Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is zipA [H]

Identifier: 120598461

GI number: 120598461

Start: 1884002

End: 1885030

Strand: Direct

Name: zipA [H]

Synonym: Sputw3181_1644

Alternate gene names: 120598461

Gene position: 1884002-1885030 (Clockwise)

Preceding gene: 120598460

Following gene: 120598462

Centisome position: 40.01

GC content: 45.29

Gene sequence:

>1029_bases
ATGGAAGATTTGCAACTAGTTTTGTTCATTTTGGGCGCCATAGCCATAGTTGCTGTGCTGGTGCATGGATTTTGGTCTAT
CAGAAGGCAACAACCTAAGTCATTAAAAGATAGCCCTATGGGCAACTTTTATAAGCAACAAGCGGATAAGGAAAGCCCGC
CTAAACGTGTTGATGCCGATGGATTTGATGCGGACGGTATTGGCGCTGTACGAGTGCGTAAGGTGGGGGAGTCGAATCCC
CATGAGACGCCACCAATTAGCCCCTATCTTAAACAAGACGTTAAAGCTGAACCTAAACCATTATTCAAGCACACAACGTC
AACTGAGATAAAGCAAGAACCCGTTCCACAACCGGATTTCAGTTTGCAGTCGCCTTTAGCGACAGAACAACAGCGTGGCG
CTAAAGTATCCCGCCAAGAACCTGTGCTAAATGGTCATGTCCCGCCGTTAGGCCAATCCCATGCGGCGATGGTCGCTCAA
AAAGCGCTTGAACAGGAAAAACACGCCCAAAGCACAACGGTACCGACTCAAACAGCCCTATTTGATGAAGACGCTTATCT
AGAAAATACTGAGTCAGAAGATGAGTATGCTGAAGAAACCGTGGACGAAGGTTTAGATGAGCCCCGTGATGTTTTGGTAT
TACACGTGGTCGCCAAAGAAGGGCAGCAGTTAAATGGTGCTGAATTACTACCGTGCTTTTTAACCTTAAATTTTAAATAT
GGTGATATGAATATTTTCCACCGCCATGTTGATAATGCAGGTAATGGGAAGGTATTGTTTTCCATCGCTAATATGTTAAA
GCCTGGAGTCTTCGATCCCGATAATATGGAGCAATTTAGCACTCAAGGAGTGGTGTTTTTTATGACCTTGCCTTGCTATG
GCGATGCCTTAATGAATTTTTCTATTATGCTGAACTCAGCGCGCCAACTCGCTGATGATATTGATGCAGTCGTGCTCGAC
GGTCAACGCCAACCTTGGGGCGAGTTCACTAAACAAGATTATTTACACCGTATTCGCGCTAATGCGTAA

Upstream 100 bases:

>100_bases
CTATGTACGAGCCGGGTGTATCTCGTATAGTTGCAGTAGATATAGAGCAAGCGGTGGCGATGGCTGACGCTGGATAACTA
GAAGAAAGACAGGGTAACCA

Downstream 100 bases:

>100_bases
CATTAAATCACTCTGACATCATGAGGCCGCAATTGCGGCCTCATTTTTGTGTTCTAAAGAGATCTGGATAAAAAATATGC
AAGACATTCAACTCGATAAA

Product: cell division protein ZipA

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDADGFDADGIGAVRVRKVGESNP
HETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDFSLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQ
KALEQEKHAQSTTVPTQTALFDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY
GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNSARQLADDIDAVVLD
GQRQPWGEFTKQDYLHRIRANA

Sequences:

>Translated_342_residues
MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDADGFDADGIGAVRVRKVGESNP
HETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDFSLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQ
KALEQEKHAQSTTVPTQTALFDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY
GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNSARQLADDIDAVVLD
GQRQPWGEFTKQDYLHRIRANA
>Mature_342_residues
MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDADGFDADGIGAVRVRKVGESNP
HETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDFSLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQ
KALEQEKHAQSTTVPTQTALFDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY
GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNFSIMLNSARQLADDIDAVVLD
GQRQPWGEFTKQDYLHRIRANA

Specific function: Interacts directly with the cell division protein FtsZ. Probable receptor for the septal ring structure, may anchor it to the inner-membrane [H]

COG id: COG3115

COG function: function code D; Cell division protein

Gene ontology:

Cell location: Cell inner membrane; Single-pass type I membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ZipA family [H]

Homologues:

Organism=Escherichia coli, GI1788752, Length=341, Percent_Identity=34.3108504398827, Blast_Score=145, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011919
- InterPro:   IPR007449
- ProDom:   PD035754 [H]

Pfam domain/function: PF04354 ZipA_C [H]

EC number: NA

Molecular weight: Translated: 38094; Mature: 38094

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
GFDADGIGAVRVRKVGESNPHETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDF
CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCHHHCCCCCCCCC
SLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQKALEQEKHAQSTTVPTQTAL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY
CCCCHHCCCCCCHHHHHHHHHHHCCCCCHHEEEEEEEHHCCCCCCCCCEEEEEEEEEEEE
GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNF
CCHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHH
SIMLNSARQLADDIDAVVLDGQRQPWGEFTKQDYLHRIRANA
HHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MEDLQLVLFILGAIAIVAVLVHGFWSIRRQQPKSLKDSPMGNFYKQQADKESPPKRVDAD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCC
GFDADGIGAVRVRKVGESNPHETPPISPYLKQDVKAEPKPLFKHTTSTEIKQEPVPQPDF
CCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHCCCCCCHHHHCCCCCHHHCCCCCCCCC
SLQSPLATEQQRGAKVSRQEPVLNGHVPPLGQSHAAMVAQKALEQEKHAQSTTVPTQTAL
CCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHH
FDEDAYLENTESEDEYAEETVDEGLDEPRDVLVLHVVAKEGQQLNGAELLPCFLTLNFKY
CCCCHHCCCCCCHHHHHHHHHHHCCCCCHHEEEEEEEHHCCCCCCCCCEEEEEEEEEEEE
GDMNIFHRHVDNAGNGKVLFSIANMLKPGVFDPDNMEQFSTQGVVFFMTLPCYGDALMNF
CCHHHHHHHCCCCCCCEEHHHHHHHHCCCCCCCCCHHHHCCCCEEEEEECCCHHHHHHHH
SIMLNSARQLADDIDAVVLDGQRQPWGEFTKQDYLHRIRANA
HHHHHHHHHHHHHHCEEEECCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA