| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120609001
Identifier: 120609001
GI number: 120609001
Start: 330540
End: 331433
Strand: Reverse
Name: 120609001
Synonym: Aave_0298
Alternate gene names: NA
Gene position: 331433-330540 (Counterclockwise)
Preceding gene: 120609002
Following gene: 120608996
Centisome position: 6.19
GC content: 71.36
Gene sequence:
>894_bases ATGCGCTCCGAACGCCAGGGCCTTCTGGCCCTCCTCCTGGTCACCATGGTCTGGGGAACGACCTTCCCCGCGATGAAGAT GCTGTCCGCGCACCTGGACGCGCTGCAGATCATCTGGATGCGTTTCGCCATCGCGCTGGCCGTGCTCGGCCCGATGTGGC GCGGCATGCGCCGCGCGGAGCTTGGCTGGGGGCTGCTGCTCGGCGCCCTCCTGTTCCTGGCATTCTGGCTGCAGATCGAG GGGCTGGCGCGCACCAGCAGCAACCGCAACGCCTTCGTCACCGGCCTGAACGTGCTGGTCGTGCCGCTGCTGGCCATGGC CGCGCTGGGGCGGCGCTACGGGTGGACGCTGTGGGCCGCGTGCGGCATGGCGCTGGCGGGCATGGCACTGATGTTCCACG AGAACGAGCCCTGGAACCTGGGCGATACGCTGACGCTCGCCAGCACGGTGTTCTATGCCATCTACATCCTCGCGCTGGAG GAATGCGCGCGCCTCACGGCCGCGGCGCCGCTGCGGGCCACGCGCATGGCGGCCATGCAGGCGCTGGTGATGTTCGGCGC CGCCACCGTGCTGGTGGGCGTGCGCCATGGCGGCTATGCCACGTCGGTGGTGCAGATCGCGCAGCTGCCGGGCGATGCGT GGACTGCCGTGGCCTATCTGGGAGTGGTGGCCAGCGTGCTGGTGGTCACGCTGCAGGCGTGGGGCCAGCAGCGCGTGGAC GCCATGCGCAGCGCCATCGTCTTCGGCCTGGAACCCGTGTTCGCGGCGCTCACGGCCTGGGTGCTGATCGGCGAGCGCCT GGGCTGGGCCGGCGTGTGCGGGGCGGCGCTCATCGTCGGCGCGCTGATCGCCAGCCAGCTGCAGCCGCCGCGCTCGCCGC AGGCCACCGGCTGA
Upstream 100 bases:
>100_bases CCGCGGCGCGCCTGCTCGCCGCGCGCCCGGCCCGCCCTCGCGGGCCTTTCCCTTTTCCGGCCCTGCCGCCCTGGCGGCGG CGCCACACCTGCTTCGCCAT
Downstream 100 bases:
>100_bases AGAGCGGCGGCCCGGCAGCCCGGTGTCAGGGCGCGGGCGCCATGACCGGCACGTCGGCCGCGCGCCGCGGCGTGCCCATG GGCGCGCCGGCCTGGCCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAELGWGLLLGALLFLAFWLQIE GLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAACGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALE ECARLTAAAPLRATRMAAMQALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG
Sequences:
>Translated_297_residues MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAELGWGLLLGALLFLAFWLQIE GLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAACGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALE ECARLTAAAPLRATRMAAMQALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG >Mature_297_residues MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAELGWGLLLGALLFLAFWLQIE GLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAACGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALE ECARLTAAAPLRATRMAAMQALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31823; Mature: 31823
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAE CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGWGLLLGALLFLAFWLQIEGLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALEECARLTAAAPLRATRMAAMQ HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAE CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGWGLLLGALLFLAFWLQIEGLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAA HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALEECARLTAAAPLRATRMAAMQ HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH ALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA