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The map label for this gene is ygeA [C]

Identifier: 120610346

GI number: 120610346

Start: 1824445

End: 1825209

Strand: Direct

Name: ygeA [C]

Synonym: Aave_1663

Alternate gene names: 120610346

Gene position: 1824445-1825209 (Clockwise)

Preceding gene: 120610345

Following gene: 120610347

Centisome position: 34.08

GC content: 73.86

Gene sequence:

>765_bases
ATGACTGCAACTGCAAACCCGTCCGCGGCCGTCGTGTCCGCGATGACCGTCGGCATCGTGGCCGGCATGGGCCCTGCCGC
GGGCGTGGATTTCGCGCGGCTGTTCGTGCGTGCGTCGGAACAATGGCTGCGCGACCATGGCCAGGCCGTGCGCGATCAGG
CGTTCCCCGAGCACTGGATCGCCCAGGTGCCGGTGGCGGACCGCACGCAGGCACTGCGCGATCCGGCGGCGCCACAGCCG
CTCGAGGGGCTGGTGTCGGCGCTGGAGCGCCTGGCGGCGGTGGGCGCGCGTGCCGCGGCCATGTCGTGCAACACGGCGCA
TGCCTGGCACGCGGCGCTGCAGGAGCGCGTGCCCGGCGTGGAACTGCTGCACATCGCGCGGGAGACCGCCGCGGAACTGC
AGCGCCGCGGGATCCGCCGCGCGGCGCTGCTGGCCACGCAGGGCACCTACGGCATGGGCCTGTACGACGAAGCCTTCGCC
ACGCACGGCGTGGAATGCGTGCTGCCCTCTGCCAAGGCGAAGGAGTTGCTGATGGCGGGCATCTACGATGGCGTGAAGGC
CGGCGACATGGCCCTGGCGCGCCGCCGGTTCGCCGAGGCGGGGCAGGCGGTGCGCGCGCAGCACGGCGACGTTCCGCTCG
TCATGGCCTGCACGGAGATCCCGCTGGCGCTGCCCGATGCGCCCGAGGCCGCCGGCTGGACGCTGGTGGATCCGTCCGAG
ATCCTCGCGGCCGCGCTGGTGCGCCGCGCGTACGGCGGCCGCTGA

Upstream 100 bases:

>100_bases
GCGTCTGCTGGCTTGGCCTGCTCCGCGGCCTTCTGAAGGGTGAGGCCGTGTCGTTGTCAAAATCTGCGCACAATCCCGTC
GATCACCGGACTGAAGAAAA

Downstream 100 bases:

>100_bases
CAAGGCCCGGGCGGGCGGGGGCCTTCGCAGCCCTCCGGCCGGCGCGGCCGTGCGCGCCGGCCACAATACGCCCATGTCCG
ACGTGCACTCCGATGAACTG

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 253

Protein sequence:

>254_residues
MTATANPSAAVVSAMTVGIVAGMGPAAGVDFARLFVRASEQWLRDHGQAVRDQAFPEHWIAQVPVADRTQALRDPAAPQP
LEGLVSALERLAAVGARAAAMSCNTAHAWHAALQERVPGVELLHIARETAAELQRRGIRRAALLATQGTYGMGLYDEAFA
THGVECVLPSAKAKELLMAGIYDGVKAGDMALARRRFAEAGQAVRAQHGDVPLVMACTEIPLALPDAPEAAGWTLVDPSE
ILAAALVRRAYGGR

Sequences:

>Translated_254_residues
MTATANPSAAVVSAMTVGIVAGMGPAAGVDFARLFVRASEQWLRDHGQAVRDQAFPEHWIAQVPVADRTQALRDPAAPQP
LEGLVSALERLAAVGARAAAMSCNTAHAWHAALQERVPGVELLHIARETAAELQRRGIRRAALLATQGTYGMGLYDEAFA
THGVECVLPSAKAKELLMAGIYDGVKAGDMALARRRFAEAGQAVRAQHGDVPLVMACTEIPLALPDAPEAAGWTLVDPSE
ILAAALVRRAYGGR
>Mature_253_residues
TATANPSAAVVSAMTVGIVAGMGPAAGVDFARLFVRASEQWLRDHGQAVRDQAFPEHWIAQVPVADRTQALRDPAAPQPL
EGLVSALERLAAVGARAAAMSCNTAHAWHAALQERVPGVELLHIARETAAELQRRGIRRAALLATQGTYGMGLYDEAFAT
HGVECVLPSAKAKELLMAGIYDGVKAGDMALARRRFAEAGQAVRAQHGDVPLVMACTEIPLALPDAPEAAGWTLVDPSEI
LAAALVRRAYGGR

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.13 [H]

Molecular weight: Translated: 26754; Mature: 26623

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: PS00923 ASP_GLU_RACEMASE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATANPSAAVVSAMTVGIVAGMGPAAGVDFARLFVRASEQWLRDHGQAVRDQAFPEHWI
CCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AQVPVADRTQALRDPAAPQPLEGLVSALERLAAVGARAAAMSCNTAHAWHAALQERVPGV
HCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
ELLHIARETAAELQRRGIRRAALLATQGTYGMGLYDEAFATHGVECVLPSAKAKELLMAG
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHH
IYDGVKAGDMALARRRFAEAGQAVRAQHGDVPLVMACTEIPLALPDAPEAAGWTLVDPSE
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEECHHH
ILAAALVRRAYGGR
HHHHHHHHHHHCCC
>Mature Secondary Structure 
TATANPSAAVVSAMTVGIVAGMGPAAGVDFARLFVRASEQWLRDHGQAVRDQAFPEHWI
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
AQVPVADRTQALRDPAAPQPLEGLVSALERLAAVGARAAAMSCNTAHAWHAALQERVPGV
HCCCCHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCH
ELLHIARETAAELQRRGIRRAALLATQGTYGMGLYDEAFATHGVECVLPSAKAKELLMAG
HHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCHHHHHHHCCCEEECCCHHHHHHHHHH
IYDGVKAGDMALARRRFAEAGQAVRAQHGDVPLVMACTEIPLALPDAPEAAGWTLVDPSE
HHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCEEECHHH
ILAAALVRRAYGGR
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2054383; 1907199 [H]