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The map label for this gene is 120598470

Identifier: 120598470

GI number: 120598470

Start: 1895543

End: 1896214

Strand: Direct

Name: 120598470

Synonym: Sputw3181_1653

Alternate gene names: NA

Gene position: 1895543-1896214 (Clockwise)

Preceding gene: 120598469

Following gene: 120598473

Centisome position: 40.26

GC content: 45.98

Gene sequence:

>672_bases
ATGAAGATGCGATTAAATTGGCGGGCTCTGCGCTGTCAGCATCAACTGTTCAAAGATTATTATCAATCACTTGTGCCTTT
ACTCTCGATGCCTGTATCCGAAGCCCCTTTAATGGCGATGGATTTAGAGATGACGGGGCTCGATCCTTTGCAAGATCAAA
TACTCAGTATAGGTCTCGTGCCTATTGAACACGGCGTGATCCCACTTGAGGGGGCACTGCAAAAGTTAGTGCAAATTCGG
GGCAGCGTTGGCCAAAGTGCCACTATTCACGGCATTCTCGATAATCATTTAGTACAAGCAGTCACCATTGAAGACGCCAT
GGCATGGTTTATTGCTAAAACACGTGGCAGAGTGTTGGTTGCGCATCATTCCCCATTAGATTGCCGATTTTTACAGCAGG
ATATTTTGGCTATTTATCATCAAGCGGTATTTTTACCCTCGATAGATACCTTAATGCTTGAAAAGCGTCGATTGTTACGA
GGACATCATGCTATTAAAGAAGGTAGTTTACGCCTTGGTGCTTGCCGTGAACGTTATGGTTTACCAGTCTATTCAGCCCA
TAGTGCATTAACTGATGCCTTAGCTTGCGCTGAACTGTTACTCGCGCAGGTGGCTGCAATGGATGGGGCAAGGCAGCTCA
AAGTGGCTGAGCTAATGCAGCAATCTTCCTGA

Upstream 100 bases:

>100_bases
AGTTCGCCATCAATTACGGGACGCCTTTAAGGTGGTACATGATGCTCAATCTGGCATGAAAATGAAATTTATGCGGAGCT
TTTAGGTGAGTATTCTGTTG

Downstream 100 bases:

>100_bases
TGTTGTTTGTTATTATCTCGCTTTTCATAAGGTTAACTAGATGATTATGTTTGTTGTACGTTCGCATTTGTAGACGGTCT
TTCATTGCTTTATCAGGAAG

Product: exonuclease, RNase T and DNA polymerase III

Products: NA

Alternate protein names: Exonuclease RNAse T And DNA Polymerase III; DNA Polymerase III Epsilon Subunit; Exonuclease; DNA Polymerase Exonuclease Activity; DNA Polymerase III Subunit; DNA Polymerase III Epsilon Subunit-Like Protein; DNA Polymerase III; Exonuclease Superfamily; DNA Polymerase; DNA Polymerase III PolC-Type; 3-5' Exonuclease; Exonuclase; DNA Polymerase III Epsilon-Subunit Paralog

Number of amino acids: Translated: 223; Mature: 223

Protein sequence:

>223_residues
MKMRLNWRALRCQHQLFKDYYQSLVPLLSMPVSEAPLMAMDLEMTGLDPLQDQILSIGLVPIEHGVIPLEGALQKLVQIR
GSVGQSATIHGILDNHLVQAVTIEDAMAWFIAKTRGRVLVAHHSPLDCRFLQQDILAIYHQAVFLPSIDTLMLEKRRLLR
GHHAIKEGSLRLGACRERYGLPVYSAHSALTDALACAELLLAQVAAMDGARQLKVAELMQQSS

Sequences:

>Translated_223_residues
MKMRLNWRALRCQHQLFKDYYQSLVPLLSMPVSEAPLMAMDLEMTGLDPLQDQILSIGLVPIEHGVIPLEGALQKLVQIR
GSVGQSATIHGILDNHLVQAVTIEDAMAWFIAKTRGRVLVAHHSPLDCRFLQQDILAIYHQAVFLPSIDTLMLEKRRLLR
GHHAIKEGSLRLGACRERYGLPVYSAHSALTDALACAELLLAQVAAMDGARQLKVAELMQQSS
>Mature_223_residues
MKMRLNWRALRCQHQLFKDYYQSLVPLLSMPVSEAPLMAMDLEMTGLDPLQDQILSIGLVPIEHGVIPLEGALQKLVQIR
GSVGQSATIHGILDNHLVQAVTIEDAMAWFIAKTRGRVLVAHHSPLDCRFLQQDILAIYHQAVFLPSIDTLMLEKRRLLR
GHHAIKEGSLRLGACRERYGLPVYSAHSALTDALACAELLLAQVAAMDGARQLKVAELMQQSS

Specific function: Unknown

COG id: COG0847

COG function: function code L; DNA polymerase III, epsilon subunit and related 3'-5' exonucleases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24804; Mature: 24804

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKMRLNWRALRCQHQLFKDYYQSLVPLLSMPVSEAPLMAMDLEMTGLDPLQDQILSIGLV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCE
PIEHGVIPLEGALQKLVQIRGSVGQSATIHGILDNHLVQAVTIEDAMAWFIAKTRGRVLV
ECCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
AHHSPLDCRFLQQDILAIYHQAVFLPSIDTLMLEKRRLLRGHHAIKEGSLRLGACRERYG
EECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
LPVYSAHSALTDALACAELLLAQVAAMDGARQLKVAELMQQSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MKMRLNWRALRCQHQLFKDYYQSLVPLLSMPVSEAPLMAMDLEMTGLDPLQDQILSIGLV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCHHHHHHHHHCCE
PIEHGVIPLEGALQKLVQIRGSVGQSATIHGILDNHLVQAVTIEDAMAWFIAKTRGRVLV
ECCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
AHHSPLDCRFLQQDILAIYHQAVFLPSIDTLMLEKRRLLRGHHAIKEGSLRLGACRERYG
EECCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHC
LPVYSAHSALTDALACAELLLAQVAAMDGARQLKVAELMQQSS
CCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA