| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609297
Identifier: 120609297
GI number: 120609297
Start: 654015
End: 654851
Strand: Reverse
Name: 120609297
Synonym: Aave_0597
Alternate gene names: NA
Gene position: 654851-654015 (Counterclockwise)
Preceding gene: 120609298
Following gene: 120609292
Centisome position: 12.23
GC content: 74.19
Gene sequence:
>837_bases ATGAACCCTCCCGGCTCTCCCGGTGCATCCCGTGCCGTGCTGCTCTGCGCGGACGACTATGCGCTGCACCCCCTCGTGGA CGAGGCCGTGGAGCAGCTCGCGCGGGCCGGCCGCCTGTCGGCCACCAGCTGCATGACGGCCTCGCCGCGCTGGCAGGCCG CGGCGGCATGCCTCGCGCCGCTGCGTCCGCAGCTGGCGGTGGGCCTGCACTTCGACCTGACCGAAAGCCATGGCGGTGCG CATGCCGGCGCCCGGGCGCTGGGGCCACTGTTGCTGCAGGCCTATGCGCGGCAGATCCCCGTCGCGGTGCTGCGCGCCGC ATGGCGCACCCAACTGGACGCGTTCGAGCGGGCGATGCGCACGCCACCGGACTTCATCGACGGCCACCAGCACGTGCACC AGCTGCCCCGCGCGCGCGATGCCTTGCTGGCCGAGTTGCAGGCCCGCTATGCGGCCCACGAACGCCCCTGGGTGCGCTCC ACCGCGCCCGCGCCGGGGCTGTGGCGCGATCCGAAGGCATCCATCATCGCCCTGCTCGGCGGCTGGACGGCCACGCGGCG CTGGCGCCGGGCGGGACTGGCGACGAACCCGGGTTTCGGCGGGGTCTACGGCTTCGATGCGCCCGATGCCCAGGCCTACG GGGCGCGCATGGCGACGTGGCTGCCGCGCCTGCCGGAGGGCGGGCTGCTGATGTGCCATCCGGCCACGGACGTGGTGCAT GGCGATGCCATCGGCACGCAGCGGCCGGTGGAGTTCGCCTACCTGATGTCCGAGGCCTTCGGCGAGCTGCTGCGGCGCAG CGGCCGGCATGTGCAGCAGGGGCCGTTCGCGCCGTAG
Upstream 100 bases:
>100_bases ACTACTTCTGGAGCCAGGCCGGCGTACTGGTACTGGTGGCCCTGGGCACCTTCGTGCTGAGCAAGTTCTGGGCATTCAAG GCGCCCTCCGGAAGCGGCGC
Downstream 100 bases:
>100_bases CAGCCCGCCGGGCCGGCGGGCGCGAAGGACGCGCGCCGGCGGCGGATCAGCGCAGCGCGAACCCCGCCACGATGCCCGCG AACAGCGTGAAGCCCAGCCA
Product: hypothetical protein
Products: NA
Alternate protein names: YdjC-Like Protein; Cellobiose Phosphorylase; Exported Protein
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MNPPGSPGASRAVLLCADDYALHPLVDEAVEQLARAGRLSATSCMTASPRWQAAAACLAPLRPQLAVGLHFDLTESHGGA HAGARALGPLLLQAYARQIPVAVLRAAWRTQLDAFERAMRTPPDFIDGHQHVHQLPRARDALLAELQARYAAHERPWVRS TAPAPGLWRDPKASIIALLGGWTATRRWRRAGLATNPGFGGVYGFDAPDAQAYGARMATWLPRLPEGGLLMCHPATDVVH GDAIGTQRPVEFAYLMSEAFGELLRRSGRHVQQGPFAP
Sequences:
>Translated_278_residues MNPPGSPGASRAVLLCADDYALHPLVDEAVEQLARAGRLSATSCMTASPRWQAAAACLAPLRPQLAVGLHFDLTESHGGA HAGARALGPLLLQAYARQIPVAVLRAAWRTQLDAFERAMRTPPDFIDGHQHVHQLPRARDALLAELQARYAAHERPWVRS TAPAPGLWRDPKASIIALLGGWTATRRWRRAGLATNPGFGGVYGFDAPDAQAYGARMATWLPRLPEGGLLMCHPATDVVH GDAIGTQRPVEFAYLMSEAFGELLRRSGRHVQQGPFAP >Mature_278_residues MNPPGSPGASRAVLLCADDYALHPLVDEAVEQLARAGRLSATSCMTASPRWQAAAACLAPLRPQLAVGLHFDLTESHGGA HAGARALGPLLLQAYARQIPVAVLRAAWRTQLDAFERAMRTPPDFIDGHQHVHQLPRARDALLAELQARYAAHERPWVRS TAPAPGLWRDPKASIIALLGGWTATRRWRRAGLATNPGFGGVYGFDAPDAQAYGARMATWLPRLPEGGLLMCHPATDVVH GDAIGTQRPVEFAYLMSEAFGELLRRSGRHVQQGPFAP
Specific function: Unknown
COG id: COG3394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30013; Mature: 30013
Theoretical pI: Translated: 9.26; Mature: 9.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPPGSPGASRAVLLCADDYALHPLVDEAVEQLARAGRLSATSCMTASPRWQAAAACLAP CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHC LRPQLAVGLHFDLTESHGGAHAGARALGPLLLQAYARQIPVAVLRAAWRTQLDAFERAMR CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPPDFIDGHQHVHQLPRARDALLAELQARYAAHERPWVRSTAPAPGLWRDPKASIIALLG CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH GWTATRRWRRAGLATNPGFGGVYGFDAPDAQAYGARMATWLPRLPEGGLLMCHPATDVVH CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEE GDAIGTQRPVEFAYLMSEAFGELLRRSGRHVQQGPFAP CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MNPPGSPGASRAVLLCADDYALHPLVDEAVEQLARAGRLSATSCMTASPRWQAAAACLAP CCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCCHHHHHHHHHC LRPQLAVGLHFDLTESHGGAHAGARALGPLLLQAYARQIPVAVLRAAWRTQLDAFERAMR CCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPPDFIDGHQHVHQLPRARDALLAELQARYAAHERPWVRSTAPAPGLWRDPKASIIALLG CCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH GWTATRRWRRAGLATNPGFGGVYGFDAPDAQAYGARMATWLPRLPEGGLLMCHPATDVVH CHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCEE GDAIGTQRPVEFAYLMSEAFGELLRRSGRHVQQGPFAP CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA