| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
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The map label for this gene is eptA [H]
Identifier: 120598730
GI number: 120598730
Start: 2208418
End: 2210043
Strand: Direct
Name: eptA [H]
Synonym: Sputw3181_1915
Alternate gene names: 120598730
Gene position: 2208418-2210043 (Clockwise)
Preceding gene: 120598729
Following gene: 120598731
Centisome position: 46.9
GC content: 40.59
Gene sequence:
>1626_bases GTGCTAACAAGATTTAAGACCTTATCAGTGAATCAATTTACGCTGATCACTGCATTGTTCTATGTGTGTATTTTTAATAT CCCACTCTTTACTTTTATTCACGAAGGTATTGAAAAACAGCCTGAGGTAGATCCGCTTTTTATCGCCAGTATGCCACTGT TTTTTACCTTTGCCCTTGGCTTGGTATTTTCGTTTTTTTCGGTGAAGTATCTACTAAAACCCTTGTTTATCGTGCTCACC TTAATGTCGTCGACGGTATTTTTTGCCACGATGAAATACCAGGTTGTATTTGATTACGGCATGATTGAAAACATTTTTCA GACGAATCAGGCGGAAGCCTGGATGTATATTAATGTTGCTTCAGTGGCTAATTTACTGTTAACAGGGATATTGCCAGCAT ACCTTATCTATAAAGCCGATATTCAATACAAACCGTTCTTTAAGGAGTTGGCACATAAAGTATTTTTTATGCTAATAATG CTTGCTGGTATCGGGGTGATTGGTTTTTTCTATTTTCAGGATTACGCCACGTTTGGTCGAAATAACGATGGCCTGAGACG TTATATTGTGCCAACTTATTTTGTGGGTTCGGTCTCTAAGTACATGTATTCACATTATTTACAAACACCAATCCAATATG AAACACTTGGATTGGATGCAAAAGATGTCAGTGCTACCCCTAACCATAAACCCAACTTATTGGTGCTGGTGGTCGGGGAA ACTGCACGTTCGATGAACTACCAATATTATGGCTATAAAAAGCCAACCAATGCCTATACCCAAGATCTTGGCTTGATAGT GTTTAAGGATACCCATTCCTGTGGTACCGCAACGGCGGTGTCCTTGCCCTGTATGTTTTCACGAATGGGGCGCAAAGATT ACGATTCACGCCGCGCTTATGCTCAAGATACGGTTATGGATGTGCTGAAACATGCTGATATTGAGGTGAAGTGGTTTGAT AATGACTCTGGGTGTAAAGGCGTTTGCGATCGCATAGAGAATATCACTGTTGATCTCAATAGTGATCTTAAACTCTGCTC TGGGCAATATTGTTTTGATCAGGTGTTATTAGAGAAATTAGATGAGGCGCTTAATAGCGCAAAAGCGAAAGACACTGTGC TTGCCTTGCATATTATTGGCAGTCACGGTCCAACTTATTTTCTACGTTATCCCCCGCAATACCGTCGATTTATACCCGAT TGCCAACGCAGTGATATCCAAAATTGCACCAACGAAGAGTTGGTAAATACCTATGACAACACGCTGCTGTATACGGACTA TATAGTGAGCGAAGTCGTTAAAAAACTTCAAAAACAGCAAGATAAATTTAATACCGCGATGTTATATCTCAGTGATCATG GTGAATCATTGGGGGAAAAGGGGATGTATTTACATGGTGCGCCTTACAGTATTGCGCCGATAGAACAAACCAGTATCCCC ATGTTAGCTTGGGTCTCTGATCATTTCAGTCAAGATAATCATTTAAATATGGCGTGCTTGGCCGAACATGCTGACAAGGG AGGATACTCCCATGACAATTTATTCGATAGCCTCTTAGGGTTAATGAATGTGAAGACTGAGGTGTACCAAAGCCATCTTG ATATTTTTGCCTCTTGTCGTAGCTAA
Upstream 100 bases:
>100_bases GGGCGTCGCTTGCTACTATGGCGCGAAAATTAAGTCGTAAGATTACCTTAAGAAAATTAAGTTAGCTTCGGCCAACGGCC AATTTGAGAGAGCGTTATCG
Downstream 100 bases:
>100_bases TGGACGGTATTAGATAAGATAAACCTATGCGAATGTCAGGTATAGGTTTAAAACCATCACAATAATTATGCTTCCCCATA TCCAAATTCGATCAGTTGAG
Product: sulfatase
Products: NA
Alternate protein names: Polymyxin resistance protein pmrC [H]
Number of amino acids: Translated: 541; Mature: 541
Protein sequence:
>541_residues MLTRFKTLSVNQFTLITALFYVCIFNIPLFTFIHEGIEKQPEVDPLFIASMPLFFTFALGLVFSFFSVKYLLKPLFIVLT LMSSTVFFATMKYQVVFDYGMIENIFQTNQAEAWMYINVASVANLLLTGILPAYLIYKADIQYKPFFKELAHKVFFMLIM LAGIGVIGFFYFQDYATFGRNNDGLRRYIVPTYFVGSVSKYMYSHYLQTPIQYETLGLDAKDVSATPNHKPNLLVLVVGE TARSMNYQYYGYKKPTNAYTQDLGLIVFKDTHSCGTATAVSLPCMFSRMGRKDYDSRRAYAQDTVMDVLKHADIEVKWFD NDSGCKGVCDRIENITVDLNSDLKLCSGQYCFDQVLLEKLDEALNSAKAKDTVLALHIIGSHGPTYFLRYPPQYRRFIPD CQRSDIQNCTNEELVNTYDNTLLYTDYIVSEVVKKLQKQQDKFNTAMLYLSDHGESLGEKGMYLHGAPYSIAPIEQTSIP MLAWVSDHFSQDNHLNMACLAEHADKGGYSHDNLFDSLLGLMNVKTEVYQSHLDIFASCRS
Sequences:
>Translated_541_residues MLTRFKTLSVNQFTLITALFYVCIFNIPLFTFIHEGIEKQPEVDPLFIASMPLFFTFALGLVFSFFSVKYLLKPLFIVLT LMSSTVFFATMKYQVVFDYGMIENIFQTNQAEAWMYINVASVANLLLTGILPAYLIYKADIQYKPFFKELAHKVFFMLIM LAGIGVIGFFYFQDYATFGRNNDGLRRYIVPTYFVGSVSKYMYSHYLQTPIQYETLGLDAKDVSATPNHKPNLLVLVVGE TARSMNYQYYGYKKPTNAYTQDLGLIVFKDTHSCGTATAVSLPCMFSRMGRKDYDSRRAYAQDTVMDVLKHADIEVKWFD NDSGCKGVCDRIENITVDLNSDLKLCSGQYCFDQVLLEKLDEALNSAKAKDTVLALHIIGSHGPTYFLRYPPQYRRFIPD CQRSDIQNCTNEELVNTYDNTLLYTDYIVSEVVKKLQKQQDKFNTAMLYLSDHGESLGEKGMYLHGAPYSIAPIEQTSIP MLAWVSDHFSQDNHLNMACLAEHADKGGYSHDNLFDSLLGLMNVKTEVYQSHLDIFASCRS >Mature_541_residues MLTRFKTLSVNQFTLITALFYVCIFNIPLFTFIHEGIEKQPEVDPLFIASMPLFFTFALGLVFSFFSVKYLLKPLFIVLT LMSSTVFFATMKYQVVFDYGMIENIFQTNQAEAWMYINVASVANLLLTGILPAYLIYKADIQYKPFFKELAHKVFFMLIM LAGIGVIGFFYFQDYATFGRNNDGLRRYIVPTYFVGSVSKYMYSHYLQTPIQYETLGLDAKDVSATPNHKPNLLVLVVGE TARSMNYQYYGYKKPTNAYTQDLGLIVFKDTHSCGTATAVSLPCMFSRMGRKDYDSRRAYAQDTVMDVLKHADIEVKWFD NDSGCKGVCDRIENITVDLNSDLKLCSGQYCFDQVLLEKLDEALNSAKAKDTVLALHIIGSHGPTYFLRYPPQYRRFIPD CQRSDIQNCTNEELVNTYDNTLLYTDYIVSEVVKKLQKQQDKFNTAMLYLSDHGESLGEKGMYLHGAPYSIAPIEQTSIP MLAWVSDHFSQDNHLNMACLAEHADKGGYSHDNLFDSLLGLMNVKTEVYQSHLDIFASCRS
Specific function: Catalyzes the addition of a phosphoethanolamine moiety to the lipid A. The phosphoethanolamine modification is required for resistance to polymyxin [H]
COG id: COG2194
COG function: function code R; Predicted membrane-associated, metal-dependent hydrolase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoethanolamine transferase family. EptA subfamily [H]
Homologues:
Organism=Escherichia coli, GI87082372, Length=529, Percent_Identity=40.0756143667297, Blast_Score=379, Evalue=1e-106, Organism=Escherichia coli, GI87082286, Length=457, Percent_Identity=26.0393873085339, Blast_Score=140, Evalue=2e-34, Organism=Escherichia coli, GI87082223, Length=258, Percent_Identity=25.5813953488372, Blast_Score=74, Evalue=3e-14, Organism=Escherichia coli, GI1790392, Length=322, Percent_Identity=25.1552795031056, Blast_Score=72, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017849 - InterPro: IPR017850 - InterPro: IPR012549 - InterPro: IPR000917 [H]
Pfam domain/function: PF08019 DUF1705; PF00884 Sulfatase [H]
EC number: NA
Molecular weight: Translated: 61777; Mature: 61777
Theoretical pI: Translated: 6.34; Mature: 6.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTRFKTLSVNQFTLITALFYVCIFNIPLFTFIHEGIEKQPEVDPLFIASMPLFFTFALG CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH LVFSFFSVKYLLKPLFIVLTLMSSTVFFATMKYQVVFDYGMIENIFQTNQAEAWMYINVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHCCCCCEEEEEEHH SVANLLLTGILPAYLIYKADIQYKPFFKELAHKVFFMLIMLAGIGVIGFFYFQDYATFGR HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NNDGLRRYIVPTYFVGSVSKYMYSHYLQTPIQYETLGLDAKDVSATPNHKPNLLVLVVGE CCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECC TARSMNYQYYGYKKPTNAYTQDLGLIVFKDTHSCGTATAVSLPCMFSRMGRKDYDSRRAY CHHHCCCEEECCCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH AQDTVMDVLKHADIEVKWFDNDSGCKGVCDRIENITVDLNSDLKLCSGQYCFDQVLLEKL HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEECCCCHHHCCCHHHHHHHHHHH DEALNSAKAKDTVLALHIIGSHGPTYFLRYPPQYRRFIPDCQRSDIQNCTNEELVNTYDN HHHHHCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHCCCCHHHHHHCCCCHHHHHHHCC TLLYTDYIVSEVVKKLQKQQDKFNTAMLYLSDHGESLGEKGMYLHGAPYSIAPIEQTSIP CEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEECCCCEECCCCCCCCC MLAWVSDHFSQDNHLNMACLAEHADKGGYSHDNLFDSLLGLMNVKTEVYQSHLDIFASCR HHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC S C >Mature Secondary Structure MLTRFKTLSVNQFTLITALFYVCIFNIPLFTFIHEGIEKQPEVDPLFIASMPLFFTFALG CCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEHHHHHHHHHHHH LVFSFFSVKYLLKPLFIVLTLMSSTVFFATMKYQVVFDYGMIENIFQTNQAEAWMYINVA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEECHHHHHHHHHCCCCCEEEEEEHH SVANLLLTGILPAYLIYKADIQYKPFFKELAHKVFFMLIMLAGIGVIGFFYFQDYATFGR HHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NNDGLRRYIVPTYFVGSVSKYMYSHYLQTPIQYETLGLDAKDVSATPNHKPNLLVLVVGE CCCCCEEEECHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCCCCEEEEEECC TARSMNYQYYGYKKPTNAYTQDLGLIVFKDTHSCGTATAVSLPCMFSRMGRKDYDSRRAY CHHHCCCEEECCCCCCCHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHCCCCCCHHHHHH AQDTVMDVLKHADIEVKWFDNDSGCKGVCDRIENITVDLNSDLKLCSGQYCFDQVLLEKL HHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHCCEEEEECCCCHHHCCCHHHHHHHHHHH DEALNSAKAKDTVLALHIIGSHGPTYFLRYPPQYRRFIPDCQRSDIQNCTNEELVNTYDN HHHHHCCCCCCEEEEEEEECCCCCEEEEECCHHHHHHCCCCHHHHHHCCCCHHHHHHHCC TLLYTDYIVSEVVKKLQKQQDKFNTAMLYLSDHGESLGEKGMYLHGAPYSIAPIEQTSIP CEEEHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCCCEEECCCCEECCCCCCCCC MLAWVSDHFSQDNHLNMACLAEHADKGGYSHDNLFDSLLGLMNVKTEVYQSHLDIFASCR HHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7610040; 9278503; 8282725 [H]