| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is marR [C]
Identifier: 120598728
GI number: 120598728
Start: 2205375
End: 2205824
Strand: Direct
Name: marR [C]
Synonym: Sputw3181_1913
Alternate gene names: 120598728
Gene position: 2205375-2205824 (Clockwise)
Preceding gene: 120598727
Following gene: 120598729
Centisome position: 46.84
GC content: 46.67
Gene sequence:
>450_bases ATGACAGCGGGGCATCCCAATACCACTCAACATCATTCGACTGATCACAGCTTGAACCATGTGATTATTGAGTTTTACGA AAAGCTGTCGTCTTGGGAACATGCTATCGTGCGTGACAAAGGCTTCAGCTTGTCGCAGGTACATACCATTGAGTTACTCG GCGTACATGGCGCCATGAGGATGAAGGAACTGGCCGATAAAATCGGTGTCACTACGGGTACCCTTACCGTACAAATCGAT AAAATGGTGGAAGCTGAGTGGGTTGTACGTCGTCCCCATGAAACCGATCGTCGTTCGATTCTGGTGGAGTTAACCGAAAA GGGCCAAACTTTGTTCCTCGAACATGATGCTCTGCATCTACAGCTCACCACAGATCTCACCGCTAAAATGAGCAGTGAAG AACGTATCGTGCTGCTCAATTTATTGTCTCGTATGAATAACGAGTTTTAA
Upstream 100 bases:
>100_bases GCTATTTTAATCAGTTACTGACTCAATTTCCTGAGTTATCACATATCACTATTGAATTACATACGTGTCGCCAAAGCGAG TGTTTGGCTAAGGAAGTTTA
Downstream 100 bases:
>100_bases TTTACTCTATTTCAGCCACTAAAAAGCGTCCCTCGTGGACGTTTTTTTATAGCACGACATCCTTAAAAACGCGATTCATT CTAGATTAATCATCTGCTAT
Product: MarR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator; Transcriptional Regulator MarR Family; MarR-Family Transcriptional Regulator; Regulatory Protein MarR; Transcriptional Regulator Protein; Transcriptional Regulator MarR Family Protein
Number of amino acids: Translated: 149; Mature: 148
Protein sequence:
>149_residues MTAGHPNTTQHHSTDHSLNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQID KMVEAEWVVRRPHETDRRSILVELTEKGQTLFLEHDALHLQLTTDLTAKMSSEERIVLLNLLSRMNNEF
Sequences:
>Translated_149_residues MTAGHPNTTQHHSTDHSLNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQID KMVEAEWVVRRPHETDRRSILVELTEKGQTLFLEHDALHLQLTTDLTAKMSSEERIVLLNLLSRMNNEF >Mature_148_residues TAGHPNTTQHHSTDHSLNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVHGAMRMKELADKIGVTTGTLTVQIDK MVEAEWVVRRPHETDRRSILVELTEKGQTLFLEHDALHLQLTTDLTAKMSSEERIVLLNLLSRMNNEF
Specific function: Repressor Of The Marrab Operon Which Is Involved In The Activation Of Both Antibiotic Resistance And Oxidative Stress Genes. Binds To The Maro Operator/Promoter Site. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17034; Mature: 16903
Theoretical pI: Translated: 6.43; Mature: 6.43
Prosite motif: PS50995 HTH_MARR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGHPNTTQHHSTDHSLNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVHGAMR CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHHCCCCCCCCEEEEEEEECCHHHH MKELADKIGVTTGTLTVQIDKMVEAEWVVRRPHETDRRSILVELTEKGQTLFLEHDALHL HHHHHHHHCCCCCEEEEEEECHHCHHHEEECCCCCCCCEEEEEEECCCCEEEEECCEEEE QLTTDLTAKMSSEERIVLLNLLSRMNNEF EEECCCCCCCCCCCCCHHHHHHHHHCCCC >Mature Secondary Structure TAGHPNTTQHHSTDHSLNHVIIEFYEKLSSWEHAIVRDKGFSLSQVHTIELLGVHGAMR CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEEHHCCCCCCCCEEEEEEEECCHHHH MKELADKIGVTTGTLTVQIDKMVEAEWVVRRPHETDRRSILVELTEKGQTLFLEHDALHL HHHHHHHHCCCCCEEEEEEECHHCHHHEEECCCCCCCCEEEEEEECCCCEEEEECCEEEE QLTTDLTAKMSSEERIVLLNLLSRMNNEF EEECCCCCCCCCCCCCHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA