Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609149

Identifier: 120609149

GI number: 120609149

Start: 483843

End: 484298

Strand: Reverse

Name: 120609149

Synonym: Aave_0446

Alternate gene names: NA

Gene position: 484298-483843 (Counterclockwise)

Preceding gene: 120609150

Following gene: 120609147

Centisome position: 9.05

GC content: 64.25

Gene sequence:

>456_bases
ATGAGCTTCCAGCAGTACGAACAACTCGTCACCGACCTCTGCGGGGTCATCGACCTGCCCGACCCGCAGGCCGTGCTGGA
CCGGGGCTGGGTGGAGGTGGAGGGCTTCGAGGTCCAGATAGCGCACTACGAGAACGACGTGGCAGCGATGTACCTCAACT
TCCATTTCGGCATCGTCACGGCCGGCCGCACGCTGGCCGTCTACCGGCTCCTGCTGGAAGCCAACCTCACGGTCTATGCG
CAGGACCAGGCGCAGGCCGGGATCAATCCGGACACCGGCGGCATCATCCTCATCGTGCGCGTGCCGATGACGCCCGACAT
CACGGGCACCTGGCTGGCCGAAACGCTCACGCACTATGCAGAGCACGGCCGCTACTGGGGCGACAACATCCTGACCTCCA
CCGACGAGGCCTTTCTGGGAATCTGCTCCGGCGACTACCTGTGGATCAAGGTGTGA

Upstream 100 bases:

>100_bases
TCAACTACAGCCGGCCCCGGACCACGTCCCAGCTCCGGCTGACCACGGAGCGGCTGGCGGGCGGTCCGGCATGGCTTCTG
CCGCGCATGCCCGAACGATC

Downstream 100 bases:

>100_bases
GCCTTTGAAGAGCCTGCAGCCCCAGGGGCTCGCGCCCCGGCGCCGCGGTGCCCCGCAGGGTCTCAACTGCCCAGGGGCGG
CATGGAATGCATGGCGGGAA

Product: TIR chaperone family protein

Products: NA

Alternate protein names: Glutamine Synthetase; HpaB Protein; Type III Secretion Protein HpaB; Tir Chaperone Family Protein

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVTAGRTLAVYRLLLEANLTVYA
QDQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYAEHGRYWGDNILTSTDEAFLGICSGDYLWIKV

Sequences:

>Translated_151_residues
MSFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVTAGRTLAVYRLLLEANLTVYA
QDQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYAEHGRYWGDNILTSTDEAFLGICSGDYLWIKV
>Mature_150_residues
SFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVTAGRTLAVYRLLLEANLTVYAQ
DQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYAEHGRYWGDNILTSTDEAFLGICSGDYLWIKV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16855; Mature: 16724

Theoretical pI: Translated: 4.01; Mature: 4.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVT
CCHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEECEEEEEEEECCCEEEEEEEEEEEEEE
AGRTLAVYRLLLEANLTVYAQDQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYA
CCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
EHGRYWGDNILTSTDEAFLGICSGDYLWIKV
HCCCCCCCCCCCCCCCCEEEEECCCEEEEEC
>Mature Secondary Structure 
SFQQYEQLVTDLCGVIDLPDPQAVLDRGWVEVEGFEVQIAHYENDVAAMYLNFHFGIVT
CHHHHHHHHHHHHCCCCCCCCHHHHHCCCEEEECEEEEEEEECCCEEEEEEEEEEEEEE
AGRTLAVYRLLLEANLTVYAQDQAQAGINPDTGGIILIVRVPMTPDITGTWLAETLTHYA
CCHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHH
EHGRYWGDNILTSTDEAFLGICSGDYLWIKV
HCCCCCCCCCCCCCCCCEEEEECCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA