Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is glnP [H]

Identifier: 120608917

GI number: 120608917

Start: 232981

End: 233667

Strand: Reverse

Name: glnP [H]

Synonym: Aave_0210

Alternate gene names: 120608917

Gene position: 233667-232981 (Counterclockwise)

Preceding gene: 120608918

Following gene: 120608916

Centisome position: 4.37

GC content: 69.43

Gene sequence:

>687_bases
ATGGCATATGCATTCGACTTCGGCGCCGTCTTCGACTACAGCGGCCAGCTGGCGCAGGGCGCCGCCTTCACGCTGGGGCT
GACGGCGGCCGGTGCCGTGCTGGGCGGCGCGATCGGCGTGGCCGGCGGCGTCTGCCGCGCCTGGCGCATCGCGCCGCTGA
ACTGGCTGTTCAAGCTGTATGTGGAGGCCATCCGCAACACGCCCTTCCTGGTGCAGCTGATGTTCGTGTTCTTCGGCCTG
CCGTCGCTGGGCCTGCAGCTCAATGAATGGCAGGCCTGCCTGCTGACCACCGTGGTCAACCTGGGCGCCTACCTCACGGA
GATCGTGCGGGCCGGCATCCAGGAAACGCCGCGCGGCCAGCTGGAGGCCGCGAGCGCGCTGGGCATGGGCCGCTGGGCCT
GCTTCCGGCACGTGGTGCTGCGGCCCGCGCTGCAGAAGGTGTGGCCCGCGCTCAGCAGCCAGATCGTCATCGTGATGCTG
GGCACATCGGTGGTGTCGCAGATCGCGGCGCAGGACCTGACCTTCGCCGCCAATTTCATCCAGTCGCGCAATTTCCGCGC
GTTCGAGACCTACATCGTGGTGACGGCGCTCTACTTCGCGCTGGCCCTGCTGCTGCGCCAGGCGCTGGCCTGGATCGGGC
AGCACGTCATCGTGGCGCGCCGCGCGCCGGCCGGAGACGCCGCATGA

Upstream 100 bases:

>100_bases
TGTCGCAGCGCTGGATGAAGATGCCGCTGCCCGCCACGCTGTAAGCGGCCGGGACCGCACCGTCCGCACAGGGCCACGTT
GACCGGAAGAGACCTCCTCC

Downstream 100 bases:

>100_bases
TCGCCGACATTCCCCTGCTGCCCATCCTGCTCAAGCTGGCCGAAGGCCTTTGGGCCACCCTGCTGCTGTCGCTCATGGCT
TTCGCGCTGGGCGGCGCGGC

Product: polar amino acid ABC transporter inner membrane subunit

Products: ADP; phosphate; L-glutamine [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 228; Mature: 227

Protein sequence:

>228_residues
MAYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLYVEAIRNTPFLVQLMFVFFGL
PSLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVML
GTSVVSQIAAQDLTFAANFIQSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA

Sequences:

>Translated_228_residues
MAYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLYVEAIRNTPFLVQLMFVFFGL
PSLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVML
GTSVVSQIAAQDLTFAANFIQSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA
>Mature_227_residues
AYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLYVEAIRNTPFLVQLMFVFFGLP
SLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQLEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLG
TSVVSQIAAQDLTFAANFIQSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA

Specific function: Part of the binding-protein-dependent transport system for glutamine; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0765

COG function: function code E; ABC-type amino acid transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787030, Length=203, Percent_Identity=33.9901477832512, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788226, Length=196, Percent_Identity=31.1224489795918, Blast_Score=110, Evalue=9e-26,
Organism=Escherichia coli, GI1786873, Length=210, Percent_Identity=30, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1788646, Length=202, Percent_Identity=27.7227722772277, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787087, Length=238, Percent_Identity=24.7899159663866, Blast_Score=72, Evalue=4e-14,
Organism=Escherichia coli, GI1788645, Length=217, Percent_Identity=26.7281105990783, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787086, Length=219, Percent_Identity=25.1141552511416, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1786874, Length=199, Percent_Identity=27.6381909547739, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI48994930, Length=134, Percent_Identity=28.3582089552239, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010065
- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 24596; Mature: 24465

Theoretical pI: Translated: 9.52; Mature: 9.52

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLY
CCEEECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAIRNTPFLVQLMFVFFGLPSLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQ
HHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANFI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHH
QSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC
>Mature Secondary Structure 
AYAFDFGAVFDYSGQLAQGAAFTLGLTAAGAVLGGAIGVAGGVCRAWRIAPLNWLFKLY
CEEECCCHHHCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEAIRNTPFLVQLMFVFFGLPSLGLQLNEWQACLLTTVVNLGAYLTEIVRAGIQETPRGQ
HHHHCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCH
LEAASALGMGRWACFRHVVLRPALQKVWPALSSQIVIVMLGTSVVSQIAAQDLTFAANFI
HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECHHHHHHHHHHHHHHHHHHH
QSRNFRAFETYIVVTALYFALALLLRQALAWIGQHVIVARRAPAGDAA
HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; L-glutamine [Periplasm]; H2O [C]

Specific reaction: ATP + L-glutamine [Periplasm] + H2O = ADP + phosphate + L-glutamine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]