Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120609001

Identifier: 120609001

GI number: 120609001

Start: 330540

End: 331433

Strand: Reverse

Name: 120609001

Synonym: Aave_0298

Alternate gene names: NA

Gene position: 331433-330540 (Counterclockwise)

Preceding gene: 120609002

Following gene: 120608996

Centisome position: 6.19

GC content: 71.36

Gene sequence:

>894_bases
ATGCGCTCCGAACGCCAGGGCCTTCTGGCCCTCCTCCTGGTCACCATGGTCTGGGGAACGACCTTCCCCGCGATGAAGAT
GCTGTCCGCGCACCTGGACGCGCTGCAGATCATCTGGATGCGTTTCGCCATCGCGCTGGCCGTGCTCGGCCCGATGTGGC
GCGGCATGCGCCGCGCGGAGCTTGGCTGGGGGCTGCTGCTCGGCGCCCTCCTGTTCCTGGCATTCTGGCTGCAGATCGAG
GGGCTGGCGCGCACCAGCAGCAACCGCAACGCCTTCGTCACCGGCCTGAACGTGCTGGTCGTGCCGCTGCTGGCCATGGC
CGCGCTGGGGCGGCGCTACGGGTGGACGCTGTGGGCCGCGTGCGGCATGGCGCTGGCGGGCATGGCACTGATGTTCCACG
AGAACGAGCCCTGGAACCTGGGCGATACGCTGACGCTCGCCAGCACGGTGTTCTATGCCATCTACATCCTCGCGCTGGAG
GAATGCGCGCGCCTCACGGCCGCGGCGCCGCTGCGGGCCACGCGCATGGCGGCCATGCAGGCGCTGGTGATGTTCGGCGC
CGCCACCGTGCTGGTGGGCGTGCGCCATGGCGGCTATGCCACGTCGGTGGTGCAGATCGCGCAGCTGCCGGGCGATGCGT
GGACTGCCGTGGCCTATCTGGGAGTGGTGGCCAGCGTGCTGGTGGTCACGCTGCAGGCGTGGGGCCAGCAGCGCGTGGAC
GCCATGCGCAGCGCCATCGTCTTCGGCCTGGAACCCGTGTTCGCGGCGCTCACGGCCTGGGTGCTGATCGGCGAGCGCCT
GGGCTGGGCCGGCGTGTGCGGGGCGGCGCTCATCGTCGGCGCGCTGATCGCCAGCCAGCTGCAGCCGCCGCGCTCGCCGC
AGGCCACCGGCTGA

Upstream 100 bases:

>100_bases
CCGCGGCGCGCCTGCTCGCCGCGCGCCCGGCCCGCCCTCGCGGGCCTTTCCCTTTTCCGGCCCTGCCGCCCTGGCGGCGG
CGCCACACCTGCTTCGCCAT

Downstream 100 bases:

>100_bases
AGAGCGGCGGCCCGGCAGCCCGGTGTCAGGGCGCGGGCGCCATGACCGGCACGTCGGCCGCGCGCCGCGGCGTGCCCATG
GGCGCGCCGGCCTGGCCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 297; Mature: 297

Protein sequence:

>297_residues
MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAELGWGLLLGALLFLAFWLQIE
GLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAACGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALE
ECARLTAAAPLRATRMAAMQALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD
AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG

Sequences:

>Translated_297_residues
MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAELGWGLLLGALLFLAFWLQIE
GLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAACGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALE
ECARLTAAAPLRATRMAAMQALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD
AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG
>Mature_297_residues
MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAELGWGLLLGALLFLAFWLQIE
GLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAACGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALE
ECARLTAAAPLRATRMAAMQALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD
AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG

Specific function: Unknown

COG id: COG0697

COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31823; Mature: 31823

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWGLLLGALLFLAFWLQIEGLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALEECARLTAAAPLRATRMAAMQ
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MRSERQGLLALLLVTMVWGTTFPAMKMLSAHLDALQIIWMRFAIALAVLGPMWRGMRRAE
CCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGWGLLLGALLFLAFWLQIEGLARTSSNRNAFVTGLNVLVVPLLAMAALGRRYGWTLWAA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
CGMALAGMALMFHENEPWNLGDTLTLASTVFYAIYILALEECARLTAAAPLRATRMAAMQ
HHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
ALVMFGAATVLVGVRHGGYATSVVQIAQLPGDAWTAVAYLGVVASVLVVTLQAWGQQRVD
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AMRSAIVFGLEPVFAALTAWVLIGERLGWAGVCGAALIVGALIASQLQPPRSPQATG
HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA