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The map label for this gene is rpfG [H]

Identifier: 120609292

GI number: 120609292

Start: 647612

End: 648907

Strand: Reverse

Name: rpfG [H]

Synonym: Aave_0592

Alternate gene names: 120609292

Gene position: 648907-647612 (Counterclockwise)

Preceding gene: 120609297

Following gene: 120609291

Centisome position: 12.12

GC content: 69.14

Gene sequence:

>1296_bases
ATGCTCAAGCGAATCAGCGTACAGCACCTCACCCTGGGCATGTACCTGCACCAGTTCTGCGGGTCCTGGATGGACCATCC
ATTCTGGCGCACGGGTTTCGTGCTTCAGGATGCGGCGGATCTCGCGCGCATCCACGCGACGGCCATCCAGGAGGTCTGGA
TCGACGTGTCCAAGGGGCGCGACGTCGCCGCCGGGGTGGAGGCCGTCACGCCCGAGCAGGCCGAGGCCCGGAGGGAGACG
GATTTCCAGAAGCTTCAGGACATGCCGGAGCTCAAGGTCGCGCCGTCCCCGCCTCCCCCGGCAGCTCCTCCCATCCAGGC
GCGCCCACGGGGAACGCGGCCGGCCAGCATGTCCGAGGAACTGGCCCATGCGGCCGCCCTGACCAGCCACGCCCGCCAGA
CGATGACCTCGATGTTCACCGAGGCACGCATGGGCCGGGTGGTGGACTCGACCGAGGCCCGCAGCCTCGTCGAGGAAATC
TCGGACTCGGTGACGCGCAATCCGTCGGCCCTCATCAGTCTCGCGCGCCTGAAGACCGCGGACGACTACACCTACATGCA
TTCGGTGGCCGTGTGCGCGCTCATGGTGGCCCTGGGCCGCCAGATCGGCCTGGAGGGAGAGCGCCTGCGCACCGCCGGCA
TGGCCGGCCTCATGCACGACATCGGCAAGGCGCGCATCCCGCTGTCGGTGCTGAACAAGCCCGGCAAGCTCACCGACGAC
GAGTTCGACGTGATCCGCAGCCACTCCGAGCACGGCCACAGGATGCTCCTGGCCTGCGGCGGCGTGGACGAGGAGGTGCT
GGACGCCTGCCTGCACCACCACGAGAAGATGGACGGCAGCGGCTACCCGCACCGGCTCGCGGGCGAGGGCATCGGCCTGA
TCGCGCGCATGACGGCGATCTGCGATGTGTACGACGCCATCACGTCCGACCGGCCCTACAAGCGCGGCTGGGACCCGGCC
GAGTCGCTGCGCCGCATGGCCGAGTGGACGCACGGGCATTTCGACGCACGGCTGTTCCAGGCTTTCGTCAAGAGCATCGG
CATCTATCCCGTCGGCTCGCTGGTGCGGCTCGCCTCGGGCCGCATCGGGGTGGTGATGGAGCAGTCCGCCTCGCTGGTCT
CGCCGCGCGTGAAGGTGTTCTTCTCCACCAAGTCCGACCTGCGCATACCGCCCGAGGTGGTCGATCTCTCGGCGGCCGGG
AGCGGCGACAAGATCGTCGCGCGCGAGGATCCGGACACCTGGCGCTTCCCGGACCTCGTCGATCTCTGGGCGCGGCCCGG
GGGCACGGCCGGATGA

Upstream 100 bases:

>100_bases
AAATGGAAACGGCTTGCCGCACGCTCCACGGGCGCGCGCAAAAGGCTAACATGCTCTCGCAGCCGGCCGATCTTCCTGTC
CCAGCCCCTTTTTCCGCCCC

Downstream 100 bases:

>100_bases
GCCGGGCGCGCCCGGAACGCGCGTGCCCGGCCGTGCGCACGTATGCGATGGCGGAGCGCTCCCGGCACCTGGACTTCGAC
ATACGCGACCAGAGCGGCCG

Product: metal dependent phosphohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MLKRISVQHLTLGMYLHQFCGSWMDHPFWRTGFVLQDAADLARIHATAIQEVWIDVSKGRDVAAGVEAVTPEQAEARRET
DFQKLQDMPELKVAPSPPPPAAPPIQARPRGTRPASMSEELAHAAALTSHARQTMTSMFTEARMGRVVDSTEARSLVEEI
SDSVTRNPSALISLARLKTADDYTYMHSVAVCALMVALGRQIGLEGERLRTAGMAGLMHDIGKARIPLSVLNKPGKLTDD
EFDVIRSHSEHGHRMLLACGGVDEEVLDACLHHHEKMDGSGYPHRLAGEGIGLIARMTAICDVYDAITSDRPYKRGWDPA
ESLRRMAEWTHGHFDARLFQAFVKSIGIYPVGSLVRLASGRIGVVMEQSASLVSPRVKVFFSTKSDLRIPPEVVDLSAAG
SGDKIVAREDPDTWRFPDLVDLWARPGGTAG

Sequences:

>Translated_431_residues
MLKRISVQHLTLGMYLHQFCGSWMDHPFWRTGFVLQDAADLARIHATAIQEVWIDVSKGRDVAAGVEAVTPEQAEARRET
DFQKLQDMPELKVAPSPPPPAAPPIQARPRGTRPASMSEELAHAAALTSHARQTMTSMFTEARMGRVVDSTEARSLVEEI
SDSVTRNPSALISLARLKTADDYTYMHSVAVCALMVALGRQIGLEGERLRTAGMAGLMHDIGKARIPLSVLNKPGKLTDD
EFDVIRSHSEHGHRMLLACGGVDEEVLDACLHHHEKMDGSGYPHRLAGEGIGLIARMTAICDVYDAITSDRPYKRGWDPA
ESLRRMAEWTHGHFDARLFQAFVKSIGIYPVGSLVRLASGRIGVVMEQSASLVSPRVKVFFSTKSDLRIPPEVVDLSAAG
SGDKIVAREDPDTWRFPDLVDLWARPGGTAG
>Mature_431_residues
MLKRISVQHLTLGMYLHQFCGSWMDHPFWRTGFVLQDAADLARIHATAIQEVWIDVSKGRDVAAGVEAVTPEQAEARRET
DFQKLQDMPELKVAPSPPPPAAPPIQARPRGTRPASMSEELAHAAALTSHARQTMTSMFTEARMGRVVDSTEARSLVEEI
SDSVTRNPSALISLARLKTADDYTYMHSVAVCALMVALGRQIGLEGERLRTAGMAGLMHDIGKARIPLSVLNKPGKLTDD
EFDVIRSHSEHGHRMLLACGGVDEEVLDACLHHHEKMDGSGYPHRLAGEGIGLIARMTAICDVYDAITSDRPYKRGWDPA
ESLRRMAEWTHGHFDARLFQAFVKSIGIYPVGSLVRLASGRIGVVMEQSASLVSPRVKVFFSTKSDLRIPPEVVDLSAAG
SGDKIVAREDPDTWRFPDLVDLWARPGGTAG

Specific function: Positively regulates the synthesis of extracellular enzymes and extracellular polysaccharides. The cell-cell signaling system encoded by rpf genes is required for full virulence and is implicated in regulation of the formation and dispersal of biofilms [H

COG id: COG2206

COG function: function code T; HD-GYP domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR003607
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 47284; Mature: 47284

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKRISVQHLTLGMYLHQFCGSWMDHPFWRTGFVLQDAADLARIHATAIQEVWIDVSKGR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVAAGVEAVTPEQAEARRETDFQKLQDMPELKVAPSPPPPAAPPIQARPRGTRPASMSEE
CHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LAHAAALTSHARQTMTSMFTEARMGRVVDSTEARSLVEEISDSVTRNPSALISLARLKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
DDYTYMHSVAVCALMVALGRQIGLEGERLRTAGMAGLMHDIGKARIPLSVLNKPGKLTDD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCH
EFDVIRSHSEHGHRMLLACGGVDEEVLDACLHHHEKMDGSGYPHRLAGEGIGLIARMTAI
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHH
CDVYDAITSDRPYKRGWDPAESLRRMAEWTHGHFDARLFQAFVKSIGIYPVGSLVRLASG
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
RIGVVMEQSASLVSPRVKVFFSTKSDLRIPPEVVDLSAAGSGDKIVAREDPDTWRFPDLV
CEEEEECCCHHHHCCCEEEEEECCCCCCCCHHHEEEECCCCCCEEEECCCCCCCCCCHHH
DLWARPGGTAG
HHHCCCCCCCC
>Mature Secondary Structure
MLKRISVQHLTLGMYLHQFCGSWMDHPFWRTGFVLQDAADLARIHATAIQEVWIDVSKGR
CCCCCCHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DVAAGVEAVTPEQAEARRETDFQKLQDMPELKVAPSPPPPAAPPIQARPRGTRPASMSEE
CHHHCCHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHH
LAHAAALTSHARQTMTSMFTEARMGRVVDSTEARSLVEEISDSVTRNPSALISLARLKTA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC
DDYTYMHSVAVCALMVALGRQIGLEGERLRTAGMAGLMHDIGKARIPLSVLNKPGKLTDD
CCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCCH
EFDVIRSHSEHGHRMLLACGGVDEEVLDACLHHHEKMDGSGYPHRLAGEGIGLIARMTAI
HHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCCCHHCCCCHHHHHHHHHH
CDVYDAITSDRPYKRGWDPAESLRRMAEWTHGHFDARLFQAFVKSIGIYPVGSLVRLASG
HHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCHHHHHHHHCC
RIGVVMEQSASLVSPRVKVFFSTKSDLRIPPEVVDLSAAGSGDKIVAREDPDTWRFPDLV
CEEEEECCCHHHHCCCEEEEEECCCCCCCCHHHEEEECCCCCCEEEECCCCCCCCCCHHH
DLWARPGGTAG
HHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11123673 [H]