Definition Shewanella sp. W3-18-1 chromosome, complete genome.
Accession NC_008750
Length 4,708,380

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The map label for this gene is 120598206

Identifier: 120598206

GI number: 120598206

Start: 1573706

End: 1574305

Strand: Direct

Name: 120598206

Synonym: Sputw3181_1383

Alternate gene names: NA

Gene position: 1573706-1574305 (Clockwise)

Preceding gene: 120598205

Following gene: 120598207

Centisome position: 33.42

GC content: 38.0

Gene sequence:

>600_bases
GTGTTGGGAGTTTGTATAACACTATTGTGTGGCAAACTCGAAAACTCATACCGCATAGAGTTGAGAATTAAATTGAATAA
TTATGGTGTAGAACTTCGCGCTGTCGAAATGTGTGATTTACCGCTACTTAGACGTTGGCGTAATCGAGATGATATTCGTT
TACAGATGATGCAAACGGACTATATATCACCGAATCAACAACGCAACTGGTTTGAAAGTATTCAATATCGGAATGACCAA
CAGCATTGGGTTTTATGGTGTAAAGGACAACGAGCAGGCTATGTCAATTTAAAGGGGAATATTTCTGGTGAATTATTTGG
GCAAGATCTTGCTGACGCAGGAATTTATTTAGGTCCGTCACCAGTACGTCACCCAATGCTTGCGGTAGCAGCTGCATTGT
CACAATTAGATTTTGGGTTTGAAACTTTACAAATCAAGGCGATAAGAACATTAGTGAAAACCGATAACCACTCTGCTTTA
AGGCTCAATCAGCAGTTAGGCTATCAAGTATTGTTGAATAAACAAGATTTTATCGCATTAGAATTACTTCCAAGTGATTA
TTTTATTGCACGTGAAAAATTGCGGAGATTTTTTAGATGA

Upstream 100 bases:

>100_bases
ATCTTCGTTCAGTTCGTCCTGGTTTAGGCATTGCTCCAAAATATTTACATCAATTACTCGGTAAAGCCGTCAAACAGGAT
ATTGCAGCAGGTACGGCTAT

Downstream 100 bases:

>100_bases
CCAGATTAGAAGTACTCTTTTCAAACGCATTAGGGCTCGATATTGAAAAGATCCATGATGAATTAGCCTACAACTCTGTA
CCCGAATGGGATAGCGTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MLGVCITLLCGKLENSYRIELRIKLNNYGVELRAVEMCDLPLLRRWRNRDDIRLQMMQTDYISPNQQRNWFESIQYRNDQ
QHWVLWCKGQRAGYVNLKGNISGELFGQDLADAGIYLGPSPVRHPMLAVAAALSQLDFGFETLQIKAIRTLVKTDNHSAL
RLNQQLGYQVLLNKQDFIALELLPSDYFIAREKLRRFFR

Sequences:

>Translated_199_residues
MLGVCITLLCGKLENSYRIELRIKLNNYGVELRAVEMCDLPLLRRWRNRDDIRLQMMQTDYISPNQQRNWFESIQYRNDQ
QHWVLWCKGQRAGYVNLKGNISGELFGQDLADAGIYLGPSPVRHPMLAVAAALSQLDFGFETLQIKAIRTLVKTDNHSAL
RLNQQLGYQVLLNKQDFIALELLPSDYFIAREKLRRFFR
>Mature_199_residues
MLGVCITLLCGKLENSYRIELRIKLNNYGVELRAVEMCDLPLLRRWRNRDDIRLQMMQTDYISPNQQRNWFESIQYRNDQ
QHWVLWCKGQRAGYVNLKGNISGELFGQDLADAGIYLGPSPVRHPMLAVAAALSQLDFGFETLQIKAIRTLVKTDNHSAL
RLNQQLGYQVLLNKQDFIALELLPSDYFIAREKLRRFFR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23249; Mature: 23249

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGVCITLLCGKLENSYRIELRIKLNNYGVELRAVEMCDLPLLRRWRNRDDIRLQMMQTD
CHHHHEEHHHHCCCCCEEEEEEEEEECCCEEEEEEEECCCHHHHHHCCCCCEEEEEEECC
YISPNQQRNWFESIQYRNDQQHWVLWCKGQRAGYVNLKGNISGELFGQDLADAGIYLGPS
CCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCEECCCHHHCCCEEECCC
PVRHPMLAVAAALSQLDFGFETLQIKAIRTLVKTDNHSALRLNQQLGYQVLLNKQDFIAL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHCCEEEEECCCCEEEE
ELLPSDYFIAREKLRRFFR
EECCCCHHHHHHHHHHHCC
>Mature Secondary Structure
MLGVCITLLCGKLENSYRIELRIKLNNYGVELRAVEMCDLPLLRRWRNRDDIRLQMMQTD
CHHHHEEHHHHCCCCCEEEEEEEEEECCCEEEEEEEECCCHHHHHHCCCCCEEEEEEECC
YISPNQQRNWFESIQYRNDQQHWVLWCKGQRAGYVNLKGNISGELFGQDLADAGIYLGPS
CCCCCCCHHHHHHHHCCCCCCEEEEEEECCCCEEEEEECCCCCEECCCHHHCCCEEECCC
PVRHPMLAVAAALSQLDFGFETLQIKAIRTLVKTDNHSALRLNQQLGYQVLLNKQDFIAL
CHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCEEEEHHHCCEEEEECCCCEEEE
ELLPSDYFIAREKLRRFFR
EECCCCHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA