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The map label for this gene is ymfO [C]

Identifier: 120610300

GI number: 120610300

Start: 1779493

End: 1780773

Strand: Direct

Name: ymfO [C]

Synonym: Aave_1617

Alternate gene names: 120610300

Gene position: 1779493-1780773 (Clockwise)

Preceding gene: 120610299

Following gene: 120610301

Centisome position: 33.24

GC content: 63.78

Gene sequence:

>1281_bases
ATGTTTTTCTCTGAGCTTCTGGGAAACGGCCAGGCGGGCAACGTGTCCGACGGCGGCGGCAGCTTCTGGCGTGGGCTTCT
GGGTGGGCGCGGTAGCGCGGCTGGTGTACGCGTCACGCCCGAAAGCGCGCTCGCGCTGCCAATCCTGCAGAACTGCGTGA
CGCTGCTCGCCGAGAGCTGCGCACAGTTGTCGTGCGAGGTCTTCGAGCGCCTGGACGGCGGGCAGCGCCAGGCGGCCGTG
AACCACCCGGCCTACGATGTGCTGCGCTACCGGCCCAACGCGTTCCAGACTCCGTACGAGCGGACAGAGTTGCTGCAGAT
GAGTGCAGGCCTGCGCGGCAATGGGTACGAATTCATCGAGCGGCGGGAAGACGGCAACATCGTGGCGCTCTGGCCGCTGG
ACCCTGGAAAGGTCAGCGTGCTCAAGGGGCCCGACATGCTCCCGTACTACCAGGTGCAAGGCGCGCCGGAACCGCTGCCT
ATGCGCCTGGTGCACCATGTGCGCTGGACCAGCCACACCGGCTACATGGGTCTCTCGCCCGTGGCTCTCCACGCCGACGC
GCTGGGAATCTCCATGGCCCTGCAGCAGTACGCGGGCAAGAGCTTCGCCAACGGCGCCACCCTGTCGGGTGTGATCGAAC
GACCGAAGGAGGTCTCGGCCATAAAGGACCAGAGCGCGATAGATAAGGTTCTTGAGGCCTGGGCTGCTCGGCACAGTGGG
CCGGACAACGCCAAGAAGGTGGCGCTGTTGCAGGAGGGCATGACGTTCAAGCCTGTGTCCATGACGAACGTGGACGCGGA
GATCATCTCCATGCTCAAGCTCACGGGCGCGGACGTGGCCCGGATCTACAAAATCCCCCTCCCCATGGTCAACGACCTGG
AGGGCGCGAACTACAACACCGTTGAGCAGCTTCTGATCATGTTCTCTGTGTTCGCGTTGCTGCCATGGGTCAAGCGGCAT
GAGCAGAGCTCGATGCGCGATTTCCTGCTGGAGAAGGACCGCAAGCGCTACTTCATCGAGTTCAACCTGTCGAGCCTGCT
GCGCGGGGACCAGAAGACTCGCTACGAGGCCTATGCCATCGCCCGGCAATGGGGGTGGCTGTCGGTCAACGACATCCGGC
GGTTGGAGAACATGCCACCCGTGCAAGGCGGGGAGATCTATCTGCAGCCGCTCAACATGATCGACCCGACCAAGGGCGTT
CTTCCCTCGGCCCTCACGCCCCATGCGCGCGCCGAGCTCGAGGCGCAGATGGAATACATCGGAAAGGTGTTGCAAGCATG
A

Upstream 100 bases:

>100_bases
TCCGGCCGCCTGCATCGTGGCCGGTCTCGCATTGCTGGCATATGCCCGATTGCTGGACCGCGCAGCTGCCGCGCTGGCGG
CGAAGAAAGGCGGGTGATGG

Downstream 100 bases:

>100_bases
AAAGCTATCTCCGTGCCTCCGGCCTACTGTTCAACCAGCCGCTGATGGTCACTCCCGACGTGCTGGAGCTCGGCGTACGC
TGGGCCAACCAGGTGATGAA

Product: HK97 family phage portal protein

Products: NA

Alternate protein names: HK97 Family Phage Portal Protein; Portal Protein; Phage Portal Protein HK; Head Portal Protein; HK97 Family Portal Protein; Phage-Related Head Portal Protein; Phage-Related Protein; Phage-Related Portal Protein; Bacteriophage Portal Protein; HK97 Family Portal Protein ; Phage Capsid Protein HK; Portal V; Phage Related Head Portal Protein; Phage Portal; Prophage; Phage-Like Protein

Number of amino acids: Translated: 426; Mature: 426

Protein sequence:

>426_residues
MFFSELLGNGQAGNVSDGGGSFWRGLLGGRGSAAGVRVTPESALALPILQNCVTLLAESCAQLSCEVFERLDGGQRQAAV
NHPAYDVLRYRPNAFQTPYERTELLQMSAGLRGNGYEFIERREDGNIVALWPLDPGKVSVLKGPDMLPYYQVQGAPEPLP
MRLVHHVRWTSHTGYMGLSPVALHADALGISMALQQYAGKSFANGATLSGVIERPKEVSAIKDQSAIDKVLEAWAARHSG
PDNAKKVALLQEGMTFKPVSMTNVDAEIISMLKLTGADVARIYKIPLPMVNDLEGANYNTVEQLLIMFSVFALLPWVKRH
EQSSMRDFLLEKDRKRYFIEFNLSSLLRGDQKTRYEAYAIARQWGWLSVNDIRRLENMPPVQGGEIYLQPLNMIDPTKGV
LPSALTPHARAELEAQMEYIGKVLQA

Sequences:

>Translated_426_residues
MFFSELLGNGQAGNVSDGGGSFWRGLLGGRGSAAGVRVTPESALALPILQNCVTLLAESCAQLSCEVFERLDGGQRQAAV
NHPAYDVLRYRPNAFQTPYERTELLQMSAGLRGNGYEFIERREDGNIVALWPLDPGKVSVLKGPDMLPYYQVQGAPEPLP
MRLVHHVRWTSHTGYMGLSPVALHADALGISMALQQYAGKSFANGATLSGVIERPKEVSAIKDQSAIDKVLEAWAARHSG
PDNAKKVALLQEGMTFKPVSMTNVDAEIISMLKLTGADVARIYKIPLPMVNDLEGANYNTVEQLLIMFSVFALLPWVKRH
EQSSMRDFLLEKDRKRYFIEFNLSSLLRGDQKTRYEAYAIARQWGWLSVNDIRRLENMPPVQGGEIYLQPLNMIDPTKGV
LPSALTPHARAELEAQMEYIGKVLQA
>Mature_426_residues
MFFSELLGNGQAGNVSDGGGSFWRGLLGGRGSAAGVRVTPESALALPILQNCVTLLAESCAQLSCEVFERLDGGQRQAAV
NHPAYDVLRYRPNAFQTPYERTELLQMSAGLRGNGYEFIERREDGNIVALWPLDPGKVSVLKGPDMLPYYQVQGAPEPLP
MRLVHHVRWTSHTGYMGLSPVALHADALGISMALQQYAGKSFANGATLSGVIERPKEVSAIKDQSAIDKVLEAWAARHSG
PDNAKKVALLQEGMTFKPVSMTNVDAEIISMLKLTGADVARIYKIPLPMVNDLEGANYNTVEQLLIMFSVFALLPWVKRH
EQSSMRDFLLEKDRKRYFIEFNLSSLLRGDQKTRYEAYAIARQWGWLSVNDIRRLENMPPVQGGEIYLQPLNMIDPTKGV
LPSALTPHARAELEAQMEYIGKVLQA

Specific function: Unknown

COG id: COG4695

COG function: function code S; Phage-related protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47131; Mature: 47131

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFFSELLGNGQAGNVSDGGGSFWRGLLGGRGSAAGVRVTPESALALPILQNCVTLLAESC
CCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
AQLSCEVFERLDGGQRQAAVNHPAYDVLRYRPNAFQTPYERTELLQMSAGLRGNGYEFIE
HHHHHHHHHHCCCCCCHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
RREDGNIVALWPLDPGKVSVLKGPDMLPYYQVQGAPEPLPMRLVHHVRWTSHTGYMGLSP
CCCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCH
VALHADALGISMALQQYAGKSFANGATLSGVIERPKEVSAIKDQSAIDKVLEAWAARHSG
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDNAKKVALLQEGMTFKPVSMTNVDAEIISMLKLTGADVARIYKIPLPMVNDLEGANYNT
CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCHH
VEQLLIMFSVFALLPWVKRHEQSSMRDFLLEKDRKRYFIEFNLSSLLRGDQKTRYEAYAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCHHHHHHHHH
ARQWGWLSVNDIRRLENMPPVQGGEIYLQPLNMIDPTKGVLPSALTPHARAELEAQMEYI
HHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GKVLQA
HHHHCC
>Mature Secondary Structure
MFFSELLGNGQAGNVSDGGGSFWRGLLGGRGSAAGVRVTPESALALPILQNCVTLLAESC
CCHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCEEECCCHHHHHHHHHHHHHHHHHHH
AQLSCEVFERLDGGQRQAAVNHPAYDVLRYRPNAFQTPYERTELLQMSAGLRGNGYEFIE
HHHHHHHHHHCCCCCCHHCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHH
RREDGNIVALWPLDPGKVSVLKGPDMLPYYQVQGAPEPLPMRLVHHVRWTSHTGYMGLSP
CCCCCCEEEEECCCCCCEEEECCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCH
VALHADALGISMALQQYAGKSFANGATLSGVIERPKEVSAIKDQSAIDKVLEAWAARHSG
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCC
PDNAKKVALLQEGMTFKPVSMTNVDAEIISMLKLTGADVARIYKIPLPMVNDLEGANYNT
CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHEEECCCCCCCCCCCCCCHH
VEQLLIMFSVFALLPWVKRHEQSSMRDFLLEKDRKRYFIEFNLSSLLRGDQKTRYEAYAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEHHHHHCCCCHHHHHHHHH
ARQWGWLSVNDIRRLENMPPVQGGEIYLQPLNMIDPTKGVLPSALTPHARAELEAQMEYI
HHHCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
GKVLQA
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA