| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is crcB [H]
Identifier: 120598818
GI number: 120598818
Start: 2321813
End: 2322187
Strand: Direct
Name: crcB [H]
Synonym: Sputw3181_2004
Alternate gene names: 120598818
Gene position: 2321813-2322187 (Clockwise)
Preceding gene: 120598817
Following gene: 120598819
Centisome position: 49.31
GC content: 38.67
Gene sequence:
>375_bases ATGACTAACGTATTATTAGTTGCATTAGGTGGTTCAATTGGGGCGGTTTTTCGTTATCTTATTTCAATATTCATGATCCA AGTATTTGGCAGCAGTTTTCCTTTTGGTACACTGGTGGTCAATGTTATTGGTTCATTTTTTATGGGCGTGATATACGCTC TGGGGCAAATGAGTCATATCAGCCCAGAACTGAAAGCGCTAATAGGTGTTGGCCTATTAGGCGCGTTAACAACGTTTTCG ACTTTCTCTAATGAGACCTTATTGCTGTTGCAAGAAGGAGATTGGCTGAAGGCGATTTTGAATGTGGTGTTGAACCTAAG TTTATGTTTATTTATGGTTTATTTAGGTCAGCAACTGGTTTTTTCACGCATTTAA
Upstream 100 bases:
>100_bases GCCCAGTTTTACTTTCCCACTGAGCGTGGATTTGAAAAGCGGATTAAGGATAAATTGATACAATTAACCCAATTAGACCA AGTCAGTGAGAACAAACGTT
Downstream 100 bases:
>100_bases CTATTAAGAATATATCACATGTTAGATCCTAAATTTTTACGCAACGAATTAGCTGTTACCGCGGAGCGATTGGCCACTCG AGGCTTTATTTTAGATGTCG
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTNVLLVALGGSIGAVFRYLISIFMIQVFGSSFPFGTLVVNVIGSFFMGVIYALGQMSHISPELKALIGVGLLGALTTFS TFSNETLLLLQEGDWLKAILNVVLNLSLCLFMVYLGQQLVFSRI
Sequences:
>Translated_124_residues MTNVLLVALGGSIGAVFRYLISIFMIQVFGSSFPFGTLVVNVIGSFFMGVIYALGQMSHISPELKALIGVGLLGALTTFS TFSNETLLLLQEGDWLKAILNVVLNLSLCLFMVYLGQQLVFSRI >Mature_123_residues TNVLLVALGGSIGAVFRYLISIFMIQVFGSSFPFGTLVVNVIGSFFMGVIYALGQMSHISPELKALIGVGLLGALTTFST FSNETLLLLQEGDWLKAILNVVLNLSLCLFMVYLGQQLVFSRI
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
Organism=Escherichia coli, GI1786842, Length=104, Percent_Identity=45.1923076923077, Blast_Score=79, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 13441; Mature: 13310
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNVLLVALGGSIGAVFRYLISIFMIQVFGSSFPFGTLVVNVIGSFFMGVIYALGQMSHI CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC SPELKALIGVGLLGALTTFSTFSNETLLLLQEGDWLKAILNVVLNLSLCLFMVYLGQQLV CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSRI HHCC >Mature Secondary Structure TNVLLVALGGSIGAVFRYLISIFMIQVFGSSFPFGTLVVNVIGSFFMGVIYALGQMSHI CCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC SPELKALIGVGLLGALTTFSTFSNETLLLLQEGDWLKAILNVVLNLSLCLFMVYLGQQLV CHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH FSRI HHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA