Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120610485

Identifier: 120610485

GI number: 120610485

Start: 1958502

End: 1959554

Strand: Reverse

Name: 120610485

Synonym: Aave_1804

Alternate gene names: NA

Gene position: 1959554-1958502 (Counterclockwise)

Preceding gene: 120610486

Following gene: 120610484

Centisome position: 36.61

GC content: 74.64

Gene sequence:

>1053_bases
ATGTCTAACCGCCCCATCTCCCCCGGCTCCATCACCCAGGTAGCAGGCATCGAAGTCGGCCACTTCACCTCCCCCCTCCG
CCCCACCGGCTGCACCGTCGTCATCGCCCGCGAAGGCGCCGTGGCAGGCGTGGATGTGCGCGGCGCGGCCCCCGGCACGC
GCGAAACCGATCTGCTGGAGCCCACGCACCTGGTCGACCGCATCCATGCCGTGATGCTGGCCGGCGGCAGCGCGTTCGGG
CTGGATGCGGCGGCGGGCGCGGTGCGGTGGCTGGAGGAGCGCGGTATCGGGTTCGACGTGGGGGTGGCGCGGGTGCCGCT
GGTGCCGGCGGCGGTGCTGTTCGATCTGCACGTGGGCGATGCGCGCATCCGGCCCGATGTGGCGGCGGGCTATGCGGCGT
GCGAGGCGGCTGCCGCTGCAGCTTCTTCGGGTGCGGCGGCCATGCCGCTGGCCGAGGGCTGCGTGGGCGCGGGCGCCGGA
GCAGCCGTGGGCAAGCTGTTCGGCATGGCGCATGCGATGAAGGGCGGCATCGGCAGCGCATCGGTCACCGTGGATGGCGT
GACGGTGGGCGCGCTGGTGGCCTGCAATGCGGTGGGCGACGTGGTGGACCCGGAGACGGGCCGCCCGGTGGCCGGCGCTC
GCACGGCCGATGGCCTGCACCTGCGCGATACGCGCCGCGCGCTGCTGGCGGGCGATGCGCCGCGCACGCTGCTTGCGGGC
ACCAACACCACGATCGGCGTGGTGGCGACCGATGCGGTGATCACCAAGGCGCAGGCGCGCCGGCTGGCGGTGTGCGCGCA
CGACGGGCTGGCGCGGGCGATCAATCCGGTGCACACGCTGTCGGATGGCGACACGCTGTTCGCGCTGGGCACCGGACGGG
CGGGCAAGCCGCTCGGGATGATGTTGCTCTCCACCATGGCGGCCGAGGCGACGGCGCGCGCCACGCTGCGCTCGGTGCTG
GCGGCGCGCTCGCTGACCACGGCCGAGGGGCTGCACCTGCCCTGCGCGGCCGACGTCGCCGGCACGGCGCCCTGGGGAGC
GGGCTGGCCATGA

Upstream 100 bases:

>100_bases
CAGGTGCCATCCACCACTGAGTCGCGTCGTTTTCAGGCCTGACAGGCTTACGCTATGGTTGCGCCCTCAGCCGCTTCCCT
ACATCACCCCAGCGCCTCAC

Downstream 100 bases:

>100_bases
ACGTCATGCTTGCCGCGCGGTCGCGCACCGCGGCCCGGCGCGTGCGCACGGCGCTGCTGAACGTGCGCGACCTGCTGCTG
TCGGCCGGGCCGCTGGCCTT

Product: peptidase S58, DmpA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MSNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLEPTHLVDRIHAVMLAGGSAFG
LDAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGDARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAG
AAVGKLFGMAHAMKGGIGSASVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAG
TNTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGMMLLSTMAAEATARATLRSVL
AARSLTTAEGLHLPCAADVAGTAPWGAGWP

Sequences:

>Translated_350_residues
MSNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLEPTHLVDRIHAVMLAGGSAFG
LDAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGDARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAG
AAVGKLFGMAHAMKGGIGSASVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAG
TNTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGMMLLSTMAAEATARATLRSVL
AARSLTTAEGLHLPCAADVAGTAPWGAGWP
>Mature_349_residues
SNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLEPTHLVDRIHAVMLAGGSAFGL
DAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGDARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAGA
AVGKLFGMAHAMKGGIGSASVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAGT
NTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGMMLLSTMAAEATARATLRSVLA
ARSLTTAEGLHLPCAADVAGTAPWGAGWP

Specific function: Unknown

COG id: COG3191

COG function: function code EQ; L-aminopeptidase/D-esterase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.tuberculosis Rv1333 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016117
- InterPro:   IPR005321 [H]

Pfam domain/function: PF03576 Peptidase_S58 [H]

EC number: NA

Molecular weight: Translated: 34723; Mature: 34592

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLE
CCCCCCCCCCCEEEECEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
PTHLVDRIHAVMLAGGSAFGLDAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGD
HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCEECCHHHCCCCCEEEEEEEECCC
ARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAGAAVGKLFGMAHAMKGGIGSA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
SVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAG
EEEECCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEC
TNTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGM
CCCEEEEEECHHHHHHHHHHEEEEECCCCHHHHCCCHHCCCCCCEEEEEECCCCCCHHHH
MLLSTMAAEATARATLRSVLAARSLTTAEGLHLPCAADVAGTAPWGAGWP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SNRPISPGSITQVAGIEVGHFTSPLRPTGCTVVIAREGAVAGVDVRGAAPGTRETDLLE
CCCCCCCCCCEEEECEEECCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCCCCCCC
PTHLVDRIHAVMLAGGSAFGLDAAAGAVRWLEERGIGFDVGVARVPLVPAAVLFDLHVGD
HHHHHHHHHHHHEECCCCCCCHHHHHHHHHHHHCCCCEECCHHHCCCCCEEEEEEEECCC
ARIRPDVAAGYAACEAAAAAASSGAAAMPLAEGCVGAGAGAAVGKLFGMAHAMKGGIGSA
CCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCC
SVTVDGVTVGALVACNAVGDVVDPETGRPVAGARTADGLHLRDTRRALLAGDAPRTLLAG
EEEECCEEEHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEHHHHHHHHCCCCCCEEEEC
TNTTIGVVATDAVITKAQARRLAVCAHDGLARAINPVHTLSDGDTLFALGTGRAGKPLGM
CCCEEEEEECHHHHHHHHHHEEEEECCCCHHHHCCCHHCCCCCCEEEEEECCCCCCHHHH
MLLSTMAAEATARATLRSVLAARSLTTAEGLHLPCAADVAGTAPWGAGWP
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11234002 [H]