAGGGKPSFAPHDARKRPARPAR
Specific function: RNA-dependent ATPase activity. Probably interacts with 23S ribosomal RNA [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI169881239, Length=489, Percent_Identity=34.7648261758691, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI13514809, Length=489, Percent_Identity=34.7648261758691, Blast_Score=226, Evalue=4e-59, Organism=Homo sapiens, GI301171467, Length=478, Percent_Identity=35.1464435146443, Blast_Score=223, Evalue=5e-58, Organism=Homo sapiens, GI87196351, Length=437, Percent_Identity=35.4691075514874, Blast_Score=221, Evalue=2e-57, Organism=Homo sapiens, GI301171475, Length=438, Percent_Identity=35.3881278538813, Blast_Score=220, Evalue=3e-57, Organism=Homo sapiens, GI45446747, Length=412, Percent_Identity=33.252427184466, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI45446743, Length=412, Percent_Identity=33.252427184466, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI41327771, Length=429, Percent_Identity=31.4685314685315, Blast_Score=207, Evalue=2e-53, Organism=Homo sapiens, GI4758138, Length=419, Percent_Identity=31.7422434367542, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI13518015, Length=418, Percent_Identity=33.0143540669856, Blast_Score=206, Evalue=5e-53, Organism=Homo sapiens, GI216548263, Length=418, Percent_Identity=33.0143540669856, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI262231852, Length=418, Percent_Identity=33.0143540669856, Blast_Score=206, Evalue=7e-53, Organism=Homo sapiens, GI262118318, Length=417, Percent_Identity=32.8537170263789, Blast_Score=202, Evalue=7e-52, Organism=Homo sapiens, GI222352149, Length=407, Percent_Identity=32.9238329238329, Blast_Score=201, Evalue=2e-51, Organism=Homo sapiens, GI188035877, Length=395, Percent_Identity=32.4050632911392, Blast_Score=199, Evalue=6e-51, Organism=Homo sapiens, GI148613856, Length=390, Percent_Identity=33.8461538461538, Blast_Score=199, Evalue=8e-51, Organism=Homo sapiens, GI38201710, Length=390, Percent_Identity=33.8461538461538, Blast_Score=199, Evalue=8e-51, Organism=Homo sapiens, GI41327773, Length=408, Percent_Identity=31.6176470588235, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI21071032, Length=412, Percent_Identity=32.2815533980583, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI20149629, Length=453, Percent_Identity=31.1258278145695, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI224593278, Length=428, Percent_Identity=31.7757009345794, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI164664518, Length=412, Percent_Identity=29.6116504854369, Blast_Score=185, Evalue=9e-47, Organism=Homo sapiens, GI55749865, Length=402, Percent_Identity=30.0995024875622, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI21040371, Length=425, Percent_Identity=28.7058823529412, Blast_Score=180, Evalue=4e-45, Organism=Homo sapiens, GI4758112, Length=425, Percent_Identity=28.9411764705882, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI18375623, Length=425, Percent_Identity=28.9411764705882, Blast_Score=179, Evalue=5e-45, Organism=Homo sapiens, GI164419743, Length=413, Percent_Identity=30.2663438256659, Blast_Score=179, Evalue=7e-45, Organism=Homo sapiens, GI51094101, Length=413, Percent_Identity=30.2663438256659, Blast_Score=179, Evalue=8e-45, Organism=Homo sapiens, GI7661920, Length=410, Percent_Identity=29.0243902439024, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI50659095, Length=390, Percent_Identity=31.7948717948718, Blast_Score=171, Evalue=2e-42, Organism=Homo sapiens, GI31542656, Length=422, Percent_Identity=32.7014218009479, Blast_Score=167, Evalue=3e-41, Organism=Homo sapiens, GI13129006, Length=389, Percent_Identity=30.8483290488432, Blast_Score=160, Evalue=2e-39, Organism=Homo sapiens, GI6005743, Length=423, Percent_Identity=29.0780141843972, Blast_Score=156, Evalue=5e-38, Organism=Homo sapiens, GI9506931, Length=428, Percent_Identity=30.8411214953271, Blast_Score=155, Evalue=9e-38, Organism=Homo sapiens, GI8922886, Length=423, Percent_Identity=28.6052009456265, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI164419732, Length=401, Percent_Identity=28.6783042394015, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI83700235, Length=414, Percent_Identity=29.7101449275362, Blast_Score=151, Evalue=2e-36, Organism=Homo sapiens, GI41327779, Length=402, Percent_Identity=30.0995024875622, Blast_Score=150, Evalue=4e-36, Organism=Homo sapiens, GI4503529, Length=414, Percent_Identity=27.7777777777778, Blast_Score=147, Evalue=3e-35, Organism=Homo sapiens, GI4826686, Length=350, Percent_Identity=30.5714285714286, Blast_Score=144, Evalue=4e-34, Organism=Homo sapiens, GI38569505, Length=402, Percent_Identity=28.8557213930348, Blast_Score=143, Evalue=4e-34, Organism=Homo sapiens, GI62241022, Length=397, Percent_Identity=28.463476070529, Blast_Score=142, Evalue=7e-34, Organism=Homo sapiens, GI13514831, Length=398, Percent_Identity=28.643216080402, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI38569503, Length=402, Percent_Identity=28.8557213930348, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI38327634, Length=380, Percent_Identity=29.4736842105263, Blast_Score=140, Evalue=3e-33, Organism=Homo sapiens, GI256223453, Length=426, Percent_Identity=25.5868544600939, Blast_Score=137, Evalue=4e-32, Organism=Homo sapiens, GI17505907, Length=468, Percent_Identity=27.5641025641026, Blast_Score=130, Evalue=3e-30, Organism=Homo sapiens, GI62241024, Length=369, Percent_Identity=28.7262872628726, Blast_Score=129, Evalue=7e-30, Organism=Homo sapiens, GI9966805, Length=311, Percent_Identity=32.1543408360129, Blast_Score=126, Evalue=6e-29, Organism=Homo sapiens, GI41327776, Length=453, Percent_Identity=26.4900662251656, Blast_Score=123, Evalue=5e-28, Organism=Homo sapiens, GI256773275, Length=436, Percent_Identity=28.2110091743119, Blast_Score=115, Evalue=2e-25, Organism=Homo sapiens, GI154759257, Length=457, Percent_Identity=27.5711159737418, Blast_Score=113, Evalue=6e-25, Organism=Homo sapiens, GI20336298, Length=252, Percent_Identity=30.952380952381, Blast_Score=103, Evalue=7e-22, Organism=Homo sapiens, GI4557365, Length=214, Percent_Identity=26.6355140186916, Blast_Score=69, Evalue=2e-11, Organism=Escherichia coli, GI1787016, Length=428, Percent_Identity=37.1495327102804, Blast_Score=258, Evalue=6e-70, Organism=Escherichia coli, GI1788930, Length=422, Percent_Identity=36.7298578199052, Blast_Score=236, Evalue=3e-63, Organism=Escherichia coli, GI87082221, Length=424, Percent_Identity=35.8490566037736, Blast_Score=231, Evalue=8e-62, Organism=Escherichia coli, GI1790214, Length=412, Percent_Identity=33.252427184466, Blast_Score=211, Evalue=2e-55, Organism=Escherichia coli, GI1787605, Length=477, Percent_Identity=33.1236897274633, Blast_Score=201, Evalue=1e-52, Organism=Caenorhabditis elegans, GI71995514, Length=441, Percent_Identity=35.1473922902494, Blast_Score=229, Evalue=3e-60, Organism=Caenorhabditis elegans, GI17510309, Length=441, Percent_Identity=35.1473922902494, Blast_Score=229, Evalue=5e-60, Organism=Caenorhabditis elegans, GI17510307, Length=441, Percent_Identity=35.1473922902494, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI71995718, Length=437, Percent_Identity=33.1807780320366, Blast_Score=213, Evalue=3e-55, Organism=Caenorhabditis elegans, GI32565321, Length=447, Percent_Identity=32.8859060402685, Blast_Score=206, Evalue=4e-53, Organism=Caenorhabditis elegans, GI115533224, Length=469, Percent_Identity=33.0490405117271, Blast_Score=200, Evalue=2e-51, Organism=Caenorhabditis elegans, GI17555296, Length=414, Percent_Identity=33.0917874396135, Blast_Score=196, Evalue=3e-50, Organism=Caenorhabditis elegans, GI71982858, Length=444, Percent_Identity=29.5045045045045, Blast_Score=191, Evalue=7e-49, Organism=Caenorhabditis elegans, GI86570094, Length=415, Percent_Identity=32.289156626506, Blast_Score=191, Evalue=1e-48, Organism=Caenorhabditis elegans, GI17507879, Length=411, Percent_Identity=30.9002433090024, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI17552642, Length=505, Percent_Identity=30.4950495049505, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI71999644, Length=398, Percent_Identity=32.9145728643216, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI17507877, Length=411, Percent_Identity=30.9002433090024, Blast_Score=186, Evalue=4e-47, Organism=Caenorhabditis elegans, GI71999646, Length=398, Percent_Identity=32.9145728643216, Blast_Score=186, Evalue=4e-47, Organism=Caenorhabditis elegans, GI17537549, Length=396, Percent_Identity=33.8383838383838, Blast_Score=184, Evalue=2e-46, Organism=Caenorhabditis elegans, GI71995724, Length=426, Percent_Identity=29.3427230046948, Blast_Score=181, Evalue=1e-45, Organism=Caenorhabditis elegans, GI17507945, Length=409, Percent_Identity=31.5403422982885, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17507121, Length=426, Percent_Identity=29.1079812206573, Blast_Score=180, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17552114, Length=410, Percent_Identity=28.780487804878, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI17507881, Length=404, Percent_Identity=30.6930693069307, Blast_Score=175, Evalue=6e-44, Organism=Caenorhabditis elegans, GI71987143, Length=412, Percent_Identity=28.1553398058252, Blast_Score=168, Evalue=9e-42, Organism=Caenorhabditis elegans, GI17510559, Length=433, Percent_Identity=29.0993071593533, Blast_Score=165, Evalue=5e-41, Organism=Caenorhabditis elegans, GI71990816, Length=392, Percent_Identity=28.5714285714286, Blast_Score=149, Evalue=5e-36, Organism=Caenorhabditis elegans, GI17536103, Length=440, Percent_Identity=24.7727272727273, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI193208216, Length=449, Percent_Identity=25.8351893095768, Blast_Score=146, Evalue=4e-35, Organism=Caenorhabditis elegans, GI115532548, Length=407, Percent_Identity=29.7297297297297, Blast_Score=145, Evalue=5e-35, Organism=Caenorhabditis elegans, GI115532546, Length=411, Percent_Identity=29.683698296837, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17509811, Length=393, Percent_Identity=29.2620865139949, Blast_Score=144, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17536101, Length=438, Percent_Identity=24.6575342465753, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17536099, Length=438, Percent_Identity=24.6575342465753, Blast_Score=141, Evalue=9e-34, Organism=Caenorhabditis elegans, GI193206561, Length=400, Percent_Identity=26.75, Blast_Score=135, Evalue=5e-32, Organism=Caenorhabditis elegans, GI17508543, Length=426, Percent_Identity=25.8215962441315, Blast_Score=127, Evalue=3e-29, Organism=Caenorhabditis elegans, GI17507641, Length=431, Percent_Identity=26.9141531322506, Blast_Score=125, Evalue=5e-29, Organism=Caenorhabditis elegans, GI17505370, Length=389, Percent_Identity=27.5064267352185, Blast_Score=125, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17556951, Length=454, Percent_Identity=27.3127753303965, Blast_Score=124, Evalue=2e-28, Organism=Caenorhabditis elegans, GI25148203, Length=440, Percent_Identity=22.5, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI32564046, Length=418, Percent_Identity=26.7942583732057, Blast_Score=114, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71982862, Length=250, Percent_Identity=30, Blast_Score=113, Evalue=3e-25, Organism=Caenorhabditis elegans, GI25148291, Length=341, Percent_Identity=27.8592375366569, Blast_Score=106, Evalue=3e-23, Organism=Caenorhabditis elegans, GI71997889, Length=394, Percent_Identity=24.6192893401015, Blast_Score=99, Evalue=5e-21, Organism=Caenorhabditis elegans, GI25148205, Length=324, Percent_Identity=23.1481481481481, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71987152, Length=99, Percent_Identity=40.4040404040404, Blast_Score=91, Evalue=3e-18, Organism=Caenorhabditis elegans, GI17553716, Length=403, Percent_Identity=22.5806451612903, Blast_Score=90, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6324778, Length=417, Percent_Identity=35.4916067146283, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6325138, Length=413, Percent_Identity=35.8353510895884, Blast_Score=218, Evalue=3e-57, Organism=Saccharomyces cerevisiae, GI6324217, Length=405, Percent_Identity=34.8148148148148, Blast_Score=208, Evalue=2e-54, Organism=Saccharomyces cerevisiae, GI6321360, Length=447, Percent_Identity=32.8859060402685, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6323021, Length=423, Percent_Identity=32.8605200945626, Blast_Score=196, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320449, Length=413, Percent_Identity=32.2033898305085, Blast_Score=192, Evalue=1e-49, Organism=Saccharomyces cerevisiae, GI6321856, Length=414, Percent_Identity=33.0917874396135, Blast_Score=188, Evalue=2e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=431, Percent_Identity=30.1624129930394, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320041, Length=411, Percent_Identity=29.4403892944039, Blast_Score=180, Evalue=6e-46, Organism=Saccharomyces cerevisiae, GI6320119, Length=421, Percent_Identity=28.2660332541568, Blast_Score=175, Evalue=2e-44, Organism=Saccharomyces cerevisiae, GI6320224, Length=425, Percent_Identity=28.4705882352941, Blast_Score=166, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320400, Length=414, Percent_Identity=26.8115942028986, Blast_Score=158, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6323947, Length=417, Percent_Identity=29.4964028776978, Blast_Score=149, Evalue=9e-37, Organism=Saccharomyces cerevisiae, GI6319714, Length=522, Percent_Identity=26.4367816091954, Blast_Score=147, Evalue=3e-36, Organism=Saccharomyces cerevisiae, GI6322912, Length=414, Percent_Identity=28.2608695652174, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6322323, Length=414, Percent_Identity=28.2608695652174, Blast_Score=145, Evalue=2e-35, Organism=Saccharomyces cerevisiae, GI6320173, Length=466, Percent_Identity=25.3218884120172, Blast_Score=144, Evalue=3e-35, Organism=Saccharomyces cerevisiae, GI6323306, Length=453, Percent_Identity=26.0485651214128, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6321111, Length=419, Percent_Identity=27.2076372315036, Blast_Score=141, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6322427, Length=411, Percent_Identity=26.5206812652068, Blast_Score=137, Evalue=7e-33, Organism=Saccharomyces cerevisiae, GI6321963, Length=419, Percent_Identity=28.8782816229117, Blast_Score=131, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6321267, Length=401, Percent_Identity=27.1820448877805, Blast_Score=126, Evalue=1e-29, Organism=Saccharomyces cerevisiae, GI6322876, Length=270, Percent_Identity=29.6296296296296, Blast_Score=104, Evalue=4e-23, Organism=Drosophila melanogaster, GI17985987, Length=434, Percent_Identity=34.1013824884793, Blast_Score=215, Evalue=8e-56, Organism=Drosophila melanogaster, GI24662330, Length=409, Percent_Identity=32.7628361858191, Blast_Score=210, Evalue=3e-54, Organism=Drosophila melanogaster, GI24584399, Length=404, Percent_Identity=32.1782178217822, Blast_Score=205, Evalue=7e-53, Organism=Drosophila melanogaster, GI21355075, Length=392, Percent_Identity=31.6326530612245, Blast_Score=203, Evalue=3e-52, Organism=Drosophila melanogaster, GI28574962, Length=433, Percent_Identity=32.3325635103926, Blast_Score=202, Evalue=7e-52, Organism=Drosophila melanogaster, GI24584994, Length=464, Percent_Identity=31.0344827586207, Blast_Score=202, Evalue=8e-52, Organism=Drosophila melanogaster, GI21356161, Length=436, Percent_Identity=32.3394495412844, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI18857967, Length=519, Percent_Identity=28.5163776493256, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24585582, Length=490, Percent_Identity=31.6326530612245, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI24644479, Length=408, Percent_Identity=34.0686274509804, Blast_Score=192, Evalue=5e-49, Organism=Drosophila melanogaster, GI24644483, Length=408, Percent_Identity=34.0686274509804, Blast_Score=192, Evalue=6e-49, Organism=Drosophila melanogaster, GI281361218, Length=408, Percent_Identity=34.0686274509804, Blast_Score=192, Evalue=7e-49, Organism=Drosophila melanogaster, GI24644481, Length=408, Percent_Identity=34.0686274509804, Blast_Score=192, Evalue=7e-49, Organism=Drosophila melanogaster, GI24644487, Length=408, Percent_Identity=34.0686274509804, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI45551833, Length=408, Percent_Identity=34.0686274509804, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24644485, Length=408, Percent_Identity=34.0686274509804, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI24642151, Length=411, Percent_Identity=31.6301703163017, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI28575014, Length=416, Percent_Identity=30.5288461538462, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI17977678, Length=412, Percent_Identity=32.2815533980583, Blast_Score=177, Evalue=2e-44, Organism=Drosophila melanogaster, GI24583281, Length=412, Percent_Identity=29.8543689320388, Blast_Score=176, Evalue=4e-44, Organism=Drosophila melanogaster, GI24583279, Length=412, Percent_Identity=29.8543689320388, Blast_Score=176, Evalue=5e-44, Organism=Drosophila melanogaster, GI24581954, Length=452, Percent_Identity=28.0973451327434, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24581952, Length=452, Percent_Identity=28.0973451327434, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI24581956, Length=452, Percent_Identity=28.0973451327434, Blast_Score=173, Evalue=3e-43, Organism=Drosophila melanogaster, GI17136814, Length=407, Percent_Identity=32.1867321867322, Blast_Score=165, Evalue=7e-41, Organism=Drosophila melanogaster, GI24645031, Length=411, Percent_Identity=28.2238442822384, Blast_Score=162, Evalue=7e-40, Organism=Drosophila melanogaster, GI281365720, Length=401, Percent_Identity=31.1720698254364, Blast_Score=157, Evalue=2e-38, Organism=Drosophila melanogaster, GI18859659, Length=470, Percent_Identity=28.5106382978723, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI28571338, Length=470, Percent_Identity=28.5106382978723, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI20130173, Length=482, Percent_Identity=28.2157676348548, Blast_Score=145, Evalue=7e-35, Organism=Drosophila melanogaster, GI17647335, Length=413, Percent_Identity=25.90799031477, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI28571808, Length=405, Percent_Identity=30.3703703703704, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI28571809, Length=405, Percent_Identity=30.3703703703704, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24582080, Length=447, Percent_Identity=27.5167785234899, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24582078, Length=447, Percent_Identity=27.5167785234899, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI17136248, Length=447, Percent_Identity=27.5167785234899, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24582075, Length=447, Percent_Identity=27.5167785234899, Blast_Score=140, Evalue=2e-33, Organism=Drosophila melanogaster, GI24666101, Length=400, Percent_Identity=28.5, Blast_Score=138, Evalue=1e-32, Organism=Drosophila melanogaster, GI21355559, Length=408, Percent_Identity=30.1470588235294, Blast_Score=134, Evalue=1e-31, Organism=Drosophila melanogaster, GI24668515, Length=326, Percent_Identity=30.3680981595092, Blast_Score=129, Evalue=4e-30, Organism=Drosophila melanogaster, GI19920478, Length=411, Percent_Identity=25.0608272506083, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI24642822, Length=444, Percent_Identity=27.7027027027027, Blast_Score=126, Evalue=4e-29, Organism=Drosophila melanogaster, GI24643725, Length=440, Percent_Identity=25, Blast_Score=115, Evalue=8e-26, Organism=Drosophila melanogaster, GI24640164, Length=433, Percent_Identity=22.6327944572748, Blast_Score=80, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 66258; Mature: 66126
Theoretical pI: Translated: 10.25; Mature: 10.25
Prosite motif: PS00039 DEAD_ATP_HELICASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDTLQVQGAFAPADSSSVAATEAAVAPEALATDTAADAAAPQAPAAPNGFVELGLAPEL CCCCEEEEEEECCCCCCCCHHHHHHHCCHHHHHCCHHHHCCCCCCCCCCCCEEECCCHHH VQAVADLGYTQPTGVQERAIPLAMGAGADAGKFIDLMVSSQTGSGKTAAFLLPVLHTLIG HHHHHHCCCCCCCCCHHHCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC QQAAAQAAARAEYEAAVAEAAARGEPAPKRAKRKDPTNPRHFKAATPGALVLCPTRELAQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEECCCCCEEEEECCHHHHH QVAHDAIELVRHCRGLRVANVVGGIPYQLQIAKLQNADLVVATPGRLLDLQRSMQIKLDQ HHHHHHHHHHHHHCCCEEHHHHCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHEEEEE VQFLVVDEADRMLDLGFSDDLAEINELTSQRKQTMMFSATFAPRIQQLAMRVMHDGGASV EEEEEEECCCHHEECCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCE KKVQIDSPQEKHANIKQVLFWADNAQHKRKMLDHWLRDTSINQAVVFASTQVECDGLAND EEEECCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCEEHHHHHHH LQQDGFSAVALHGALSQGLRNRRLMALRNGQVQILVATDVAARGIDVPTITHVFNFGLPM HHHCCCHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEECHHHCCCCCCHHHHHHHCCCCC KAEDYTHRIGRTGRAGRDGLAVTFAEFRDRRKIFDIEVYSKQPFKAEVIPGLEPQQRPPQ CCHHHHHHHCCCCCCCCCCCEEEHHHHHCCCEEEEEEEECCCCCCEECCCCCCCCCCCCH ARSEFGGRGRDGGGFRDRRPAGGGRGGFGDRHGRGRDDGRGFAPRDDQRGFAPREDQRGF HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APRDDQRGFGPRRDGEGYGRKQGFGEPARGGFGGGRGEGGGRGGDFAPRKPAFAKPGAGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKPSFAPHDARKRPARPAR CCCCCCCCCHHCCCCCCCC >Mature Secondary Structure TDTLQVQGAFAPADSSSVAATEAAVAPEALATDTAADAAAPQAPAAPNGFVELGLAPEL CCCEEEEEEECCCCCCCCHHHHHHHCCHHHHHCCHHHHCCCCCCCCCCCCEEECCCHHH VQAVADLGYTQPTGVQERAIPLAMGAGADAGKFIDLMVSSQTGSGKTAAFLLPVLHTLIG HHHHHHCCCCCCCCCHHHCEEEEECCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC QQAAAQAAARAEYEAAVAEAAARGEPAPKRAKRKDPTNPRHFKAATPGALVLCPTRELAQ HHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCEEECCCCCEEEEECCHHHHH QVAHDAIELVRHCRGLRVANVVGGIPYQLQIAKLQNADLVVATPGRLLDLQRSMQIKLDQ HHHHHHHHHHHHHCCCEEHHHHCCCCCEEEEEEECCCCEEEECCCHHHHHHHHHHEEEEE VQFLVVDEADRMLDLGFSDDLAEINELTSQRKQTMMFSATFAPRIQQLAMRVMHDGGASV EEEEEEECCCHHEECCCCCHHHHHHHHHHHHHHHEEEEHHHHHHHHHHHHHHHHCCCCCE KKVQIDSPQEKHANIKQVLFWADNAQHKRKMLDHWLRDTSINQAVVFASTQVECDGLAND EEEECCCCHHHHCCEEEEEEECCCHHHHHHHHHHHHHCCCCCCEEEEEECCEEHHHHHHH LQQDGFSAVALHGALSQGLRNRRLMALRNGQVQILVATDVAARGIDVPTITHVFNFGLPM HHHCCCHHHHHHHHHHHHHHHCEEEEEECCCEEEEEEECHHHCCCCCCHHHHHHHCCCCC KAEDYTHRIGRTGRAGRDGLAVTFAEFRDRRKIFDIEVYSKQPFKAEVIPGLEPQQRPPQ CCHHHHHHHCCCCCCCCCCCEEEHHHHHCCCEEEEEEEECCCCCCEECCCCCCCCCCCCH ARSEFGGRGRDGGGFRDRRPAGGGRGGFGDRHGRGRDDGRGFAPRDDQRGFAPREDQRGF HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC APRDDQRGFGPRRDGEGYGRKQGFGEPARGGFGGGRGEGGGRGGDFAPRKPAFAKPGAGG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GKPSFAPHDARKRPARPAR CCCCCCCCCHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]