Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is gsk [H]

Identifier: 120598530

GI number: 120598530

Start: 1971194

End: 1972498

Strand: Direct

Name: gsk [H]

Synonym: Sputw3181_1713

Alternate gene names: 120598530

Gene position: 1971194-1972498 (Clockwise)

Preceding gene: 120598529

Following gene: 120598531

Centisome position: 41.87

GC content: 45.29

Gene sequence:

>1305_bases
ATGAAGTTTCCCGGTCAGCGCAAATCGAAACATTATTTTCCAGTAAAAACCCGAGATCCGTTGCTTGAACAGCTGACTCA
ACAACCTCAACCGTTTGCGACTTATATCAGCGGTATCGATCAAACCTTAGTGGATATCGAAGCGAAAGTAGAAGATGAAT
TGCTTAGCAGATATGGCTTACCCAAAGGTAATTCAACCCTCATAAATGATGAACAGGCCCACAGACTTTACACAGAGTTA
AAAATTCATGGCCTGATCAGCGATGAATTTGCTGGTGGCACTATCGGTAATACAGTGCACAATTATTCCATTTTGGCCGA
TGACCGTTCAGTGTTATTTGGGGTGATGAGCCAAAATATCGAAGTGGGTAGTTATGCCTATCGTTACCTTTGCAACACAT
CCTCAAAAGTTGATCTTAACTATCTGCAACCCGTCGATGGACCTATTGGCCGTTGTTTTACGTTAATTTCTGATTGTGGT
GAACGCACTTTTGCCATCAGCAAAGGTGCAATGGATAAACTTACTCCAGAGTTTATCGATAAAGATGTCGTGCAGGGCAG
TTCGGCTTTAGTGCTAACGGCATACTTAATGCGTGCCAGTGGCGGCGATCGAATTACCGATGCGGCTATGTGCGCTATTG
AATATGCCAAAGCTGCTGATGTGCCCGTGGTATTAACATTAGGTACACGTTTTTTGATTGAAGAAGATCCCCTCTGGTGG
CAGAACTTTATTAAAGAACATGTCACCATTCTGGCGATGAATGAGGATGAAGGTGAAGCCTTAACGGGGTCGCGCGACCC
TCTGCTTGCCAGTGAAAAAGCGCTAGAGTGGTGTGATATGGTACTCACCACTGCGGGGCCAATCGGCCTTTATACCGCAG
GTTACACTGAGGATTCTGAAAAGCGTGAAACGACCCATACTTTACTGCCGGGTGCTATCCCTGAATTTAATCGCTATGAA
TTCTCCCGCCCCAAATTAAAAAGTGACTGTGAAACACCCATCAAAGTGTATGCCCATATTTCACCCTATATGGGCGGCCC
TGAAAAAATCGGCAACACTAATGGTGCGGGTGATGGCGCATTATCGGCGTTATTGCACGATTTAGCGGCCAATACTTTCC
ATAAAACCAATGTGCCAGGCTCGAGTAAACATAAGCGCGATGGTTTGTGTTATTCCTCATTCTCGCAAATTTGTAAATAT
GCTAACCGTGTCGCCTATGAAGTGCTTGCACAGCATAGCCCGCGTTTATCCCGTGGCTTGCCTGAACGGGAAGACAGCTT
AGAAGAATCCTATTGGGAAAGATAA

Upstream 100 bases:

>100_bases
ATTTTTGGTCTCTCTAGCCTAGACTCATTATTTTTAGGACTCTGGCGAGTTTATCTCGTCATAACGCCAATTAGCATGGA
TGCCAGGAAAGAGAACCACT

Downstream 100 bases:

>100_bases
GCTATCGCTTCTTGGCTTATCTCAAGCTCACGATTTAATGCAAGCGCAATAACAGCCTATTGTTATTGCGCTTGTTTTTA
GCACCTTATATCAATAATTA

Product: inosine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 434; Mature: 434

Protein sequence:

>434_residues
MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGLPKGNSTLINDEQAHRLYTEL
KIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNIEVGSYAYRYLCNTSSKVDLNYLQPVDGPIGRCFTLISDCG
ERTFAISKGAMDKLTPEFIDKDVVQGSSALVLTAYLMRASGGDRITDAAMCAIEYAKAADVPVVLTLGTRFLIEEDPLWW
QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSEKRETTHTLLPGAIPEFNRYE
FSRPKLKSDCETPIKVYAHISPYMGGPEKIGNTNGAGDGALSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQICKY
ANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER

Sequences:

>Translated_434_residues
MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGLPKGNSTLINDEQAHRLYTEL
KIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNIEVGSYAYRYLCNTSSKVDLNYLQPVDGPIGRCFTLISDCG
ERTFAISKGAMDKLTPEFIDKDVVQGSSALVLTAYLMRASGGDRITDAAMCAIEYAKAADVPVVLTLGTRFLIEEDPLWW
QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSEKRETTHTLLPGAIPEFNRYE
FSRPKLKSDCETPIKVYAHISPYMGGPEKIGNTNGAGDGALSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQICKY
ANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER
>Mature_434_residues
MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGLPKGNSTLINDEQAHRLYTEL
KIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNIEVGSYAYRYLCNTSSKVDLNYLQPVDGPIGRCFTLISDCG
ERTFAISKGAMDKLTPEFIDKDVVQGSSALVLTAYLMRASGGDRITDAAMCAIEYAKAADVPVVLTLGTRFLIEEDPLWW
QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSEKRETTHTLLPGAIPEFNRYE
FSRPKLKSDCETPIKVYAHISPYMGGPEKIGNTNGAGDGALSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQICKY
ANRVAYEVLAQHSPRLSRGLPEREDSLEESYWER

Specific function: Unknown

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI1786684, Length=434, Percent_Identity=69.1244239631336, Blast_Score=643, Evalue=0.0,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.73 [H]

Molecular weight: Translated: 48175; Mature: 48175

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGL
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKGNSTLINDEQAHRLYTELKIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNI
CCCCCCEECCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCC
EVGSYAYRYLCNTSSKVDLNYLQPVDGPIGRCFTLISDCGERTFAISKGAMDKLTPEFID
CHHHHHHHHHCCCCCCCEEHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHH
KDVVQGSSALVLTAYLMRASGGDRITDAAMCAIEYAKAADVPVVLTLGTRFLIEEDPLWW
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHH
QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSE
HHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCH
KRETTHTLLPGAIPEFNRYEFSRPKLKSDCETPIKVYAHISPYMGGPEKIGNTNGAGDGA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCHHH
LSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQICKYANRVAYEVLAQHSPRLSRGL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PEREDSLEESYWER
CCHHHHHHHHHCCC
>Mature Secondary Structure
MKFPGQRKSKHYFPVKTRDPLLEQLTQQPQPFATYISGIDQTLVDIEAKVEDELLSRYGL
CCCCCCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PKGNSTLINDEQAHRLYTELKIHGLISDEFAGGTIGNTVHNYSILADDRSVLFGVMSQNI
CCCCCCEECCHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCC
EVGSYAYRYLCNTSSKVDLNYLQPVDGPIGRCFTLISDCGERTFAISKGAMDKLTPEFID
CHHHHHHHHHCCCCCCCEEHCCCCCCCHHHHHHHHHHHCCCCEEEECCCCHHHCCHHHHH
KDVVQGSSALVLTAYLMRASGGDRITDAAMCAIEYAKAADVPVVLTLGTRFLIEEDPLWW
HHHHCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCEEEEECCCHHH
QNFIKEHVTILAMNEDEGEALTGSRDPLLASEKALEWCDMVLTTAGPIGLYTAGYTEDSE
HHHHHHCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCH
KRETTHTLLPGAIPEFNRYEFSRPKLKSDCETPIKVYAHISPYMGGPEKIGNTNGAGDGA
HHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCHHHCCCCCCCCHHH
LSALLHDLAANTFHKTNVPGSSKHKRDGLCYSSFSQICKYANRVAYEVLAQHSPRLSRGL
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHCCC
PEREDSLEESYWER
CCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]