| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is lpxA
Identifier: 120610515
GI number: 120610515
Start: 1989396
End: 1990184
Strand: Direct
Name: lpxA
Synonym: Aave_1835
Alternate gene names: 120610515
Gene position: 1989396-1990184 (Clockwise)
Preceding gene: 120610514
Following gene: 120610516
Centisome position: 37.17
GC content: 68.69
Gene sequence:
>789_bases ATGAGCAGCATCCATTCCACGGCCATCGTCGATCCGGGCGCCGAGCTGGACAGCTCGGTCACCGTCGGCCCCTATGCGGT CATCGGCCCCAAGGTGCGCATCGGGGCCGGGACGAGCGTCGGGCCGCACTGCGTCATCGAGGGCCGCACGACGATCGGGC GCGACAACCGGATCTTCCAGTTCGCCTCGCTCGGCGCGATTCCGCAGGACAAGAAATACGCCGGGGAAGACACCTGCCTG GAGATCGGCGACCGCAACACGATCCGCGAGTTCTGCACCTTCAACCTCGGCGTGCCGGGCGCGGGGGGCGTCACGCGCGT GGGCGACGACAACTGGATCATGGCCTACTGCCACATCGCGCACGACTGCCTGGTGGGCAACCACACCACGCTCTCGAACA ACACCACGCTGGCCGGGCACGTCGAGCTGGGCGACTGGGTGACCGTCGGCGGGCTGGTGGGCATCCACCAGTTCGTGAAG ATCGGCGCGCACGCGATGGTGGGGTTCGCTTCGGCGGTATCGCAGGACGTGCCCCCCTTCATGCTGGTCGATGGCAATCC GATGGGCGTGCGCGGCTTCAACATCGTGGGCCTGAAGCGCCGCGGCTTCTCCGCGGACCGCCTCGCCGCGGTCAAGCAGA TGCATCGCCTGCTGTACCGCCAGGGGCTGACGCTGGAGGCGGCCGCCAAGGCGATCGAGGAGCTTGCGGCCGAGCACCCC GAGGCCGCGGGCGACATCACCCTGCTGCGCGATTTCATCGTCTCCTCGACGCGCGGCATCGCGCGCTGA
Upstream 100 bases:
>100_bases AGTTCGGCGGCGTGGCGCGCGTGGGCGACAGCGTGGCCTGCGAAGCCGAGATCATGTGCACCATGCGGACCGTCGCCTGA AGGGCTGAGGGCGCGGGACC
Downstream 100 bases:
>100_bases AGGGAAGCGCGCAGCCATGCAAGACGCCCTTCGCATCGCGATGGTGGCCGGCGAGACGTCCGGCGACCTGCTCGCCGGCC TGCTCCTGGACGGCCTGCAC
Product: acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MSSIHSTAIVDPGAELDSSVTVGPYAVIGPKVRIGAGTSVGPHCVIEGRTTIGRDNRIFQFASLGAIPQDKKYAGEDTCL EIGDRNTIREFCTFNLGVPGAGGVTRVGDDNWIMAYCHIAHDCLVGNHTTLSNNTTLAGHVELGDWVTVGGLVGIHQFVK IGAHAMVGFASAVSQDVPPFMLVDGNPMGVRGFNIVGLKRRGFSADRLAAVKQMHRLLYRQGLTLEAAAKAIEELAAEHP EAAGDITLLRDFIVSSTRGIAR
Sequences:
>Translated_262_residues MSSIHSTAIVDPGAELDSSVTVGPYAVIGPKVRIGAGTSVGPHCVIEGRTTIGRDNRIFQFASLGAIPQDKKYAGEDTCL EIGDRNTIREFCTFNLGVPGAGGVTRVGDDNWIMAYCHIAHDCLVGNHTTLSNNTTLAGHVELGDWVTVGGLVGIHQFVK IGAHAMVGFASAVSQDVPPFMLVDGNPMGVRGFNIVGLKRRGFSADRLAAVKQMHRLLYRQGLTLEAAAKAIEELAAEHP EAAGDITLLRDFIVSSTRGIAR >Mature_261_residues SSIHSTAIVDPGAELDSSVTVGPYAVIGPKVRIGAGTSVGPHCVIEGRTTIGRDNRIFQFASLGAIPQDKKYAGEDTCLE IGDRNTIREFCTFNLGVPGAGGVTRVGDDNWIMAYCHIAHDCLVGNHTTLSNNTTLAGHVELGDWVTVGGLVGIHQFVKI GAHAMVGFASAVSQDVPPFMLVDGNPMGVRGFNIVGLKRRGFSADRLAAVKQMHRLLYRQGLTLEAAAKAIEELAAEHPE AAGDITLLRDFIVSSTRGIAR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily
Homologues:
Organism=Escherichia coli, GI1786378, Length=259, Percent_Identity=49.8069498069498, Blast_Score=263, Evalue=7e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LPXA_ACIAC (A1TN81)
Other databases:
- EMBL: CP000512 - RefSeq: YP_970193.1 - ProteinModelPortal: A1TN81 - STRING: A1TN81 - GeneID: 4665655 - GenomeReviews: CP000512_GR - KEGG: aav:Aave_1835 - NMPDR: fig|397945.5.peg.1588 - eggNOG: COG1043 - HOGENOM: HBG659295 - OMA: DLKYQGE - PhylomeDB: A1TN81 - BioCyc: AAVE397945:AAVE_1835-MONOMER - GO: GO:0005737 - HAMAP: MF_00387 - InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR010137 - InterPro: IPR011004 - PIRSF: PIRSF000456 - TIGRFAMs: TIGR01852
Pfam domain/function: PF00132 Hexapep; SSF51161 Trimer_LpxA_like
EC number: =2.3.1.129
Molecular weight: Translated: 27774; Mature: 27643
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIHSTAIVDPGAELDSSVTVGPYAVIGPKVRIGAGTSVGPHCVIEGRTTIGRDNRIFQ CCCCCCCEEECCCCCCCCCEEECCEEEECCEEEECCCCCCCCEEEEECCCEECCCCCEEE FASLGAIPQDKKYAGEDTCLEIGDRNTIREFCTFNLGVPGAGGVTRVGDDNWIMAYCHIA EECCCCCCCCCCCCCCCCEEEECCCHHHHHHHEECCCCCCCCCCEEECCCCEEEEEEEHH HDCLVGNHTTLSNNTTLAGHVELGDWVTVGGLVGIHQFVKIGAHAMVGFASAVSQDVPPF HHHCCCCCEEECCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE MLVDGNPMGVRGFNIVGLKRRGFSADRLAAVKQMHRLLYRQGLTLEAAAKAIEELAAEHP EEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC EAAGDITLLRDFIVSSTRGIAR CCCCHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SSIHSTAIVDPGAELDSSVTVGPYAVIGPKVRIGAGTSVGPHCVIEGRTTIGRDNRIFQ CCCCCCEEECCCCCCCCCEEECCEEEECCEEEECCCCCCCCEEEEECCCEECCCCCEEE FASLGAIPQDKKYAGEDTCLEIGDRNTIREFCTFNLGVPGAGGVTRVGDDNWIMAYCHIA EECCCCCCCCCCCCCCCCEEEECCCHHHHHHHEECCCCCCCCCCEEECCCCEEEEEEEHH HDCLVGNHTTLSNNTTLAGHVELGDWVTVGGLVGIHQFVKIGAHAMVGFASAVSQDVPPF HHHCCCCCEEECCCCEEEEEEECCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCE MLVDGNPMGVRGFNIVGLKRRGFSADRLAAVKQMHRLLYRQGLTLEAAAKAIEELAAEHP EEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC EAAGDITLLRDFIVSSTRGIAR CCCCHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA