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The map label for this gene is gatC

Identifier: 120608996

GI number: 120608996

Start: 325418

End: 325717

Strand: Reverse

Name: gatC

Synonym: Aave_0293

Alternate gene names: 120608996

Gene position: 325717-325418 (Counterclockwise)

Preceding gene: 120609001

Following gene: 120608995

Centisome position: 6.09

GC content: 66.67

Gene sequence:

>300_bases
ATGGCACTGACACCCCAGGACATTGGCCGCATCGCCAACCTGGCGCGGCTCGAACTGAGTCCCGCCGAAAGTGAGCGCAT
GCTTACCCAGCTCAACGGCTTTTTCGGCATCGTCGAGAAGATGCGGGCTGTGGATACCGCCGGCCTGGAACCCCTCTCCC
ATCCCGTCGCGGCCATCCAGGACATCGCCCTGCGCCTGCGGGAAGACACCGCGAGCGAGCCCGACCAGCGCGAGGCCAAC
CAGCGCAGCGCGCCCGCCGTGGAGCGGGGCCTGTTCCTGGTGCCCAAGGTGATCGAATAA

Upstream 100 bases:

>100_bases
TTGCGGCAAAGCCGGGATAATACCGCATCCCCTGTGAATAACTCCCGCCCGGCCCCACGCCGGCGCAGCTTTACATCCCG
TTTCCGGACCTGTTTTCCCT

Downstream 100 bases:

>100_bases
CAAGAATAAAAGTACGTAATCCATGAGCGAACCCTCCTCTTCCCTGCACACCCTGGGCGTGGCCGAACTGGCCGCGGCGC
TGCGCGGCAAGCGCATCTCC

Product: aspartyl/glutamyl-tRNA amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 99; Mature: 98

Protein sequence:

>99_residues
MALTPQDIGRIANLARLELSPAESERMLTQLNGFFGIVEKMRAVDTAGLEPLSHPVAAIQDIALRLREDTASEPDQREAN
QRSAPAVERGLFLVPKVIE

Sequences:

>Translated_99_residues
MALTPQDIGRIANLARLELSPAESERMLTQLNGFFGIVEKMRAVDTAGLEPLSHPVAAIQDIALRLREDTASEPDQREAN
QRSAPAVERGLFLVPKVIE
>Mature_98_residues
ALTPQDIGRIANLARLELSPAESERMLTQLNGFFGIVEKMRAVDTAGLEPLSHPVAAIQDIALRLREDTASEPDQREANQ
RSAPAVERGLFLVPKVIE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_ACIAC (A1TIW2)

Other databases:

- EMBL:   CP000512
- RefSeq:   YP_968674.1
- ProteinModelPortal:   A1TIW2
- SMR:   A1TIW2
- STRING:   A1TIW2
- GeneID:   4669700
- GenomeReviews:   CP000512_GR
- KEGG:   aav:Aave_0293
- NMPDR:   fig|397945.5.peg.259
- eggNOG:   COG0721
- HOGENOM:   HBG586403
- OMA:   SVTPMAM
- ProtClustDB:   PRK00034
- BioCyc:   AAVE397945:AAVE_0293-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10863; Mature: 10731

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALTPQDIGRIANLARLELSPAESERMLTQLNGFFGIVEKMRAVDTAGLEPLSHPVAAIQ
CCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DIALRLREDTASEPDQREANQRSAPAVERGLFLVPKVIE
HHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCCCHHCC
>Mature Secondary Structure 
ALTPQDIGRIANLARLELSPAESERMLTQLNGFFGIVEKMRAVDTAGLEPLSHPVAAIQ
CCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH
DIALRLREDTASEPDQREANQRSAPAVERGLFLVPKVIE
HHHHHHHHHCCCCCCHHHHHCCCCCHHHCCCCCCCHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA