Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120610262

Identifier: 120610262

GI number: 120610262

Start: 1739968

End: 1740990

Strand: Direct

Name: 120610262

Synonym: Aave_1577

Alternate gene names: NA

Gene position: 1739968-1740990 (Clockwise)

Preceding gene: 120610259

Following gene: 120610263

Centisome position: 32.51

GC content: 71.75

Gene sequence:

>1023_bases
ATGAGCGCATGCACCCGCCAGGCACCGGCCCGAGCCTTGCCGGCGATCGGCCCGCTGCAGGCCTTCAGCGCCGGCCTGCT
GCGGCTGTCCGAGCGTGCGCGCCAGGGTGCCCCGCAGGCCATGCTGCGCGACGCACTCGACATCCTGCGCACGCTGGTGC
CCTTCGACATGGCGTGGTGGGGCGAGGTGTCGGCCGGCACGCCCCAGGTGGCTCCGCGCAACTGGCTGCACGGCAGCATC
GGCCTCAGCCGGCAGTTCGCCCAGGAGTGGAACCAGCTGTCCATGGAGGACGAATTCGCGCAGGCATCGCTGGACAGCCT
CGGGCAGGTGGTCGTGGGCAATGCCTGCAGCGGGCAGCCGCTGTCCGCTTCGCCGCGGGTGGAGGCCTTCTGCGAGCGCC
ACGGTCTGTTCCACAGCATGGCCTTCACCGTGGCGCTGCCGGACAGCGGCCTGCAGTTTTTCGTCTGCGTGTACCGCAAG
CCCCTGGCCCCGCCGTTCTCCGGGCAGGATGCGGCGCTGTTCGGTGAGTTCGTCCCGCACCTGCTGGACCACTGGCGGCA
CATGCTCGAAACCCTGCAGAGCGTCTCCATCGCACGGGCCTGGGACAGCTACGCGCTGGCCGACATGGAGGGCCGGCTGC
TCTTCCTGGGATTGCGCGTGGGCCAGGCGCTGGCGCAGGTCCATCCCGGATGGTCCGGCACGGCCCTGCCCCCCGAGTGC
CATGCGGCCCTGCGGCAACTGCCCGCAAGCCTGGTGGTCGGCAGGTCGTGCCGCCTGCACCTGGAGGCCTGCGGGGCGCT
GGTGTGCCTGCGCCTGCCGTCGCGGCAACGCAAATCGCCGCTCGCCCCGCGCGAGATGAGCGCCGCCATGCTGTACGCGC
ATGGCCATGGCTACAAGGCCATCGCCGGCCTGCTGGGCCTCTCGCCCGCCACCGTGCGGACCTACCTGCGCAGCGCCTAT
GCCGTGCTGGGCGTGCGCAACAAGGTGGAGCTGGCGGCCGCGCTGCGCGGCACGCGCCATTGA

Upstream 100 bases:

>100_bases
CGAAGAGCCAGCGCCCGGACCGGATCCGGGGACCACAGATCCACCAGGAGACAGGCCCATGCATTTGCAGGCAGGGGAGG
CCGCGCAGGGCGGCCCCGCC

Downstream 100 bases:

>100_bases
ACGCGGGCTCGGGATTTTCCCCATCCGTCTGCATTTGCAGGGGTGTCCGCACGGGCATGGCGTCCTATCGTGCCGGCAGG
CCGCGTGGCGGCCGAGACAA

Product: LuxR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator LuxR Family; GerE Family Transcriptional Regulator; LuxR Superfamily Regulatory Protein; Transcriptional Regulator; Regulatory Protein LuxR

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWWGEVSAGTPQVAPRNWLHGSI
GLSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQPLSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRK
PLAPPFSGQDAALFGEFVPHLLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPEC
HAALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKAIAGLLGLSPATVRTYLRSAY
AVLGVRNKVELAAALRGTRH

Sequences:

>Translated_340_residues
MSACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWWGEVSAGTPQVAPRNWLHGSI
GLSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQPLSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRK
PLAPPFSGQDAALFGEFVPHLLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPEC
HAALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKAIAGLLGLSPATVRTYLRSAY
AVLGVRNKVELAAALRGTRH
>Mature_339_residues
SACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWWGEVSAGTPQVAPRNWLHGSIG
LSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQPLSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRKP
LAPPFSGQDAALFGEFVPHLLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPECH
AALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKAIAGLLGLSPATVRTYLRSAYA
VLGVRNKVELAAALRGTRH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36886; Mature: 36755

Theoretical pI: Translated: 9.15; Mature: 9.15

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWW
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHC
GEVSAGTPQVAPRNWLHGSIGLSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCC
LSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRKPLAPPFSGQDAALFGEFVPH
CCCCCHHHHHHHHHCHHHHHEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPEC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHH
HAALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKA
HHHHHHCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHEEEECCCCHHH
IAGLLGLSPATVRTYLRSAYAVLGVRNKVELAAALRGTRH
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC
>Mature Secondary Structure 
SACTRQAPARALPAIGPLQAFSAGLLRLSERARQGAPQAMLRDALDILRTLVPFDMAWW
CCCCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCHHHC
GEVSAGTPQVAPRNWLHGSIGLSRQFAQEWNQLSMEDEFAQASLDSLGQVVVGNACSGQP
CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCEEECCCCCCCC
LSASPRVEAFCERHGLFHSMAFTVALPDSGLQFFVCVYRKPLAPPFSGQDAALFGEFVPH
CCCCCHHHHHHHHHCHHHHHEEEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHH
LLDHWRHMLETLQSVSIARAWDSYALADMEGRLLFLGLRVGQALAQVHPGWSGTALPPEC
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHCCCCCCCCCCHHH
HAALRQLPASLVVGRSCRLHLEACGALVCLRLPSRQRKSPLAPREMSAAMLYAHGHGYKA
HHHHHHCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHCCCCCCCHHHHHHEEEECCCCHHH
IAGLLGLSPATVRTYLRSAYAVLGVRNKVELAAALRGTRH
HHHHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA