| Definition | Shewanella sp. W3-18-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008750 |
| Length | 4,708,380 |
Click here to switch to the map view.
The map label for this gene is 120598207
Identifier: 120598207
GI number: 120598207
Start: 1574302
End: 1574532
Strand: Direct
Name: 120598207
Synonym: Sputw3181_1384
Alternate gene names: NA
Gene position: 1574302-1574532 (Clockwise)
Preceding gene: 120598206
Following gene: 120598208
Centisome position: 33.44
GC content: 39.83
Gene sequence:
>231_bases ATGACCAGATTAGAAGTACTCTTTTCAAACGCATTAGGGCTCGATATTGAAAAGATCCATGATGAATTAGCCTACAACTC TGTACCCGAATGGGATAGCGTGGCACACATGGGATTAATTGCTCAGCTAGAGGATGCTTATGACGTACTTTTAGATACTG ATGACATTATCGATATGAGTAGTGTTGGTAAAGCGAGGGTGATACTCGCTAAATATGGCGTTAATTCATAA
Upstream 100 bases:
>100_bases TAGGCTATCAAGTATTGTTGAATAAACAAGATTTTATCGCATTAGAATTACTTCCAAGTGATTATTTTATTGCACGTGAA AAATTGCGGAGATTTTTTAG
Downstream 100 bases:
>100_bases TGTCACTATTACGAGGTAAAAAAGCATTAGTAACTGGTGCCAATCGTGGTATCGGCCTAGCTATTGCCCATAAATTTGCT CAGCAAGGTGCTGAATTATG
Product: acyl carrier protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 76; Mature: 75
Protein sequence:
>76_residues MTRLEVLFSNALGLDIEKIHDELAYNSVPEWDSVAHMGLIAQLEDAYDVLLDTDDIIDMSSVGKARVILAKYGVNS
Sequences:
>Translated_76_residues MTRLEVLFSNALGLDIEKIHDELAYNSVPEWDSVAHMGLIAQLEDAYDVLLDTDDIIDMSSVGKARVILAKYGVNS >Mature_75_residues TRLEVLFSNALGLDIEKIHDELAYNSVPEWDSVAHMGLIAQLEDAYDVLLDTDDIIDMSSVGKARVILAKYGVNS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8410; Mature: 8278
Theoretical pI: Translated: 4.01; Mature: 4.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRLEVLFSNALGLDIEKIHDELAYNSVPEWDSVAHMGLIAQLEDAYDVLLDTDDIIDMS CCHHHEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC SVGKARVILAKYGVNS CCCCEEEEEEECCCCC >Mature Secondary Structure TRLEVLFSNALGLDIEKIHDELAYNSVPEWDSVAHMGLIAQLEDAYDVLLDTDDIIDMS CHHHEEECCCCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC SVGKARVILAKYGVNS CCCCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA