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The map label for this gene is ygaD [C]

Identifier: 120609132

GI number: 120609132

Start: 464508

End: 464978

Strand: Reverse

Name: ygaD [C]

Synonym: Aave_0429

Alternate gene names: 120609132

Gene position: 464978-464508 (Counterclockwise)

Preceding gene: 120609133

Following gene: 120609131

Centisome position: 8.69

GC content: 74.31

Gene sequence:

>471_bases
GTGAGCGGCGACATCGCCCTCCTCGCACAGGCGCTCCCGGCCCGCGGCTGGATGCTGGCCACGGCCGAAAGCTGCACCGG
CGGCATGATCGCCGGCGCATGCACCGACCTGGCCGGCTCGAGCCGATGGTTCGAGCGCGGCTTCGTCACCTACTCCAATG
CCGCCAAGACGGAACTGCTGGGCGTGGCCGCCGCGCTCATCGACACGCACGGCGCCGTGAGCGAAGCCGTGGCCCGCGCC
ATGGCGGAAGGCGCCGTGCGCCACTCCCGCGCGCAGGCGGCGCTGTCCGTGACCGGCGTGGCCGGCCCTGAAGGCGGCAG
TACCGCCAAGCCCGTGGGCACCGTCTGGTTCGGCTGGCACGTGGGCGGCACGACGCACAGTGAAATGCGCCGCTTCCCGG
GCGACCGGGCCGCCGTGCGCTCGGCCGCCCGCGACCATGCGATCGCGGGGCTCGCAAGGCTGCTGCGCTGA

Upstream 100 bases:

>100_bases
TCAAAGGCTTCGGCTGGCGCGGCGGCTGGGGCATCCTCTTCGACGACTTCGTGGCAGCGTTCTGCGCGCTGTTCGTGATT
GCACTCTGGAGGGTGCTGTG

Downstream 100 bases:

>100_bases
CCGCCCGCGGCCCGGGTTCATCCGGTGCCTGTCGCCCTTCTGCACGCTTCCTTCTATCTCCCTTGGCGAACCGCCTGCGG
CTACGCCGGGCCGGGCACGC

Product: CinA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 156; Mature: 155

Protein sequence:

>156_residues
MSGDIALLAQALPARGWMLATAESCTGGMIAGACTDLAGSSRWFERGFVTYSNAAKTELLGVAAALIDTHGAVSEAVARA
MAEGAVRHSRAQAALSVTGVAGPEGGSTAKPVGTVWFGWHVGGTTHSEMRRFPGDRAAVRSAARDHAIAGLARLLR

Sequences:

>Translated_156_residues
MSGDIALLAQALPARGWMLATAESCTGGMIAGACTDLAGSSRWFERGFVTYSNAAKTELLGVAAALIDTHGAVSEAVARA
MAEGAVRHSRAQAALSVTGVAGPEGGSTAKPVGTVWFGWHVGGTTHSEMRRFPGDRAAVRSAARDHAIAGLARLLR
>Mature_155_residues
SGDIALLAQALPARGWMLATAESCTGGMIAGACTDLAGSSRWFERGFVTYSNAAKTELLGVAAALIDTHGAVSEAVARAM
AEGAVRHSRAQAALSVTGVAGPEGGSTAKPVGTVWFGWHVGGTTHSEMRRFPGDRAAVRSAARDHAIAGLARLLR

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=147, Percent_Identity=53.7414965986395, Blast_Score=144, Evalue=4e-36,
Organism=Escherichia coli, GI1787818, Length=128, Percent_Identity=41.40625, Blast_Score=110, Evalue=6e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136 [H]

Pfam domain/function: PF02464 CinA [H]

EC number: NA

Molecular weight: Translated: 15974; Mature: 15843

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGDIALLAQALPARGWMLATAESCTGGMIAGACTDLAGSSRWFERGFVTYSNAAKTELL
CCCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHCCCEEECCCHHHHHH
GVAAALIDTHGAVSEAVARAMAEGAVRHSRAQAALSVTGVAGPEGGSTAKPVGTVWFGWH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEEE
VGGTTHSEMRRFPGDRAAVRSAARDHAIAGLARLLR
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
SGDIALLAQALPARGWMLATAESCTGGMIAGACTDLAGSSRWFERGFVTYSNAAKTELL
CCHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHCCCCHHHHCCCEEECCCHHHHHH
GVAAALIDTHGAVSEAVARAMAEGAVRHSRAQAALSVTGVAGPEGGSTAKPVGTVWFGWH
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCEEEEEEEE
VGGTTHSEMRRFPGDRAAVRSAARDHAIAGLARLLR
CCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA