Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598820

Identifier: 120598820

GI number: 120598820

Start: 2323510

End: 2323632

Strand: Direct

Name: 120598820

Synonym: Sputw3181_2006

Alternate gene names: NA

Gene position: 2323510-2323632 (Clockwise)

Preceding gene: 120598819

Following gene: 120598827

Centisome position: 49.35

GC content: 39.84

Gene sequence:

>123_bases
ATGGATAAAAGTCAACGTTATCTTCGTTGGCTTTCCTATACAGCAATTATCGCTGTATTTTGTGCAGTGATGCTGGCAAC
TGTAGGTAAGGCCATCTGGGTTGTGTTAGAAAACGTCAAATAA

Upstream 100 bases:

>100_bases
AAAACTATCAGAATGCTGATGGCAGTGTGACTATACCAGAAGCATTGCGTTCTTATATGGGTGGGTTAACTCAAATCGGT
TAAGGTATTCGCGCGACGCT

Downstream 100 bases:

>100_bases
CCCTATCAATTTTTTTCAGGTAAAAAAGGCATGTTTCCAAGGGAACATGCCTTTTTGTTTCATTTGTGCGCTCTAGTCTC
AGATGCCCAATATTAGATAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 40; Mature: 40

Protein sequence:

>40_residues
MDKSQRYLRWLSYTAIIAVFCAVMLATVGKAIWVVLENVK

Sequences:

>Translated_40_residues
MDKSQRYLRWLSYTAIIAVFCAVMLATVGKAIWVVLENVK
>Mature_40_residues
MDKSQRYLRWLSYTAIIAVFCAVMLATVGKAIWVVLENVK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 4589; Mature: 4589

Theoretical pI: Translated: 9.89; Mature: 9.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKSQRYLRWLSYTAIIAVFCAVMLATVGKAIWVVLENVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDKSQRYLRWLSYTAIIAVFCAVMLATVGKAIWVVLENVK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA