| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is thiL [H]
Identifier: 120609135
GI number: 120609135
Start: 467341
End: 468321
Strand: Reverse
Name: thiL [H]
Synonym: Aave_0432
Alternate gene names: 120609135
Gene position: 468321-467341 (Counterclockwise)
Preceding gene: 120609137
Following gene: 120609134
Centisome position: 8.75
GC content: 73.5
Gene sequence:
>981_bases ATGGGTGAATTCGATCTGATCGCGCGCTATTTCCGCCGCCCCGTGCGCCGCGCGGCCCTGGGCGTGGGCGACGACTGCGC GCTGCTTGCGCCGGCCGCCGGCATGCAGCTCGCGGTGTCCAGCGACATGCTGGTGGAAGGCCGGCACTTCTTCGCCGATG TCTACCCCGCGCACCTGGGCCACAAGGCCCTGGCGGTGAACCTGTCGGATCTCGCGGCCTGCGGCGCGCGCCCTCTGGCC TTCACGCTGGCGCTGGCGCTGCCCCGCGCCGACGAGGTCTGGCTGCAGGGCTTCTCGGAAGGCCTGCTGGCCCTGGCAGG CGAACATGGCTGCGAACTGGTGGGCGGGGACACCACGCAAGGCCCGCTCAACATCTGCATCACGGTGTTCGGCGAAGTGC CCGCGGGCCAGGCCCTGCTGCGCAGCGGCGCCCGCCCGGGCGACGACCTGTGGGTGAGCGGCCACCTGGGCGATGCGCGG CTGGCACTGGATGCGCTGCTGGGAGAAATGCCCGTGCAGTTGCCGCCGCAGCTGCTGGCGCAGGCGCGCGAACGCCTGGA GCGCCCCACGCCGCGGGTGGCGCTGGGGCAGGCATTGCGCGGCGTGGCCAGCAGCGCCATCGACGTGAGCGACGGGCTCG TGGGCGACCTCGGCCACATCCTGCAGGCCTCGGGCGTGGGCGCGCGCATCAACACGTCGCTCGCCCCGCAGCTCATGGCG GCCTGCGCCGGGCATGCCCCCGGGCAACTGCCCTGCGGCCGGGAAAACCTGCTGCGCTGCGTGCTGGCCGGGGGCGACGA TTACGAACTGCTGTTCACAGCCCCCCCCGGCCGGCGCGCGCAGGTCGAGGCCGCGGCCCGCCAGGGGGGAACGCGCGCCA CCTGCATCGGCGCCATCGAGGCCGAGCCCGGCCTGCGGCTGCTCGACGCGCAGGGCCAGCAAATGGACGCGCAATACCTG GCCTTCGACCACTTCCGCTGA
Upstream 100 bases:
>100_bases AAGCTTCCGCCCCCCGCCGCAGGGGCGCGCGCACGGACAGGAACATCCGGACAGGAAACCGAAGCCCGCGCCGCCCGGCG GCTGCGCGTATGCTCGGCCC
Downstream 100 bases:
>100_bases ACGCGCGCGGCAGAGGCGCTGCTAGCATTGCCCTCCCCCAGTCCTACCCAGAGAGAAGGAGCGCGGATGTCCTCTGCATG CCCGGGCACGGCCCATTCCA
Product: thiamine-monophosphate kinase
Products: NA
Alternate protein names: Thiamine-phosphate kinase [H]
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MGEFDLIARYFRRPVRRAALGVGDDCALLAPAAGMQLAVSSDMLVEGRHFFADVYPAHLGHKALAVNLSDLAACGARPLA FTLALALPRADEVWLQGFSEGLLALAGEHGCELVGGDTTQGPLNICITVFGEVPAGQALLRSGARPGDDLWVSGHLGDAR LALDALLGEMPVQLPPQLLAQARERLERPTPRVALGQALRGVASSAIDVSDGLVGDLGHILQASGVGARINTSLAPQLMA ACAGHAPGQLPCGRENLLRCVLAGGDDYELLFTAPPGRRAQVEAAARQGGTRATCIGAIEAEPGLRLLDAQGQQMDAQYL AFDHFR
Sequences:
>Translated_326_residues MGEFDLIARYFRRPVRRAALGVGDDCALLAPAAGMQLAVSSDMLVEGRHFFADVYPAHLGHKALAVNLSDLAACGARPLA FTLALALPRADEVWLQGFSEGLLALAGEHGCELVGGDTTQGPLNICITVFGEVPAGQALLRSGARPGDDLWVSGHLGDAR LALDALLGEMPVQLPPQLLAQARERLERPTPRVALGQALRGVASSAIDVSDGLVGDLGHILQASGVGARINTSLAPQLMA ACAGHAPGQLPCGRENLLRCVLAGGDDYELLFTAPPGRRAQVEAAARQGGTRATCIGAIEAEPGLRLLDAQGQQMDAQYL AFDHFR >Mature_325_residues GEFDLIARYFRRPVRRAALGVGDDCALLAPAAGMQLAVSSDMLVEGRHFFADVYPAHLGHKALAVNLSDLAACGARPLAF TLALALPRADEVWLQGFSEGLLALAGEHGCELVGGDTTQGPLNICITVFGEVPAGQALLRSGARPGDDLWVSGHLGDARL ALDALLGEMPVQLPPQLLAQARERLERPTPRVALGQALRGVASSAIDVSDGLVGDLGHILQASGVGARINTSLAPQLMAA CAGHAPGQLPCGRENLLRCVLAGGDDYELLFTAPPGRRAQVEAAARQGGTRATCIGAIEAEPGLRLLDAQGQQMDAQYLA FDHFR
Specific function: Thiamine biosynthesis. [C]
COG id: COG0611
COG function: function code H; Thiamine monophosphate kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the thiamine-monophosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1786619, Length=328, Percent_Identity=46.0365853658537, Blast_Score=253, Evalue=1e-68,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000728 - InterPro: IPR010918 - InterPro: IPR016188 - InterPro: IPR006283 [H]
Pfam domain/function: PF00586 AIRS; PF02769 AIRS_C [H]
EC number: =2.7.4.16 [H]
Molecular weight: Translated: 34099; Mature: 33967
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEFDLIARYFRRPVRRAALGVGDDCALLAPAAGMQLAVSSDMLVEGRHFFADVYPAHLG CCHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEECCCCEECCHHHHHHHHHHHCC HKALAVNLSDLAACGARPLAFTLALALPRADEVWLQGFSEGLLALAGEHGCELVGGDTTQ CEEEEEEHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCC GPLNICITVFGEVPAGQALLRSGARPGDDLWVSGHLGDARLALDALLGEMPVQLPPQLLA CCEEEEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHH QARERLERPTPRVALGQALRGVASSAIDVSDGLVGDLGHILQASGVGARINTSLAPQLMA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH ACAGHAPGQLPCGRENLLRCVLAGGDDYELLFTAPPGRRAQVEAAARQGGTRATCIGAIE HHCCCCCCCCCCCHHHHHEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEE AEPGLRLLDAQGQQMDAQYLAFDHFR CCCCCEEECCCCCCCCHHHHHHCCCC >Mature Secondary Structure GEFDLIARYFRRPVRRAALGVGDDCALLAPAAGMQLAVSSDMLVEGRHFFADVYPAHLG CHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCEEEECCCCEECCHHHHHHHHHHHCC HKALAVNLSDLAACGARPLAFTLALALPRADEVWLQGFSEGLLALAGEHGCELVGGDTTQ CEEEEEEHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCC GPLNICITVFGEVPAGQALLRSGARPGDDLWVSGHLGDARLALDALLGEMPVQLPPQLLA CCEEEEEEEECCCCCCHHHHHCCCCCCCCEEEECCCCCHHHHHHHHHHCCCCCCCHHHHH QARERLERPTPRVALGQALRGVASSAIDVSDGLVGDLGHILQASGVGARINTSLAPQLMA HHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHH ACAGHAPGQLPCGRENLLRCVLAGGDDYELLFTAPPGRRAQVEAAARQGGTRATCIGAIE HHCCCCCCCCCCCHHHHHEEEEECCCCEEEEEECCCCCCHHHHHHHHCCCCEEEEEEEEE AEPGLRLLDAQGQQMDAQYLAFDHFR CCCCCEEECCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11677609 [H]